Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08509 Striga asiatica HOM05D006877 ORTHO05D008735 0.0e+00 1256.1 1123 100.0
MSTRG.8575 Avicennia marina HOM05D006877 ORTHO05D008735 2.1e-171 607.4 763 71.4
Migut.F00097 Erythranthe guttata HOM05D006877 ORTHO05D008735 4.1e-162 576.6 753 70.8
Oeu060385.2 Olea europaea HOM05D006877 ORTHO05D008735 1.8e-154 551.2 763 67.4
Dinv17258 Davidia involucrata HOM05D006877 ORTHO05D008735 1.0e-144 518.8 766 61.7
SalBow4G0068 Salvia bowleyana HOM05D006877 ORTHO05D008735 1.8e-141 508.1 746 66.1
Lalb_Chr13g0294611 Lupinus albus HOM05D006877 ORTHO05D008735 3.1e-138 497.3 761 59.7
Atru.chr12.1962 Acer truncatum HOM05D006877 ORTHO05D008735 3.2e-135 487.3 755 61.6
SalBow4G3121 Salvia bowleyana HOM05D006877 ORTHO05D008735 1.2e-134 485.3 746 64.9
Hma1.2p1_0758F.1_g213710 Hydrangea macrophylla HOM05D006877 ORTHO05D008735 4.7e-134 483.4 774 62.1
DCAR_020407 Daucus carota HOM05D006877 ORTHO05D008735 8.0e-134 482.6 771 52.0
TWI39G0452 Tripterygium wilfordii HOM05D006877 ORTHO05D008735 2.3e-133 481.1 772 57.9
TAR381G0744 Trochodendron aralioides HOM05D006877 ORTHO05D008735 5.2e-133 479.9 757 58.4
RcHm_v2.0_Chr1g0384191 Rosa chinensis HOM05D006877 ORTHO05D008735 8.8e-133 479.2 744 61.8
Prupe.2G325900 Prunus persica HOM05D006877 ORTHO05D008735 9.8e-132 475.7 717 59.8
CSS0011113 Camellia sinensis var. sinensis HOM05D006877 ORTHO05D008735 3.7e-131 473.8 769 63.5
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 4.8e-131 473.4 765 62.1
QL09p024038 Quercus lobata HOM05D006877 ORTHO05D008735 5.9e-129 466.5 762 62.3
GSVIVG01024409001 Vitis vinifera HOM05D006877 ORTHO05D008735 1.3e-128 465.3 756 54.2
Ciclev10018634m.g Citrus clementina HOM05D006877 ORTHO05D008735 6.5e-128 463.0 731 62.4
VMungo0251G1190 Vigna mungo HOM05D006877 ORTHO05D008735 6.5e-128 463.0 759 57.3
Actinidia18704 Actinidia chinensis HOM05D006877 ORTHO05D008735 1.8e-125 454.9 763 58.3
Lj4g0001495 Lotus japonicus HOM05D006877 ORTHO05D008735 4.0e-125 453.8 757 61.6
PSO063G6761 Papaver somniferum HOM05D006877 ORTHO05D008735 5.2e-125 453.4 755 58.1
Manes.09G127200 Manihot esculenta HOM05D006877 ORTHO05D008735 1.5e-124 451.8 752 62.0
FAN03G2267 Fragaria x ananassa HOM05D006877 ORTHO05D008735 3.4e-124 450.7 748 61.6
MD01G1235800 Malus domestica HOM05D006877 ORTHO05D008735 3.4e-124 450.7 716 59.9
Aqoxy3G02132 Aquilegia oxysepala HOM05D006877 ORTHO05D008735 6.3e-123 446.4 763 59.4
Duzib106G0107 Durio zibethinus HOM05D006877 ORTHO05D008735 1.1e-122 445.7 768 60.7
Medtr8g080940 Medicago truncatula HOM05D006877 ORTHO05D008735 3.1e-122 444.1 752 62.1
