Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 1.0e-176 624.4 689 100.0
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 7.7e-87 325.9 308 67.9
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 8.0e-76 289.3 314 63.4
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 2.9e-70 270.8 483 60.0
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 3.5e-63 247.3 276 60.1
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 4.2e-61 240.4 442 63.8
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 1.3e-57 228.8 259 61.0
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 6.3e-57 226.5 445 55.1
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 8.3e-57 226.1 278 59.0
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 1.1e-56 225.7 436 62.2
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 1.4e-56 225.3 291 57.0
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 2.4e-56 224.6 295 55.9
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 9.1e-56 222.6 290 54.1
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 9.1e-56 222.6 257 61.9
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 1.2e-55 222.2 437 68.0
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 1.2e-55 222.2 424 50.0
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 2.0e-55 221.5 424 56.4
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 2.7e-55 221.1 455 57.6
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 2.7e-55 221.1 295 55.3
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 4.5e-55 220.3 474 40.9
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 5.9e-55 219.9 295 55.6
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 1.7e-54 218.4 430 49.3
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 2.9e-54 217.6 444 65.8
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 2.9e-54 217.6 428 68.5
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 2.9e-54 217.6 271 58.3
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 2.9e-54 217.6 292 56.2
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 5.0e-54 216.9 465 63.9
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 5.0e-54 216.9 284 55.6
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 5.0e-54 216.9 253 61.7
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 6.5e-54 216.5 449 60.8
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.1e-53 215.7 284 55.3
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 1.5e-53 215.3 446 61.4
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 2.5e-53 214.5 537 61.6
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 5.5e-53 213.4 274 56.2
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 5.5e-53 213.4 294 53.7
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 9.5e-53 212.6 424 51.9
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 1.6e-52 211.8 473 59.6
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 2.1e-52 211.5 489 57.1
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 4.7e-52 210.3 259 57.9
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 8.0e-52 209.5 447 65.3
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 3.0e-51 207.6 257 58.8
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 4.0e-51 207.2 275 54.5
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 6.8e-51 206.5 300 51.7
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 5.7e-50 203.4 428 41.1
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 3.7e-49 200.7 273 54.2
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 6.3e-49 199.9 262 55.3
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 1.1e-48 199.1 296 51.4
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 1.1e-48 199.1 296 51.4
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 3.1e-48 197.6 410 68.8
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 7.0e-48 196.4 255 56.9
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 1.2e-47 195.7 254 58.7
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 1.6e-47 195.3 422 57.6
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 7.8e-47 193.0 273 52.7
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 1.0e-46 192.6 430 54.4
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 1.0e-46 192.6 258 57.0
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 1.3e-46 192.2 254 59.1
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 1.7e-46 191.8 254 59.1
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 1.7e-46 191.8 266 55.6
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 2.3e-46 191.4 254 58.7
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 2.3e-46 191.4 309 50.2
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 3.8e-46 190.7 254 57.1
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 3.8e-46 190.7 254 58.7
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 3.8e-46 190.7 254 58.7
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 5.0e-46 190.3 254 59.1
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 1.5e-45 188.7 467 53.5
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 1.9e-45 188.3 254 59.1
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 1.9e-45 188.3 254 56.7
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 3.3e-45 187.6 430 60.2
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 5.6e-45 186.8 438 54.1
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 5.6e-45 186.8 254 57.5
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 2.1e-44 184.9 271 54.2
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 2.1e-44 184.9 441 30.2
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 3.6e-44 184.1 282 53.9
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 4.0e-43 180.6 264 55.7
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 5.8e-42 176.8 386 52.1
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 4.9e-41 173.7 458 64.8
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 3.2e-40 171.0 386 45.1
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 6.0e-39 166.8 235 52.3
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 5.0e-38 163.7 288 50.3
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 2.1e-36 158.3 218 59.2
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 2.0e-34 151.8 213 57.7
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 2.2e-33 148.3 224 57.1
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 6.4e-33 146.7 211 58.3
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 1.2e-31 142.5 206 57.8
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 1.6e-31 142.1 211 56.9
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 2.1e-31 141.7 207 58.0
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 2.1e-31 141.7 144 48.6
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 2.7e-31 141.4 207 58.5
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 2.7e-31 141.4 387 55.8
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 1.7e-30 138.7 427 35.6
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 1.7e-30 138.7 211 56.9
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 2.5e-29 134.8 148 45.3
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 3.4e-26 124.4 257 48.6
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 4.4e-26 124.0 205 54.1
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 5.8e-26 123.6 205 54.1
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 1.3e-25 122.5 205 53.7
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 1.6e-23 115.5 278 46.0
QL11p014441 Quercus lobata HOM05D006707 ORTHO05D008243 2.0e-18 98.6 85 52.9
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 4.9e-17 94.0 253 45.1
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 7.3e-13 80.1 51 66.7
RhsimUnG0220500 Rhododendron simsii HOM05D006707 ORTHO05D008243 7.3e-13 80.1 51 66.7
Lj5P156T63 Lonicera japonica HOM05D006707 ORTHO05D008243 9.6e-13 79.7 51 68.6
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 3.1e-11 74.7 411 21.7
Ciclev10024364m.g Citrus clementina HOM05D006707 ORTHO05D008243 1.5e-10 72.4 66 50.0
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 1.5e-10 72.4 238 26.1
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 3.8e-09 67.8 157 27.4
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 3.2e-08 64.7 62 46.8
MELO3C017354.2 Cucumis melo HOM05D006707 ORTHO05D008243 5.4e-08 63.9 41 65.9
arahy.Tifrunner.gnm1.ann1.1F7K7B Arachis hypogaea HOM05D006707 ORTHO05D008243 9.3e-08 63.2 47 59.6
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 4.6e-07 60.8 49 63.3
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 7.8e-07 60.1 56 48.2
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 7.8e-07 60.1 56 48.2
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 2.3e-06 58.5 116 31.9
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 3.9e-06 57.8 111 32.4
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 3.9e-06 57.8 111 32.4
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 6.6e-06 57.0 111 32.4


User provided reference genes

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