Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold183G39866 Striga asiatica HOM05D000096 ORTHO05D000045 1.4e-84 316.2 157 100.0
PGSC0003DMG400005510 Solanum tuberosum HOM05D000096 ORTHO05D000045 2.0e-14 83.2 116 38.8
PGSC0003DMG400033371 Solanum tuberosum HOM05D000096 ORTHO05D000045 2.2e-13 79.7 116 37.1
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 3.7e-13 79.0 132 35.6
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 4.9e-13 78.6 130 34.6
TPR.G38580 Trifolium pratense HOM05D000096 ORTHO05D000045 6.3e-13 78.2 102 46.1
TPR.G325 Trifolium pratense HOM05D000096 ORTHO05D000045 8.3e-13 77.8 114 35.1
TPR.G9555 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-12 77.0 132 34.8
Lj4g0008839 Lotus japonicus HOM05D000096 ORTHO05D000045 3.1e-12 75.9 99 39.4
Medtr7g050355 Medicago truncatula HOM05D000096 ORTHO05D000045 4.1e-12 75.5 114 37.7
Medtr1g044190 Medicago truncatula HOM05D000096 ORTHO05D000045 5.4e-12 75.1 99 41.4
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 7.0e-12 74.7 132 34.1
TPR.G17757 Trifolium pratense HOM05D000096 ORTHO05D000045 9.2e-12 74.3 102 44.1
Medtr2g055890 Medicago truncatula HOM05D000096 ORTHO05D000045 1.2e-11 73.9 99 38.4
TPR.G27355 Trifolium pratense HOM05D000096 ORTHO05D000045 1.6e-11 73.6 113 38.9
Medtr0296s0010 Medicago truncatula HOM05D000096 ORTHO05D000045 2.0e-11 73.2 101 40.6
Lj3g0000363 Lotus japonicus HOM05D000096 ORTHO05D000045 4.5e-11 72.0 116 34.5
Lalb_Chr03g0030761 Lupinus albus HOM05D000096 ORTHO05D000045 5.9e-11 71.6 87 41.4
Lj5g0016408 Lotus japonicus HOM05D000096 ORTHO05D000045 7.8e-11 71.2 149 30.9
Medtr0032s0020 Medicago truncatula HOM05D000096 ORTHO05D000045 7.8e-11 71.2 122 36.1
Nitab4.5_0006311g0040 Nicotiana tabacum HOM05D000096 ORTHO05D000045 7.8e-11 71.2 102 42.2
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 7.8e-11 71.2 134 38.8
Lj4g0020000 Lotus japonicus HOM05D000096 ORTHO05D000045 1.0e-10 70.9 90 40.0
TPR.G14820 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-10 70.5 116 35.3
TPR.G20281 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-10 70.5 86 45.3
QL11p040805 Quercus lobata HOM05D000096 ORTHO05D000045 1.7e-10 70.1 134 38.1
ECA247G2253 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.3e-10 69.7 113 31.9
TPR.G21913 Trifolium pratense HOM05D000096 ORTHO05D000045 2.3e-10 69.7 99 38.4
TPR.G38352 Trifolium pratense HOM05D000096 ORTHO05D000045 2.9e-10 69.3 96 40.6
CAN.G213.26 Capsicum annuum HOM05D000096 ORTHO05D000001 3.8e-10 68.9 106 34.9
TPR.G1822 Trifolium pratense HOM05D000096 ORTHO05D000045 3.8e-10 68.9 110 38.2
TPR.G7855 Trifolium pratense HOM05D000096 ORTHO05D000045 3.8e-10 68.9 137 31.4
TPR.G8666 Trifolium pratense HOM05D000096 ORTHO05D000045 3.8e-10 68.9 114 38.6
TPR.G8851 Trifolium pratense HOM05D000096 ORTHO05D000045 3.8e-10 68.9 101 42.6
ECA232G2412 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.0e-10 68.6 96 33.3
ECA233G3334 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.0e-10 68.6 98 31.6
TPR.G14299 Trifolium pratense HOM05D000096 ORTHO05D000045 5.0e-10 68.6 108 36.1
TWI09G0899 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 5.0e-10 68.6 122 32.0
Lj1g0025291 Lotus japonicus HOM05D000096 ORTHO05D000045 6.6e-10 68.2 101 33.7
TPR.G20668 Trifolium pratense HOM05D000096 ORTHO05D000045 6.6e-10 68.2 139 28.8
HanXRQChr03g0061461 Helianthus annuus HOM05D000096 ORTHO05D000045 8.6e-10 67.8 81 42.0
TPR.G22667 Trifolium pratense HOM05D000096 ORTHO05D000045 1.1e-09 67.4 96 37.5
ECA248G0218 Erigeron canadensis HOM05D003957 ORTHO05D004833 1.5e-09 67.0 86 38.4
ECA233G3690 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.5e-09 66.2 87 36.8
TPR.G16827 Trifolium pratense HOM05D000096 ORTHO05D000045 2.5e-09 66.2 152 31.6
ECA246G2079 Erigeron canadensis HOM05D000006 ORTHO05D000045 3.3e-09 65.9 101 33.7
ECA233G1381 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.3e-09 65.5 122 35.2
ECA236G2932 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.3e-09 65.5 93 37.6
TPR.G25805 Trifolium pratense HOM05D000096 ORTHO05D000045 4.3e-09 65.5 152 30.9
TPR.G33050 Trifolium pratense HOM05D000096 ORTHO05D000045 4.3e-09 65.5 104 36.5
ECA236G1535 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.3e-09 64.7 104 30.8
ECA240G1019 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.3e-09 64.7 107 31.8
Medtr3g100990 Medicago truncatula HOM05D000096 ORTHO05D000045 7.3e-09 64.7 120 34.2
TPR.G17918 Trifolium pratense HOM05D000096 ORTHO05D000045 7.3e-09 64.7 112 34.8
TPR.G8108 Trifolium pratense HOM05D000096 ORTHO05D000045 7.3e-09 64.7 87 39.1
ECA233G3752 Erigeron canadensis HOM05D000096 ORTHO05D000045 9.5e-09 64.3 108 34.3