Glyma.08G106500 Glycine max HOM05D006877 ORTHO05D008735 2.0e-121 441.4 766 60.6
ECA246G2862 Erigeron canadensis HOM05D006877 ORTHO05D008735 1.5e-119 435.3 762 59.4
Sabra19G0059000 Salix brachista HOM05D006877 ORTHO05D008735 9.5e-119 432.6 747 58.0
Ah.04g156540 Amaranthus hybridus HOM05D006877 ORTHO05D008735 4.7e-118 430.3 762 57.9
arahy.Tifrunner.gnm1.ann1.G9QUK2 Arachis hypogaea HOM05D006877 ORTHO05D008735 1.4e-117 428.7 765 59.3
Gohir.D08G242601 Gossypium hirsutum HOM05D006877 ORTHO05D008735 1.8e-117 428.3 754 60.3
Gorai.004G258300 Gossypium raimondii HOM05D006877 ORTHO05D008735 3.0e-117 427.6 756 60.3
EL10Ac3g05079 Beta vulgaris HOM05D006877 ORTHO05D008735 4.0e-117 427.2 766 58.5
CARHR185880 Cardamine hirsuta HOM05D006877 ORTHO05D008735 1.2e-116 425.6 760 55.9
Gohir.A08G221900 Gossypium hirsutum HOM05D006877 ORTHO05D008735 1.2e-116 425.6 756 59.8
MBI04_g20982_MAGBIO Magnolia biondii HOM05D006877 ORTHO05D008735 1.5e-116 425.2 756 59.4
Potri.019G049400 Populus trichocarpa HOM05D006877 ORTHO05D008735 1.5e-116 425.2 744 57.7
arahy.Tifrunner.gnm1.ann1.VTBJ7F Arachis hypogaea HOM05D006877 ORTHO05D008735 2.0e-116 424.9 764 58.9
PGSC0003DMG400003143 Solanum tuberosum HOM05D006877 ORTHO05D008735 9.8e-116 422.5 747 62.0
Psat7g076160 Pisum sativum HOM05D006877 ORTHO05D008735 4.9e-115 420.2 762 59.4
CANSAT21G1458 Cannabis sativa HOM05D006877 ORTHO05D008735 6.4e-115 419.9 732 60.9
Eucgr.A02969 Eucalyptus grandis HOM05D006877 ORTHO05D008735 9.2e-114 416.0 743 60.7
FAN01G1958 Fragaria x ananassa HOM05D006877 ORTHO05D008735 1.2e-113 415.6 787 59.1
THA.LOC104821701 Tarenaya hassleriana HOM05D006877 ORTHO05D008735 2.0e-113 414.8 759 59.3
Thhalv10003569m.g Eutrema salsugineum HOM05D006877 ORTHO05D008735 1.0e-112 412.5 731 59.5
Aa31LG11G9010 Aethionema arabicum HOM05D006877 ORTHO05D008735 3.9e-112 410.6 767 54.6
FAN10G2126 Fragaria x ananassa HOM05D006877 ORTHO05D008735 3.9e-112 410.6 771 59.7
Nitab4.5_0011357g0010 Nicotiana tabacum HOM05D006877 ORTHO05D008735 1.1e-111 409.1 764 60.2
PGR042G1249 Punica granatum HOM05D006877 ORTHO05D008735 2.5e-111 407.9 708 61.4
Sc25g0001210 Simmondsia chinensis HOM05D006877 ORTHO05D008735 4.3e-111 407.1 735 53.1
Sed0012706 Sechium edule HOM05D006877 ORTHO05D008735 5.6e-111 406.8 770 58.4
Ca_18009_v3 Cicer arietinum L. HOM05D006877 ORTHO05D008735 2.1e-110 404.8 762 58.1
Sp2g20510 Schrenkiella parvula HOM05D006877 ORTHO05D008735 4.7e-110 403.7 760 54.9
Nitab4.5_0000021g0490 Nicotiana tabacum HOM05D006877 ORTHO05D008735 6.2e-110 403.3 764 60.6
