Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 4.0e-93 344.7 174 100.0
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 1.3e-59 233.4 172 66.9
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 5.5e-58 228.0 172 65.7
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 3.6e-49 198.7 152 65.8
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 8.0e-49 197.6 161 62.7
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 7.4e-47 191.0 170 58.2
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 3.7e-46 188.7 170 58.2
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 4.8e-46 188.3 170 55.9
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 8.2e-46 187.6 152 63.8
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 8.2e-46 187.6 170 57.1
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 2.4e-45 186.0 170 54.7
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 4.1e-45 185.3 172 56.4
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 5.3e-45 184.9 153 62.1
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 7.0e-45 184.5 135 69.6
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.6e-44 183.3 153 60.8
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 2.0e-44 183.0 137 66.4
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 2.6e-44 182.6 170 59.4
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 4.5e-44 181.8 173 57.2
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 1.7e-43 179.9 184 53.8
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 2.2e-43 179.5 163 58.3
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 5.0e-43 178.3 127 67.7
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 6.5e-43 177.9 171 56.1
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 6.5e-43 177.9 127 67.7
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 6.5e-43 177.9 128 69.5
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 6.5e-43 177.9 150 62.0
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 8.5e-43 177.6 139 65.5
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 1.5e-42 176.8 147 65.3
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 2.5e-42 176.0 117 71.8
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 2.5e-42 176.0 144 63.2
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 3.2e-42 175.6 167 59.3
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 7.2e-42 174.5 163 54.6
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 9.4e-42 174.1 167 57.5
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 1.6e-41 173.3 150 61.3
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 1.6e-41 173.3 117 70.1
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.6e-41 173.3 168 54.2
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 1.6e-41 173.3 145 62.8
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 2.1e-41 172.9 117 70.1
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 2.1e-41 172.9 117 70.1
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 2.1e-41 172.9 115 73.0
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 2.7e-41 172.6 163 56.4
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 3.6e-41 172.2 171 53.2
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 3.6e-41 172.2 118 71.2
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 4.7e-41 171.8 117 69.2
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 4.7e-41 171.8 127 66.9
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 8.0e-41 171.0 131 66.4
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 8.0e-41 171.0 160 57.5
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 1.0e-40 170.6 120 69.2
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 2.3e-40 169.5 169 56.2
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 2.3e-40 169.5 118 70.3
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 3.0e-40 169.1 118 68.6
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 4.0e-40 168.7 143 60.1
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 4.0e-40 168.7 163 53.4
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 4.0e-40 168.7 128 67.2
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 6.7e-40 167.9 167 54.5
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 6.7e-40 167.9 169 53.3
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 6.7e-40 167.9 126 68.3
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 1.2e-39 167.2 167 54.5
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 1.2e-39 167.2 164 55.5
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 2.0e-39 166.4 169 54.4
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 2.0e-39 166.4 134 63.4
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 2.6e-39 166.0 134 63.4
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 5.7e-39 164.9 111 70.3
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 5.7e-39 164.9 164 56.7
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 7.5e-39 164.5 155 56.1
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 1.3e-38 163.7 108 72.2
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 1.7e-38 163.3 117 65.0
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 2.2e-38 162.9 124 65.3
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 2.8e-38 162.5 162 51.9
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 8.2e-38 161.0 135 60.7
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 1.4e-37 160.2 125 64.8
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 1.8e-37 159.8 131 61.1
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.0e-36 156.4 110 66.4
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 2.7e-36 156.0 109 68.8
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 1.0e-35 154.1 99 73.7
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 1.0e-35 154.1 108 64.8
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 1.0e-35 154.1 165 52.1
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 1.3e-35 153.7 141 56.0
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 1.3e-35 153.7 166 51.2
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 1.3e-35 153.7 137 58.4
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 3.8e-35 152.1 167 48.5
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 3.8e-35 152.1 108 69.4
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 1.5e-34 150.2 146 56.8
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 3.2e-34 149.1 146 52.1
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 4.2e-34 148.7 100 70.0
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 7.2e-34 147.9 141 53.9
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 3.6e-33 145.6 99 71.7
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.6e-33 145.6 98 69.4
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.6e-33 145.6 98 69.4
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 6.1e-33 144.8 186 44.6
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 6.8e-32 141.4 152 52.0
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.2e-31 140.6 99 70.7
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 2.0e-31 139.8 170 46.5
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 7.5e-31 137.9 115 59.1
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 8.3e-30 134.4 86 72.1
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.1e-29 134.0 104 63.5
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 7.0e-29 131.3 121 55.4
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 5.0e-27 125.2 96 61.5
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 2.0e-12 76.6 73 52.1
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.5e-10 70.5 84 53.6
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 5.6e-10 68.6 103 33.0
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 1.5e-07 60.5 139 30.9
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 7.5e-07 58.2 38 68.4
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 7.5e-07 58.2 38 68.4
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 1.3e-06 57.4 68 44.1


User provided reference genes

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