Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 4.8e-137 491.1 242 100.0
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 9.9e-90 334.0 230 70.4
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 7.8e-87 324.3 224 70.1
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 1.0e-86 323.9 230 68.3
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 1.3e-86 323.6 226 71.2
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 3.0e-86 322.4 243 66.3
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 1.5e-85 320.1 237 65.8
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 4.3e-85 318.5 242 64.9
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 5.6e-85 318.2 214 68.2
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 5.6e-85 318.2 194 76.8
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 1.3e-84 317.0 235 66.0
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 6.2e-84 314.7 213 70.4
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.1e-83 313.9 224 67.0
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 2.4e-83 312.8 210 69.0
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 9.0e-83 310.8 235 65.1
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 2.6e-82 309.3 210 69.5
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 5.8e-82 308.1 225 66.7
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 7.6e-82 307.8 231 64.5
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.3e-81 307.0 242 62.8
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.7e-81 306.6 217 65.9
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 2.2e-81 306.2 214 67.3
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 2.9e-81 305.8 221 65.6
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 2.9e-81 305.8 244 60.7
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 4.9e-81 305.1 218 67.9
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 4.9e-81 305.1 214 66.4
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 4.9e-81 305.1 214 66.4
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 6.4e-81 304.7 230 64.8
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 8.4e-81 304.3 220 68.2
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 8.4e-81 304.3 231 66.2
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 8.4e-81 304.3 201 71.6
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 1.9e-80 303.1 229 63.3
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 2.4e-80 302.8 236 62.7
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 3.2e-80 302.4 227 65.6
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 4.2e-80 302.0 232 62.5
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 5.4e-80 301.6 217 65.4
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 1.6e-79 300.1 195 70.8
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 2.7e-79 299.3 215 65.6
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 6.0e-79 298.1 204 70.1
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 6.0e-79 298.1 206 68.0
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 7.9e-79 297.7 234 60.7
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 1.3e-78 297.0 251 58.6
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 1.7e-78 296.6 195 70.3
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 3.0e-78 295.8 222 64.4
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 3.0e-78 295.8 225 64.0
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 5.1e-78 295.0 224 64.3
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 1.9e-77 293.1 191 72.3
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 4.3e-77 292.0 198 69.2
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 9.6e-77 290.8 224 63.8
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 1.3e-76 290.4 229 60.3
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 3.6e-76 288.9 191 70.7
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 4.8e-76 288.5 207 66.7
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 4.8e-76 288.5 198 66.7
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 6.2e-76 288.1 191 71.2
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 1.1e-75 287.3 191 70.2
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.8e-75 286.6 191 71.2
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 5.3e-75 285.0 203 70.0
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 9.0e-75 284.3 195 67.7
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 2.0e-74 283.1 190 70.0
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 2.6e-74 282.7 190 69.5
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 2.6e-74 282.7 191 69.6
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 4.5e-74 282.0 183 71.0
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 5.8e-74 281.6 241 56.8
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 9.9e-74 280.8 195 66.7
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 2.4e-72 276.2 201 65.7
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 1.6e-71 273.5 195 63.6
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 3.0e-70 269.2 204 62.3
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 1.5e-69 266.9 172 73.8
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 1.6e-68 263.5 244 57.8
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 6.2e-68 261.5 207 64.7
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 4.5e-66 255.4 200 62.0
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 1.6e-63 246.9 200 61.0
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 3.0e-62 242.7 214 54.2
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 3.9e-62 242.3 191 62.3
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 2.1e-60 236.5 192 58.3
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.7e-57 226.9 208 51.9
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 6.5e-57 224.9 188 57.4
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 7.9e-55 218.0 220 53.6
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 1.8e-54 216.9 160 62.5
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 2.5e-53 213.0 176 59.7
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 2.2e-52 209.9 187 59.4
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 3.8e-49 199.1 136 69.9
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 3.0e-46 189.5 215 47.0
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.0e-45 186.8 136 66.2
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 4.3e-45 185.7 213 45.5
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 7.2e-40 168.3 121 67.8
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 8.2e-36 154.8 97 68.0
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 3.6e-31 139.4 199 42.7
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 3.0e-30 136.3 169 43.2
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 3.0e-30 136.3 116 61.2
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.2e-28 130.2 116 57.8
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 4.5e-26 122.5 83 71.1
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 3.8e-25 119.4 140 50.7
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.1e-24 117.9 80 67.5
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 5.2e-14 82.4 44 86.4
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 2.0e-13 80.5 113 46.0
PRCOL_00002242 Prasinoderma coloniale HOM05D060700 ORTHO05D009694 8.0e-07 58.5 159 32.1


User provided reference genes

Program Settings