BraA06t26685Z Brassica rapa HOM05D006877 ORTHO05D008735 1.1e-109 402.5 787 54.5
Sopen03g027750 Solanum pennellii HOM05D006877 ORTHO05D008735 1.8e-109 401.7 751 60.5
A06p37650 Brassica napus HOM05D006877 ORTHO05D008735 3.1e-109 401.0 787 54.8
C07p40570 Brassica napus HOM05D006877 ORTHO05D008735 1.2e-108 399.1 771 54.9
Nn1g01910 Nelumbo nucifera HOM05D006877 ORTHO05D008735 2.0e-108 398.3 747 60.0
Solyc03g097000.3 Solanum lycopersicum HOM05D006877 ORTHO05D008735 4.4e-108 397.1 752 60.5
Lj1A1033T71 Lonicera japonica HOM05D006877 ORTHO05D008735 1.3e-107 395.6 707 61.7
BolC7t44594H Brassica oleracea HOM05D006877 ORTHO05D008735 2.2e-107 394.8 786 53.7
Peaxi162Scf00745g00840 Petunia axillaris HOM05D006877 ORTHO05D008735 1.1e-106 392.5 745 60.8
Lsat_1_v5_gn_3_600 Lactuca sativa HOM05D006877 ORTHO05D008735 9.2e-106 389.4 768 54.3
Cc03_g15580 Coffea canephora HOM05D006877 ORTHO05D008735 1.6e-105 388.7 788 58.2
HanXRQChr01g0027911 Helianthus annuus HOM05D006877 ORTHO05D008735 3.5e-105 387.5 770 58.4
AL6G39840 Arabidopsis lyrata HOM05D006877 ORTHO05D008735 4.6e-105 387.1 762 51.4
Rhsim09G0212700 Rhododendron simsii HOM05D006877 ORTHO05D008735 1.5e-103 382.1 753 55.9
TPR.G11966 Trifolium pratense HOM05D006877 ORTHO05D008735 2.5e-103 381.3 853 53.6
MELO3C024733.2 Cucumis melo HOM05D006877 ORTHO05D008735 4.3e-103 380.6 753 58.7
CAN.G1131.10 Capsicum annuum HOM05D006877 ORTHO05D008735 3.1e-101 374.4 752 59.0
CsaV3_6G010140 Cucumis sativus L. HOM05D006877 ORTHO05D008735 1.4e-98 365.5 767 57.1
ClCG02G007690 Citrullus lanatus HOM05D006877 ORTHO05D008735 3.9e-96 357.5 784 56.1
AUR62002061 Chenopodium quinoa HOM05D006877 ORTHO05D008735 1.4e-90 339.0 263 66.9
COL.COLO4_11806 Corchorus olitorius HOM05D006877 ORTHO05D008735 1.6e-89 335.5 751 50.1
ATR0829G170 Amborella trichopoda HOM05D006877 ORTHO05D008735 9.3e-82 309.7 696 52.9
CDE03G0296 Ceratophyllum demersum HOM05D006877 ORTHO05D008735 2.7e-73 281.6 649 56.4
Hund27367 Selenicereus undatus HOM05D006877 ORTHO05D008735 2.6e-68 265.0 767 52.5
FvH4_7g33960 Fragaria vesca HOM05D006877 ORTHO05D008735 1.8e-64 252.3 546 60.4
AUR62028175 Chenopodium quinoa HOM05D006877 ORTHO05D008735 1.1e-61 243.0 159 74.8
Phvul.003G065400 Phaseolus vulgaris HOM05D006877 ORTHO05D008735 5.3e-61 240.7 543 56.4
Zm00001eb378980 Zea mays HOM05D006877 ORTHO05D008735 4.2e-58 231.1 700 49.1
AT5G27270 Arabidopsis thaliana HOM05D006877 ORTHO05D008735 1.3e-56 226.1 531 56.7
Os06g0111300 Oryza sativa ssp. japonica HOM05D006877 ORTHO05D008735 3.0e-56 224.9 194 55.7
Thecc.05G213300 Theobroma cacao HOM05D006877 ORTHO05D008735 2.6e-52 211.8 540 57.0
