Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 1.7e-152 542.7 286 100.0
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 2.7e-62 243.0 164 80.5
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.1e-58 231.1 167 75.4
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 1.1e-58 231.1 165 76.4
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 1.8e-58 230.3 165 75.8
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 4.1e-58 229.2 164 75.0
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 9.0e-58 228.0 164 76.2
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 2.0e-57 226.9 164 75.6
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 3.4e-57 226.1 164 75.0
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 5.9e-57 225.3 164 73.2
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 5.9e-57 225.3 164 75.0
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 5.9e-57 225.3 164 73.2
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 1.0e-56 224.6 165 73.9
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 1.0e-56 224.6 165 73.9
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.7e-56 223.8 165 73.3
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.7e-56 223.8 164 73.8
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 2.2e-56 223.4 164 72.0
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 2.9e-56 223.0 165 73.3
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 3.8e-56 222.6 165 73.9
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 6.5e-56 221.9 165 73.9
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 8.5e-56 221.5 168 75.0
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 1.1e-55 221.1 164 72.0
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.1e-55 221.1 166 73.5
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 1.9e-55 220.3 169 71.6
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 1.9e-55 220.3 168 74.4
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 2.5e-55 219.9 166 71.7
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 2.5e-55 219.9 165 72.7
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 4.2e-55 219.2 164 70.1
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 5.5e-55 218.8 165 73.3
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 9.3e-55 218.0 164 70.7
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 1.2e-54 217.6 161 72.0
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 1.2e-54 217.6 164 70.7
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.6e-54 217.2 166 73.5
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 1.6e-54 217.2 164 70.7
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 1.6e-54 217.2 165 72.1
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 2.1e-54 216.9 164 70.1
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 2.7e-54 216.5 166 69.3
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 2.7e-54 216.5 165 70.9
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 2.7e-54 216.5 165 70.9
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 3.6e-54 216.1 164 69.5
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 4.6e-54 215.7 166 69.3
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 4.6e-54 215.7 165 70.9
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 6.1e-54 215.3 165 70.9
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 6.1e-54 215.3 165 70.3
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 6.1e-54 215.3 164 70.1
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 7.9e-54 214.9 167 70.1
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 7.9e-54 214.9 166 70.5
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 1.8e-53 213.8 165 70.9
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.8e-53 213.8 166 69.3
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 2.3e-53 213.4 165 72.1
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 2.3e-53 213.4 163 71.2
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 2.3e-53 213.4 168 68.5
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 3.9e-53 212.6 166 68.1
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 3.9e-53 212.6 167 69.5
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 8.7e-53 211.5 159 70.4
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.1e-52 211.1 164 68.9
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 1.9e-52 210.3 165 69.7
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 1.9e-52 210.3 163 70.6
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.5e-52 209.9 166 68.1
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.5e-52 209.9 166 68.1
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 3.3e-52 209.5 164 70.1
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 3.3e-52 209.5 164 70.1
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 3.3e-52 209.5 167 69.5
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 3.3e-52 209.5 165 68.5
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 4.3e-52 209.1 165 67.9
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 4.3e-52 209.1 164 70.1
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 5.7e-52 208.8 160 68.8
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 7.4e-52 208.4 166 68.7
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 7.4e-52 208.4 164 69.5
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 7.4e-52 208.4 164 67.7
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 7.4e-52 208.4 164 67.7
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 7.4e-52 208.4 165 69.7
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 9.7e-52 208.0 165 69.1
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 9.7e-52 208.0 163 69.9
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 1.3e-51 207.6 161 71.4
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.3e-51 207.6 169 66.3
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 1.6e-51 207.2 166 69.3
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 2.2e-51 206.8 166 68.1
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 2.8e-51 206.5 166 68.7
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 3.7e-51 206.1 166 68.7
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 3.7e-51 206.1 166 68.1
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 3.7e-51 206.1 167 70.7
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 4.8e-51 205.7 166 69.3
