Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 3.0e-88 328.6 173 100.0
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 1.7e-83 312.8 178 95.5
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 1.7e-80 302.8 173 91.9
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.6e-78 296.2 173 89.6
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 4.0e-77 291.6 173 85.5
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 5.3e-77 291.2 173 86.7
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 2.6e-76 288.9 173 87.3
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 9.9e-76 287.0 173 84.4
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 1.9e-74 282.7 173 83.2
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.4e-74 282.3 173 82.7
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.4e-74 282.3 173 82.7
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 2.4e-74 282.3 173 82.7
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 3.2e-74 282.0 173 83.2
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 4.6e-73 278.1 175 82.9
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 6.0e-73 277.7 173 85.0
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 6.0e-73 277.7 173 81.5
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 3.0e-72 275.4 176 82.4
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 6.6e-72 274.2 173 79.8
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 8.7e-72 273.9 174 79.9
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 1.1e-71 273.5 174 81.0
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 1.5e-71 273.1 173 80.3
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 1.5e-71 273.1 173 79.8
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 4.3e-71 271.6 173 82.7
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 5.6e-71 271.2 174 81.6
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 7.3e-71 270.8 173 80.3
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.3e-70 270.0 173 82.1
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 1.3e-70 270.0 173 82.1
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 1.6e-70 269.6 173 79.8
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 2.1e-70 269.2 174 81.0
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 1.1e-69 266.9 174 81.6
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 1.1e-69 266.9 174 81.6
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.1e-69 266.9 174 81.6
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.1e-69 266.9 174 81.6
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 1.4e-69 266.5 173 82.7
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 1.8e-69 266.2 175 80.6
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 1.8e-69 266.2 174 79.9
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.4e-69 265.8 174 81.6
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 3.1e-69 265.4 174 80.5
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 4.0e-69 265.0 174 81.0
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 5.3e-69 264.6 173 80.9
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 5.8e-68 261.2 175 80.6
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 5.8e-68 261.2 175 82.3
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 5.8e-68 261.2 174 79.3
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 7.6e-68 260.8 173 80.9
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 1.7e-67 259.6 174 77.6
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 1.7e-67 259.6 175 81.1
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 2.2e-67 259.2 174 79.3
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 4.9e-67 258.1 166 81.3
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 6.4e-67 257.7 175 78.9
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 1.1e-66 256.9 174 77.6
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 1.9e-66 256.1 175 79.4
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 1.9e-66 256.1 173 75.7
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 4.2e-66 255.0 173 76.3
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.6e-65 253.1 167 80.8
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.1e-65 252.7 174 77.6
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 2.1e-65 252.7 174 75.9
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 1.0e-64 250.4 175 77.1
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 1.0e-64 250.4 175 77.1
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 1.0e-64 250.4 173 78.0
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 1.8e-64 249.6 176 77.3
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 1.1e-63 246.9 174 77.0
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 3.3e-63 245.4 174 77.6
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 5.6e-63 244.6 174 75.9
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 2.1e-62 242.7 184 73.4
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 8.1e-62 240.7 165 78.8
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 2.0e-60 236.1 177 72.9
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 2.6e-60 235.7 175 74.3
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 1.7e-59 233.0 153 80.4
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 2.9e-59 232.3 175 73.1
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 3.8e-59 231.9 175 73.1
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 3.8e-59 231.9 175 73.1
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 3.8e-59 231.9 175 73.1
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 6.5e-59 231.1 175 72.6
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 6.5e-59 231.1 175 72.0
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 8.4e-59 230.7 176 71.0
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 8.4e-59 230.7 175 72.6
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.1e-58 230.3 175 72.6
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 1.4e-58 229.9 175 72.6
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 2.5e-58 229.2 175 72.0
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 2.5e-58 229.2 167 74.3
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 4.2e-58 228.4 175 72.6
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 7.1e-58 227.6 175 71.4
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 7.1e-58 227.6 175 71.4
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 9.3e-58 227.3 175 71.4
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 2.3e-56 222.6 138 79.0
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 4.8e-54 214.9 174 67.2
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 8.2e-54 214.2 169 71.0
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.1e-53 213.8 151 79.5
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 1.4e-53 213.4 140 75.7
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 5.3e-53 211.5 153 76.5
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 9.0e-53 210.7 173 65.3
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 1.7e-51 206.5 173 64.7
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 1.1e-50 203.8 151 73.5
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 1.9e-50 203.0 178 61.2
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 4.6e-49 198.4 153 69.9
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 6.1e-49 198.0 175 60.6
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 8.2e-46 187.6 173 61.8
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 5.3e-45 184.9 138 79.0
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 1.9e-42 176.4 165 63.0
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 9.4e-42 174.1 137 70.8
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.6e-41 173.3 137 70.8
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 4.6e-41 171.8 144 72.2
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 2.3e-40 169.5 180 52.8
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 1.5e-39 166.8 117 77.8
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 3.1e-37 159.1 114 77.2
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 4.7e-33 145.2 155 58.7
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 7.9e-33 144.4 108 75.9
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 7.9e-33 144.4 106 76.4
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 9.7e-31 137.5 112 72.3
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 7.2e-26 121.3 173 42.2
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 1.7e-22 110.2 106 64.2
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 2.2e-22 109.8 165 43.6
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 2.2e-22 109.8 105 66.7
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 3.1e-21 105.9 69 84.1
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 2.5e-18 96.3 88 64.8
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 1.8e-16 90.1 83 63.9
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 2.8e-14 82.8 107 53.3
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 3.7e-14 82.4 80 58.8
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 1.8e-13 80.1 122 50.0
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 7.0e-13 78.2 87 57.5
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 1.2e-12 77.4 77 55.8
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 2.0e-12 76.6 59 71.2
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 5.9e-12 75.1 59 69.5
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 1.0e-11 74.3 59 69.5
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 1.3e-11 73.9 66 65.2
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 2.2e-11 73.2 59 67.8
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 2.9e-11 72.8 95 50.5
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 5.0e-11 72.0 60 70.0
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 1.9e-10 70.1 94 50.0
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 3.2e-10 69.3 59 67.8
Sabra04G0079400 Salix brachista HOM05D005631 ORTHO05D006765 1.6e-09 67.0 80 52.5
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 1.6e-09 67.0 71 57.7
Sabra15G0067400 Salix brachista HOM05D003748 ORTHO05D004108 1.8e-08 63.5 81 51.9
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 6.8e-08 61.6 43 79.1
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 2.6e-07 59.7 43 76.7
CBR_g4734 Chara braunii HOM05D005631 ORTHO05D006765 5.7e-07 58.5 101 44.6
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 9.8e-07 57.8 43 74.4
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 1.7e-06 57.0 138 33.3
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 3.7e-06 55.8 40 80.0


User provided reference genes

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