Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 9.3e-83 310.1 147 100.0
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 4.2e-59 231.5 157 73.9
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 1.2e-58 229.9 157 73.9
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 1.1e-54 216.9 132 77.3
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 1.7e-52 209.5 163 66.9
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 2.7e-50 202.2 141 65.2
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 4.8e-47 191.4 118 72.0
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 1.4e-46 189.9 155 65.2
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 2.4e-46 189.1 112 72.3
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 7.0e-46 187.6 150 62.7
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 3.4e-45 185.3 150 58.0
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 1.3e-44 183.3 150 57.3
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.7e-44 183.0 124 68.5
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 2.2e-44 182.6 133 64.7
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 6.5e-44 181.0 116 69.0
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 8.5e-44 180.6 120 67.5
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 8.5e-44 180.6 139 60.4
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 1.9e-43 179.5 139 60.4
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 3.2e-43 178.7 118 69.5
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 9.4e-43 177.2 111 71.2
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 2.1e-42 176.0 144 59.0
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 2.7e-42 175.6 149 59.7
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 4.7e-42 174.9 123 65.9
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 1.0e-41 173.7 153 56.9
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 1.4e-41 173.3 148 59.5
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 3.9e-41 171.8 146 57.5
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 6.7e-41 171.0 143 58.7
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 1.1e-40 170.2 146 56.8
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.1e-40 170.2 113 69.9
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 2.0e-40 169.5 130 62.3
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 2.0e-40 169.5 111 67.6
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 3.3e-40 168.7 111 64.9
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 5.7e-40 167.9 147 61.2
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 7.4e-40 167.5 110 71.8
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 9.7e-40 167.2 111 68.5
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 1.7e-39 166.4 111 68.5
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 2.8e-39 165.6 111 65.8
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 2.8e-39 165.6 141 58.9
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 3.7e-39 165.2 111 66.7
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 3.7e-39 165.2 111 66.7
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 3.7e-39 165.2 111 67.6
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 3.7e-39 165.2 111 64.9
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 4.8e-39 164.9 111 68.5
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 4.8e-39 164.9 147 55.8
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 4.8e-39 164.9 146 55.5
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 4.8e-39 164.9 111 67.6
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 6.3e-39 164.5 116 66.4
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 6.3e-39 164.5 111 65.8
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 6.3e-39 164.5 111 65.8
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 6.3e-39 164.5 111 66.7
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 8.2e-39 164.1 111 64.9
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 1.1e-38 163.7 124 65.3
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 1.1e-38 163.7 124 65.3
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.4e-38 163.3 124 65.3
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.8e-38 162.9 111 67.6
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 2.4e-38 162.5 143 52.4
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.4e-38 162.5 143 52.4
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.4e-38 162.5 143 52.4
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 2.4e-38 162.5 111 64.0
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 2.4e-38 162.5 139 56.1
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 4.1e-38 161.8 113 66.4
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 5.3e-38 161.4 141 55.3
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 1.6e-37 159.8 111 65.8
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 1.6e-37 159.8 110 64.5
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 2.0e-37 159.5 111 64.0
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 2.0e-37 159.5 142 55.6
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 2.6e-37 159.1 145 52.4
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 3.5e-37 158.7 111 63.1
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 3.5e-37 158.7 113 61.9
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 5.9e-37 157.9 111 62.2
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 1.7e-36 156.4 111 64.9
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 2.9e-36 155.6 110 64.5
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 3.8e-36 155.2 110 63.6
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 5.0e-36 154.8 110 63.6
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 5.0e-36 154.8 110 64.5
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 5.0e-36 154.8 111 64.0
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 5.0e-36 154.8 146 54.8
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 6.5e-36 154.5 109 66.1
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 1.1e-35 153.7 110 63.6
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 1.1e-35 153.7 110 63.6
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 1.1e-35 153.7 110 63.6
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.1e-35 153.7 111 64.0
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 1.1e-35 153.7 110 63.6
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 1.5e-35 153.3 122 58.2
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 1.5e-35 153.3 143 55.2
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 2.5e-35 152.5 110 61.8
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 1.6e-34 149.8 110 62.7
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 1.6e-34 149.8 110 62.7
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 2.1e-34 149.4 137 53.3
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 2.1e-34 149.4 110 62.7
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 2.7e-34 149.1 135 55.6
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 3.6e-34 148.7 110 61.8
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 4.7e-34 148.3 105 62.9
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 8.0e-34 147.5 111 61.3
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 1.0e-33 147.1 138 51.4
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 2.0e-32 142.9 179 45.8
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 3.3e-32 142.1 115 58.3
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 4.4e-32 141.7 114 57.9
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.2e-31 139.4 131 50.4
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 1.4e-30 136.7 150 46.0
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 9.1e-30 134.0 97 61.9
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.2e-29 133.7 97 61.9
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 5.9e-29 131.3 110 52.7
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 1.3e-28 130.2 106 54.7
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 1.5e-27 126.7 120 44.2
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 2.8e-23 112.5 110 48.2
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 2.9e-20 102.4 101 47.5
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 3.3e-19 99.0 97 44.3
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 5.5e-19 98.2 53 84.9
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 5.2e-17 91.7 113 44.2
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 1.2e-16 90.5 65 64.6
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.5e-16 90.1 53 71.7
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 2.0e-16 89.7 53 71.7
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 1.1e-14 84.0 51 70.6
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.1e-14 84.0 91 49.5
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 9.2e-14 80.9 50 70.0
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 2.0e-13 79.7 50 68.0
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 2.9e-12 75.9 48 66.7
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 6.6e-12 74.7 56 57.1
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 8.0e-10 67.8 45 62.2
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 3.1e-09 65.9 48 58.3
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 1.3e-07 60.5 100 39.0
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 6.4e-07 58.2 72 37.5


User provided reference genes

Program Settings