Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold184G39990 Striga asiatica HOM05D001874 ORTHO05D405292 8.6e-46 186.8 107 100.0
SGA_v2.0_scaffold157G37430 Striga asiatica HOM05D001874 ORTHO05D402262 6.9e-11 70.9 55 65.5
SGA_v2.0_scaffold44G16850 Striga asiatica HOM05D001874 ORTHO05D002166 1.0e-09 67.0 89 44.9
Migut.F00147 Erythranthe guttata HOM05D001874 ORTHO05D002166 8.4e-09 63.9 89 42.7
Hund09718 Selenicereus undatus HOM05D001874 ORTHO05D002166 1.9e-08 62.8 94 39.4
FAN10G3764 Fragaria x ananassa HOM05D001874 ORTHO05D002166 2.5e-08 62.4 101 37.6
RcHm_v2.0_Chr1g0382931 Rosa chinensis HOM05D001874 ORTHO05D002166 7.1e-08 60.8 95 38.9
THA.LOC104798988 Tarenaya hassleriana HOM05D001874 ORTHO05D002166 7.1e-08 60.8 100 37.0
unitig_0.g2442 Utricularia gibba HOM05D001874 ORTHO05D002166 7.1e-08 60.8 89 39.3
MSTRG.8607 Avicennia marina HOM05D001874 ORTHO05D002166 9.3e-08 60.5 95 40.0
MSTRG.26973 Avicennia marina HOM05D001874 ORTHO05D002166 1.2e-07 60.1 93 39.8
FvH4_7g32970 Fragaria vesca HOM05D001874 ORTHO05D002166 1.2e-07 60.1 95 38.9
FAN01G0715 Fragaria x ananassa HOM05D001874 ORTHO05D002166 1.2e-07 60.1 95 38.9
FAN03G2906 Fragaria x ananassa HOM05D001874 ORTHO05D002166 1.2e-07 60.1 95 38.9
FAN10G2792 Fragaria x ananassa HOM05D001874 ORTHO05D002166 1.2e-07 60.1 95 38.9
AL6G36110 Arabidopsis lyrata HOM05D001874 ORTHO05D002166 1.6e-07 59.7 100 36.0
AT5G24520 Arabidopsis thaliana HOM05D001874 ORTHO05D002166 1.6e-07 59.7 100 36.0
Carub.0006s2233 Capsella rubella HOM05D001874 ORTHO05D002166 1.6e-07 59.7 100 36.0
CARHR188910 Cardamine hirsuta HOM05D001874 ORTHO05D002166 1.6e-07 59.7 100 36.0
Dinv17297 Davidia involucrata HOM05D001874 ORTHO05D002166 1.6e-07 59.7 95 37.9
Hma1.2p1_0415F.1_g148210 Hydrangea macrophylla HOM05D001874 ORTHO05D002166 1.6e-07 59.7 95 37.9
Prupe.2G319500 Prunus persica HOM05D001874 ORTHO05D002166 1.6e-07 59.7 95 37.9
Sp2g22830 Schrenkiella parvula HOM05D001874 ORTHO05D002166 1.6e-07 59.7 100 36.0
PSO782G1536 Papaver somniferum HOM05D001874 ORTHO05D002166 2.1e-07 59.3 95 36.8
TAR374G1109 Trochodendron aralioides HOM05D001874 ORTHO05D002166 2.1e-07 59.3 92 39.1
Aa31LG4G17990 Aethionema arabicum HOM05D001874 ORTHO05D002166 2.7e-07 58.9 100 36.0
COL.COLO4_14375 Corchorus olitorius HOM05D001874 ORTHO05D002166 2.7e-07 58.9 95 36.8
Gohir.1Z049560 Gossypium hirsutum HOM05D001874 ORTHO05D002166 2.7e-07 58.9 95 37.9
Gohir.D04G000300 Gossypium hirsutum HOM05D001874 ORTHO05D002166 2.7e-07 58.9 95 37.9