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 4.8e-51 205.7 166 68.7
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 4.8e-51 205.7 164 68.9
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 6.3e-51 205.3 165 66.7
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 8.2e-51 204.9 169 68.0
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 8.2e-51 204.9 165 66.1
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 8.2e-51 204.9 165 66.1
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 8.2e-51 204.9 165 66.1
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 8.2e-51 204.9 164 68.3
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.4e-50 204.1 164 67.7
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 2.4e-50 203.4 168 69.6
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 2.4e-50 203.4 167 65.9
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 3.1e-50 203.0 164 65.2
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 4.1e-50 202.6 166 66.3
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 4.1e-50 202.6 169 66.9
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 5.3e-50 202.2 166 67.5
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 6.9e-50 201.8 167 66.5
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 6.9e-50 201.8 166 65.7
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 6.9e-50 201.8 167 66.5
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 6.9e-50 201.8 166 65.7
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 6.9e-50 201.8 167 66.5
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 6.9e-50 201.8 164 67.1
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 6.9e-50 201.8 165 66.1
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 1.2e-49 201.1 164 67.1
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 2.0e-49 200.3 162 69.1
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 2.0e-49 200.3 165 69.1
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 2.6e-49 199.9 153 70.6
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 4.5e-49 199.1 169 63.9
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 4.5e-49 199.1 165 67.3
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 5.9e-49 198.7 165 68.5
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 1.0e-48 198.0 170 70.6
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 1.3e-48 197.6 169 65.7
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 1.3e-48 197.6 169 65.1
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 1.3e-48 197.6 167 67.1
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 1.3e-48 197.6 167 65.3
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 2.2e-48 196.8 160 63.8
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.2e-48 196.8 164 64.6
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 2.2e-48 196.8 164 67.7
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 2.9e-48 196.4 164 65.2
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 3.8e-48 196.1 164 66.5
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 3.8e-48 196.1 170 65.3
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 5.0e-48 195.7 165 64.2
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 5.0e-48 195.7 169 65.1
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 5.0e-48 195.7 169 65.1
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 5.0e-48 195.7 169 65.1
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 6.5e-48 195.3 165 63.6
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.4e-47 194.1 153 68.6
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 3.2e-47 193.0 161 64.0
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.2e-46 191.0 166 65.7
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 1.2e-46 191.0 167 62.3
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 6.7e-45 185.3 166 62.0
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 6.7e-45 185.3 168 64.3
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 6.7e-45 185.3 168 64.3
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 1.7e-43 180.6 164 59.8
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 1.7e-43 180.6 168 61.9
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 2.4e-42 176.8 164 63.4
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 4.5e-41 172.6 99 82.8
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 4.5e-41 172.6 99 81.8
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 1.0e-40 171.4 143 67.8
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 1.1e-39 167.9 100 77.0
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 1.6e-38 164.1 165 60.0
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 3.0e-37 159.8 164 59.8
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 2.0e-36 157.1 170 53.5
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 5.7e-36 155.6 97 75.3
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.4e-34 151.0 168 52.4
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 1.0e-32 144.8 143 60.1
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 3.8e-32 142.9 166 49.4
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 4.2e-31 139.4 170 48.8
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 3.0e-29 133.3 172 45.9
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 8.8e-29 131.7 215 42.8
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 7.5e-28 128.6 166 45.8
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 8.2e-27 125.2 143 52.4
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 4.5e-25 119.4 126 51.6
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.9e-24 116.7 70 77.1
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 8.5e-24 115.2 70 75.7
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 3.6e-22 109.8 170 45.9
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 4.7e-22 109.4 175 44.6
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 1.8e-21 107.5 168 46.4
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 4.0e-21 106.3 164 40.2
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.1e-18 98.2 68 69.1
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.2e-16 90.5 75 58.7
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 1.5e-12 77.8 41 85.4
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 5.6e-07 59.3 68 64.7


User provided reference genes

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