Cpa.g.sc39.73 Carica papaya HOM05D006877 ORTHO05D008735 3.4e-52 211.5 271 43.9
CiPaw.05G220200 Carya illinoinensis HOM05D006877 ORTHO05D008735 3.9e-48 198.0 291 41.6
Carub.0006s2526 Capsella rubella HOM05D006877 ORTHO05D008735 5.1e-48 197.6 562 56.4
Pp3c17_13520 Physcomitrium patens HOM05D006877 ORTHO05D008735 7.7e-44 183.7 203 50.7
vmacro22171 Vaccinium macrocarpon HOM05D006877 ORTHO05D008735 3.9e-40 171.4 553 27.5
HPP92_012823 Vanilla planifolia HOM05D006877 ORTHO05D008735 2.0e-39 169.1 583 48.7
Mapoly0001s0556 Marchantia polymorpha HOM05D006877 ORTHO05D008735 3.4e-36 158.3 215 41.4
SEGI_02928 Sequoiadendron giganteum HOM05D006877 ORTHO05D008735 7.4e-31 140.6 573 53.1
SMO203G0003 Selaginella moellendorffii HOM05D006877 ORTHO05D008735 2.0e-23 115.9 188 38.3
vmacro22170 Vaccinium macrocarpon HOM05D006877 ORTHO05D008735 2.5e-18 99.0 84 59.5
CDE06G2178 Ceratophyllum demersum HOM05D006877 ORTHO05D008735 4.0e-16 91.7 155 36.1
BcaNung02478 Brassica carinata HOM05D000721 ORTHO05D001990 2.0e-15 89.4 145 36.6
Cc01_g05460 Coffea canephora HOM05D006877 ORTHO05D008735 2.6e-15 89.0 82 51.2
CARHR259090 Cardamine hirsuta HOM05D006877 ORTHO05D008735 1.4e-13 83.2 50 76.0
vmacro22172 Vaccinium macrocarpon HOM05D006877 ORTHO05D008735 2.3e-11 75.9 68 51.5
AagrBONN_evm.TU.Sc2ySwM_362.1641 Anthoceros agrestis HOM05D006877 ORTHO05D008735 2.8e-09 68.9 81 42.0
Cpa.g.sc58.9 Carica papaya HOM05D002479 ORTHO05D002675 2.6e-07 62.4 127 26.8
QL08p037589 Quercus lobata HOM05D002479 ORTHO05D002675 3.4e-07 62.0 118 33.1
CDE05G0456 Ceratophyllum demersum HOM05D002479 ORTHO05D002675 9.8e-07 60.5 118 32.2
Oeu043369.1 Olea europaea HOM05D002479 ORTHO05D002675 1.3e-06 60.1 116 34.5
Potri.004G047800 Populus trichocarpa HOM05D000001 ORTHO05D000003 2.2e-06 59.3 344 19.2
Dinv01391 Davidia involucrata HOM05D002479 ORTHO05D002675 2.8e-06 58.9 119 31.9
Ciclev10017547m.g Citrus clementina HOM05D002479 ORTHO05D002675 4.9e-06 58.2 118 33.9
Haze_13105 Corylus avellana HOM05D002479 ORTHO05D002675 4.9e-06 58.2 118 31.4
FAN03G0235 Fragaria x ananassa HOM05D000001 ORTHO05D000003 4.9e-06 58.2 326 22.4
Lsat_1_v5_gn_3_39301 Lactuca sativa HOM05D002479 ORTHO05D002675 4.9e-06 58.2 137 30.7
Lalb_Chr13g0294621 Lupinus albus HOM05D006877 ORTHO05D008735 4.9e-06 58.2 67 43.3
TWI36G0440 Tripterygium wilfordii HOM05D002479 ORTHO05D002675 8.3e-06 57.4 124 30.6
VMungo0251G3229 Vigna mungo HOM05D006877 ORTHO05D008735 8.3e-06 57.4 57 47.4


User provided reference genes

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