Gorai.012G001200 Gossypium raimondii HOM05D001874 ORTHO05D002166 2.7e-07 58.9 95 37.9
Cpa.g.sc3.159 Carica papaya HOM05D001874 ORTHO05D002166 3.5e-07 58.5 95 36.8
Ca_16797_v3 Cicer arietinum L. HOM05D001874 ORTHO05D002166 3.5e-07 58.5 100 36.0
Duzib068G0377 Durio zibethinus HOM05D001874 ORTHO05D002166 3.5e-07 58.5 95 36.8
MD01G1228700 Malus domestica HOM05D001874 ORTHO05D002166 3.5e-07 58.5 95 36.8
MD07G1299800 Malus domestica HOM05D001874 ORTHO05D002166 3.5e-07 58.5 95 36.8
Medtr3g092840 Medicago truncatula HOM05D001874 ORTHO05D002166 3.5e-07 58.5 100 36.0
Psat5g071720 Pisum sativum HOM05D001874 ORTHO05D002166 3.5e-07 58.5 100 36.0
Thecc.03G209300 Theobroma cacao HOM05D001874 ORTHO05D002166 3.5e-07 58.5 95 36.8
TAR629G2325 Trochodendron aralioides HOM05D001874 ORTHO05D002166 3.5e-07 58.5 92 38.0
CANSAT21G1359 Cannabis sativa HOM05D001874 ORTHO05D002166 4.6e-07 58.2 95 36.8
CiPaw.06G040900 Carya illinoinensis HOM05D001874 ORTHO05D002166 4.6e-07 58.2 95 37.9
Eucgr.A01400 Eucalyptus grandis HOM05D001874 ORTHO05D002166 4.6e-07 58.2 93 37.6
PGR042G0141 Punica granatum HOM05D001874 ORTHO05D002166 4.6e-07 58.2 95 35.8
QL09p007015 Quercus lobata HOM05D001874 ORTHO05D002166 4.6e-07 58.2 95 37.9
CSS0004406 Camellia sinensis var. sinensis HOM05D001874 ORTHO05D002166 6.0e-07 57.8 95 36.8
Haze_00312 Corylus avellana HOM05D001874 ORTHO05D002166 6.0e-07 57.8 95 36.8
Thhalv10004515m.g Eutrema salsugineum HOM05D001874 ORTHO05D002166 6.0e-07 57.8 100 35.0
Lj1g0024135 Lotus japonicus HOM05D001874 ORTHO05D002166 6.0e-07 57.8 95 35.8
Peaxi162Scf00912g00146 Petunia axillaris HOM05D001874 ORTHO05D002166 6.0e-07 57.8 96 36.5
TWI23G0637 Tripterygium wilfordii HOM05D001874 ORTHO05D002166 6.0e-07 57.8 95 36.8
Atru.chr12.2441 Acer truncatum HOM05D001874 ORTHO05D002166 7.9e-07 57.4 95 36.8
Duzib084G0332 Durio zibethinus HOM05D001874 ORTHO05D002166 7.9e-07 57.4 95 35.8
PSO063G2595 Papaver somniferum HOM05D001874 ORTHO05D002166 7.9e-07 57.4 95 35.8
vmacro10162 Vaccinium macrocarpon HOM05D001874 ORTHO05D002166 7.9e-07 57.4 95 36.8
BcaNung01239 Brassica carinata HOM05D001874 ORTHO05D002166 1.0e-06 57.0 100 35.0
C07p43200 Brassica napus HOM05D001874 ORTHO05D002166 1.0e-06 57.0 100 35.0
Dinv29208 Davidia involucrata HOM05D001874 ORTHO05D002166 1.0e-06 57.0 95 36.8
Lsat_1_v5_gn_1_129320 Lactuca sativa HOM05D001874 ORTHO05D002166 1.0e-06 57.0 92 38.0
