Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 0.0e+00 2026.1 1014 100.0
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 0.0e+00 1112.1 1022 58.4
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 2.7e-266 922.5 1059 48.3
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 8.8e-257 891.0 834 57.8
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 5.9e-253 878.2 1056 47.6
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 1.0e-249 867.5 1063 47.1
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 1.8e-246 856.7 1057 46.1
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 1.0e-244 850.9 1088 45.0
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 2.5e-243 846.3 1054 46.6
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 6.1e-242 841.6 964 48.4
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 6.8e-241 838.2 1052 46.0
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 2.6e-240 836.3 1042 46.4
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 7.5e-240 834.7 1082 45.5
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 5.4e-238 828.6 1041 46.0
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 1.2e-237 827.4 1053 45.6
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 1.5e-235 820.5 1066 43.2
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 1.6e-234 817.0 1063 44.5
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 6.1e-234 815.1 1059 44.6
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 1.4e-233 813.9 1059 43.5
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 3.0e-233 812.8 1034 44.4
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 1.3e-231 807.4 1062 43.5
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 1.3e-231 807.4 1052 43.7
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 3.8e-228 795.8 1053 42.7
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.6e-226 790.4 1124 41.0
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 4.0e-225 785.8 1077 41.6
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 6.8e-225 785.0 1052 43.0
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 8.9e-225 784.6 1083 41.6
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 1.3e-223 780.8 1048 42.7
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 3.2e-222 776.2 1043 43.1
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.2e-221 774.2 1005 44.9
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 4.7e-218 762.3 1054 42.4
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 1.0e-212 744.6 1032 41.1
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 2.8e-210 736.5 1065 42.5
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 8.1e-210 734.9 892 46.6
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 6.8e-209 731.9 1037 42.0
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 1.5e-208 730.7 1004 43.0
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 9.9e-208 728.0 981 41.9
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 6.4e-207 725.3 869 46.7
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 1.4e-206 724.2 1034 41.3
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 1.0e-204 718.0 1051 40.5
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 1.0e-204 718.0 1066 41.3
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 1.7e-204 717.2 1027 40.7
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 3.0e-204 716.5 1038 40.7
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 4.3e-203 712.6 948 42.8
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 4.7e-202 709.1 965 42.4
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 1.4e-201 707.6 949 42.0
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 2.9e-199 699.9 933 41.8
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 1.4e-198 697.6 1075 39.0
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 2.3e-196 690.3 906 43.3
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 3.0e-196 689.9 1029 39.7
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 8.4e-191 671.8 802 46.9
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 1.6e-189 667.5 813 45.4
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 6.6e-188 662.1 929 40.4
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 6.9e-185 652.1 998 40.8
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 1.8e-180 637.5 1046 39.1
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 7.1e-174 615.5 791 46.0
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 2.5e-171 607.1 1025 37.1
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 2.8e-170 603.6 825 41.9
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 7.6e-168 595.5 802 43.5
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 2.8e-162 577.0 854 41.2
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 2.8e-162 577.0 695 47.5
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 4.8e-162 576.2 867 41.6
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 4.8e-162 576.2 713 46.1
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 4.3e-155 553.1 967 36.1
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 2.4e-153 547.4 968 35.6
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 1.2e-152 545.0 641 47.7
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 2.9e-151 540.4 890 37.1
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 1.2e-144 518.5 1047 34.2
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 5.9e-144 516.2 876 36.4
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 4.1e-137 493.4 700 40.7
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 5.3e-129 466.5 524 48.7
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 1.2e-117 428.7 584 44.0
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 9.2e-113 412.5 816 34.9
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 3.6e-109 400.6 529 43.1
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 6.8e-108 396.4 515 43.5
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 5.6e-102 376.7 380 50.8
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 2.1e-101 374.8 456 45.8
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 3.7e-98 364.0 463 44.1
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 6.0e-88 330.1 322 51.2
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 2.8e-85 321.2 644 33.5
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 1.4e-84 318.9 838 30.4
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 1.7e-82 312.0 543 38.7
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 1.8e-76 292.0 976 26.9
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.1e-73 282.7 541 35.5
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 2.1e-72 278.5 454 36.6
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 3.2e-65 254.6 241 53.9
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 3.9e-63 247.7 978 24.9
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 1.5e-59 235.7 936 25.5
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 3.9e-55 221.1 668 27.7
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 4.2e-49 201.1 211 47.9
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 9.3e-49 199.9 332 40.4
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 8.7e-47 193.4 212 49.1
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 9.7e-46 189.9 195 49.7
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 2.2e-45 188.7 279 37.6
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 4.1e-44 184.5 237 46.0
RcHm_v2.0_Chr3g0472501 Rosa chinensis HOM05D006439 ORTHO05D008152 3.4e-43 181.4 224 42.4
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 2.5e-41 175.3 252 39.7
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 1.1e-36 159.8 131 55.0
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.1e-36 157.9 123 58.5
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 5.7e-30 137.5 189 43.4
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 7.4e-30 137.1 170 47.6
FAN09G3024 Fragaria x ananassa HOM05D006439 ORTHO05D008152 8.2e-29 133.7 158 44.3
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 2.4e-28 132.1 159 42.8
AUR62028586 Chenopodium quinoa HOM05D006439 ORTHO05D008152 2.6e-27 128.6 95 64.2
Lj3A1001T31 Lonicera japonica HOM05D006439 ORTHO05D008152 1.7e-26 125.9 97 60.8
AL4G34520 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 6.7e-23 114.0 188 35.6
Aqoxy2G01351 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 3.7e-21 108.2 163 36.2
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.0e-18 100.1 294 30.3
SEGI_02684 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.5e-17 96.3 102 46.1
TAR623G0848 Trochodendron aralioides HOM05D006439 ORTHO05D008152 7.2e-17 94.0 117 36.8
AUR62033535 Chenopodium quinoa HOM05D006439 ORTHO05D008152 1.6e-16 92.8 77 57.1
AL4G34560 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 4.5e-11 74.7 104 40.4
Thecc.10G111400 Theobroma cacao HOM05D006439 ORTHO05D008152 1.7e-10 72.8 145 31.0
Hund05378 Selenicereus undatus HOM05D000530 ORTHO05D000621 1.6e-08 66.2 427 23.0
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 3.6e-08 65.1 64 48.4
CSS0035414 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 8.0e-08 63.9 53 56.6
CSS0045256 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 2.6e-06 58.9 53 58.5
Ca_04901_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 2.6e-06 58.9 199 26.6
Haze_15355 Corylus avellana HOM05D001905 ORTHO05D001820 4.4e-06 58.2 332 23.8
Psat6g076200 Pisum sativum HOM05D006439 ORTHO05D008152 5.7e-06 57.8 42 54.8
HanXRQChr10g0283811 Helianthus annuus HOM05D000530 ORTHO05D000621 9.8e-06 57.0 264 28.4


User provided reference genes

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