Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 2.9e-224 781.6 396 100.0
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 1.6e-174 616.3 408 77.2
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 1.1e-173 613.6 403 77.9
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 1.3e-166 590.1 404 74.5
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 2.5e-151 539.3 419 66.8
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 1.3e-150 537.0 413 67.3
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 1.1e-149 533.9 413 66.6
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 1.2e-148 530.4 421 65.1
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.5e-148 530.0 412 66.5
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 4.9e-147 525.0 398 69.6
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 1.3e-144 516.9 409 63.3
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 2.3e-144 516.2 417 64.3
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 3.0e-144 515.8 391 66.5
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 3.3e-143 512.3 392 67.6
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 8.2e-142 507.7 392 67.6
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.1e-141 507.3 402 64.4
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 6.9e-141 504.6 413 63.4
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 1.2e-140 503.8 413 63.2
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.3e-139 500.4 414 62.1
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 2.9e-139 499.2 413 61.5
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 3.8e-139 498.8 412 62.1
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.1e-138 497.3 388 64.2
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.4e-138 496.9 403 62.5
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 4.2e-138 495.4 410 63.7
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 7.2e-138 494.6 413 62.0
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 7.2e-138 494.6 408 61.3
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 7.2e-138 494.6 410 63.4
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 9.4e-138 494.2 410 63.4
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.1e-137 493.0 408 60.5
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 4.6e-137 491.9 407 63.1
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 3.0e-136 489.2 401 62.6
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 5.1e-136 488.4 398 62.6
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.5e-135 486.9 397 62.7
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 3.3e-135 485.7 415 61.0
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 4.3e-135 485.3 406 61.8
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 2.2e-134 483.0 396 62.4
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 2.2e-134 483.0 415 59.8
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 2.8e-134 482.6 411 61.1
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 4.8e-134 481.9 437 60.6
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 6.3e-134 481.5 403 61.8
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.4e-133 480.3 405 61.2
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 1.8e-133 479.9 404 62.4
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 5.3e-133 478.4 415 59.3
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 6.9e-133 478.0 419 60.4
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 2.0e-132 476.5 408 60.8
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.7e-131 473.4 404 61.4
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 1.7e-131 473.4 395 60.0
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 2.2e-131 473.0 408 59.8
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 1.4e-130 470.3 403 61.0
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.2e-129 467.2 403 60.3
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 2.1e-129 466.5 361 65.1
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 3.6e-129 465.7 390 62.6
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 4.7e-129 465.3 397 61.0
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 4.7e-129 465.3 423 58.4
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 7.9e-129 464.5 393 60.8
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 1.8e-128 463.4 421 60.1
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 2.3e-128 463.0 402 60.7
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 8.8e-128 461.1 365 66.0
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 2.0e-127 459.9 394 61.2
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 9.7e-127 457.6 397 60.7
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 1.3e-126 457.2 381 62.7
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 2.2e-126 456.4 401 59.6
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 4.8e-126 455.3 393 60.8
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 2.4e-125 453.0 405 59.8
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 3.1e-125 452.6 399 59.1
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 5.3e-125 451.8 426 56.6
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 5.9e-124 448.4 402 56.2
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 3.8e-123 445.7 417 57.8
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.9e-122 443.4 348 68.1
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 2.5e-122 443.0 460 54.8
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 7.2e-122 441.4 414 57.2
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.1e-121 438.3 334 65.3
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 5.2e-120 435.3 395 56.7
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 1.5e-119 433.7 404 58.7
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 2.6e-119 433.0 409 57.7
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 3.7e-118 429.1 413 55.7
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 9.1e-117 424.5 350 61.4
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.2e-116 424.1 311 67.5
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 3.5e-116 422.5 353 62.3
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 2.2e-115 419.9 401 56.4
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 6.5e-115 418.3 413 54.7
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.5e-114 417.2 408 54.9
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 3.0e-112 409.5 386 56.0
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 5.2e-112 408.7 428 51.4
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.5e-111 407.1 429 52.4
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 2.6e-111 406.4 394 51.3
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.0e-108 396.7 397 52.9
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 5.2e-104 382.1 438 50.7
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 3.5e-100 369.4 355 51.8
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 3.6e-97 359.4 363 53.7
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.5e-92 342.4 328 56.1
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 4.3e-90 335.9 407 44.5
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 4.3e-90 335.9 328 50.9
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 9.5e-90 334.7 471 41.6
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-89 334.3 335 54.3
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.1e-89 333.6 337 54.0
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.3e-88 330.1 296 59.1
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.4e-87 325.9 296 58.4
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.4e-87 325.9 296 58.4
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.4e-87 325.9 296 58.4
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 5.8e-87 325.5 435 43.0
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 2.1e-81 307.0 210 74.3
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 2.1e-76 290.4 296 52.4
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 4.3e-74 282.7 274 55.1
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 3.7e-70 269.6 209 68.4
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.0e-67 261.5 227 61.2
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.9e-66 257.3 268 53.4
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 8.1e-49 198.7 253 45.8
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 5.0e-30 136.3 99 65.7
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 6.5e-30 136.0 179 38.5
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.1e-29 135.2 130 54.6
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 2.8e-25 120.6 203 38.9
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.6e-20 104.8 71 70.4
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.7e-20 104.0 161 36.6
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-15 88.6 72 69.4
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-15 88.6 72 69.4
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-15 88.6 72 69.4
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 5.3e-08 63.2 47 61.7
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 2.0e-07 61.2 62 64.5
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 3.5e-07 60.5 44 63.6


User provided reference genes

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