Rhsim09G0209900 Rhododendron simsii HOM05D001874 ORTHO05D002166 1.0e-06 57.0 95 36.8
Sc19g0000550 Simmondsia chinensis HOM05D001874 ORTHO05D002166 1.0e-06 57.0 100 35.0
Lj1P1028T38 Lonicera japonica HOM05D001874 ORTHO05D002166 1.8e-06 56.2 95 35.8
Nitab4.5_0000319g0010 Nicotiana tabacum HOM05D001874 ORTHO05D002166 1.8e-06 56.2 89 38.2
Nitab4.5_0015003g0010 Nicotiana tabacum HOM05D001874 ORTHO05D002166 1.8e-06 56.2 89 38.2
SalBow6G2567 Salvia bowleyana HOM05D001874 ORTHO05D002166 1.8e-06 56.2 89 39.3
PGSC0003DMG400000561 Solanum tuberosum HOM05D001874 ORTHO05D002166 1.8e-06 56.2 89 38.2
Actinidia08700 Actinidia chinensis HOM05D001874 ORTHO05D002166 2.3e-06 55.8 95 35.8
BcaNung02017 Brassica carinata HOM05D001874 ORTHO05D002166 2.3e-06 55.8 100 34.0
BcaNung02018 Brassica carinata HOM05D001874 ORTHO05D002166 2.3e-06 55.8 100 34.0
BcaNung07023 Brassica carinata HOM05D001874 ORTHO05D002166 2.3e-06 55.8 100 34.0
A06p35320 Brassica napus HOM05D001874 ORTHO05D002166 2.3e-06 55.8 100 34.0
BolC7t44845H Brassica oleracea HOM05D001874 ORTHO05D002166 2.3e-06 55.8 100 34.0
BraA06t26458Z Brassica rapa HOM05D001874 ORTHO05D002166 2.3e-06 55.8 100 34.0
ECA248G2430 Erigeron canadensis HOM05D001874 ORTHO05D002166 2.3e-06 55.8 92 38.0
Gohir.A08G104600 Gossypium hirsutum HOM05D001874 ORTHO05D002166 2.3e-06 55.8 89 37.1
Sopen03g028100 Solanum pennellii HOM05D001874 ORTHO05D002166 2.3e-06 55.8 89 38.2
PGSC0003DMG400026477 Solanum tuberosum HOM05D001874 ORTHO05D002166 2.3e-06 55.8 89 38.2
Ah.07g204410 Amaranthus hybridus HOM05D001874 ORTHO05D002166 3.0e-06 55.5 100 32.0
MELO3C018988.2 Cucumis melo HOM05D001874 ORTHO05D002166 3.9e-06 55.1 95 34.7
Gohir.D08G116300 Gossypium hirsutum HOM05D001874 ORTHO05D002166 3.9e-06 55.1 89 39.3
Cc02_g00780 Coffea canephora HOM05D001874 ORTHO05D002166 5.1e-06 54.7 94 35.1
Solyc03g097340.1 Solanum lycopersicum HOM05D001874 ORTHO05D002166 5.1e-06 54.7 89 37.1
CsaV3_4G008980 Cucumis sativus L. HOM05D001874 ORTHO05D002166 6.7e-06 54.3 95 34.7
Medtr3g092830 Medicago truncatula HOM05D001874 ORTHO05D002166 6.7e-06 54.3 98 35.7
Phvul.009G044700 Phaseolus vulgaris HOM05D001874 ORTHO05D002166 6.7e-06 54.3 95 34.7
Mapoly0161s0021 Marchantia polymorpha HOM05D001874 ORTHO05D002166 8.7e-06 53.9 58 46.6
PGSC0003DMG400044039 Solanum tuberosum HOM05D001874 ORTHO05D002166 8.7e-06 53.9 89 37.1
VMungo1309G0260 Vigna mungo HOM05D001874 ORTHO05D002166 8.7e-06 53.9 95 34.7


User provided reference genes

Program Settings