ECA234G0183 Erigeron canadensis HOM05D000096 ORTHO05D000045 9.5e-09 64.3 115 32.2
ECA240G2292 Erigeron canadensis HOM05D000096 ORTHO05D000045 9.5e-09 64.3 94 34.0
Medtr4g037500 Medicago truncatula HOM05D000096 ORTHO05D000045 9.5e-09 64.3 93 38.7
TPR.G29574 Trifolium pratense HOM05D000096 ORTHO05D000045 9.5e-09 64.3 152 30.3
ECA233G0025 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-08 63.9 86 39.5
TPR.G15077 Trifolium pratense HOM05D000096 ORTHO05D000045 1.6e-08 63.5 112 33.9
TPR.G27026 Trifolium pratense HOM05D000096 ORTHO05D000045 1.6e-08 63.5 87 36.8
TPR.G33044 Trifolium pratense HOM05D000096 ORTHO05D000045 1.6e-08 63.5 96 35.4
ECA238G1785 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.1e-08 63.2 108 33.3
Medtr2g064230 Medicago truncatula HOM05D000096 ORTHO05D000045 2.1e-08 63.2 111 30.6
Medtr2g066670 Medicago truncatula HOM05D000096 ORTHO05D000045 2.1e-08 63.2 111 30.6
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 2.1e-08 63.2 118 35.6
TPR.G38454 Trifolium pratense HOM05D004863 ORTHO05D005802 2.1e-08 63.2 105 32.4
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 2.1e-08 63.2 116 33.6
ECA240G3405 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.8e-08 62.8 98 32.7
ECA248G1544 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.8e-08 62.8 104 33.7
QL09p000096 Quercus lobata HOM05D000096 ORTHO05D000045 2.8e-08 62.8 113 34.5
TPR.G34078 Trifolium pratense HOM05D000096 ORTHO05D000045 2.8e-08 62.8 124 33.1
ECA238G0181 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-08 62.4 104 33.7
ECA238G3823 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-08 62.4 108 32.4
Glyma.12G111300 Glycine max HOM05D000096 ORTHO05D000045 3.6e-08 62.4 87 36.8
ECA238G3552 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.7e-08 62.0 92 35.9
TPR.G15816 Trifolium pratense HOM05D000096 ORTHO05D000045 4.7e-08 62.0 116 31.9
ECA236G4162 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.1e-08 61.6 94 35.1
ECA246G0109 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.1e-08 61.6 87 35.6
TPR.G14904 Trifolium pratense HOM05D000096 ORTHO05D000045 6.1e-08 61.6 135 28.9
TPR.G15489 Trifolium pratense HOM05D000096 ORTHO05D000045 6.1e-08 61.6 142 30.3
ECA240G2989 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.0e-08 61.2 94 35.1
Medtr1g055385 Medicago truncatula HOM05D000096 ORTHO05D000045 8.0e-08 61.2 96 37.5
Medtr7g039200 Medicago truncatula HOM05D000096 ORTHO05D000045 8.0e-08 61.2 89 36.0
ECA233G1394 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.0e-07 60.8 94 35.1
ECA246G2314 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.0e-07 60.8 127 31.5
ECA247G1956 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.0e-07 60.8 101 31.7
Lj6g0026524 Lotus japonicus HOM05D000096 ORTHO05D000045 1.0e-07 60.8 99 36.4
TPR.G13264 Trifolium pratense HOM05D000096 ORTHO05D000045 1.0e-07 60.8 86 38.4
ECA234G1666 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.4e-07 60.5 109 32.1
ECA238G2772 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.4e-07 60.5 109 32.1
Glyma.15G193800 Glycine max HOM05D000096 ORTHO05D000045 1.4e-07 60.5 86 36.0
TPR.G29271 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-07 60.5 90 35.6
TPR.G7462 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-07 60.5 82 41.5
TWI31G0491 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 1.4e-07 60.5 141 31.2
ECA236G3529 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.8e-07 60.1 79 34.2
Medtr2g049690 Medicago truncatula HOM05D000096 ORTHO05D000045 1.8e-07 60.1 125 36.0
TPR.G1802 Trifolium pratense HOM05D000096 ORTHO05D000045 1.8e-07 60.1 96 32.3
AUR62017545 Chenopodium quinoa HOM05D000096 ORTHO05D000045 3.0e-07 59.3 95 30.5
ECA246G2676 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.0e-07 59.3 92 35.9
TPR.G38805 Trifolium pratense HOM05D000096 ORTHO05D000045 3.0e-07 59.3 135 31.1
TPR.G5776 Trifolium pratense HOM05D000096 ORTHO05D000045 3.0e-07 59.3 90 33.3
ECA232G3959 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.0e-07 58.9 84 34.5
TPR.G34939 Trifolium pratense HOM05D000096 ORTHO05D000045 4.0e-07 58.9 101 37.6
Duzib177G0030 Durio zibethinus HOM05D000096 ORTHO05D000045 5.2e-07 58.5 92 37.0
ECA236G0125 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.2e-07 58.5 108 32.4
ECA236G5075 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.2e-07 58.5 108 32.4
ECA233G0405 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.8e-07 58.2 79 38.0
ECA238G1832 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.8e-07 58.2 105 30.5
Medtr3g055445 Medicago truncatula HOM05D000096 ORTHO05D000045 6.8e-07 58.2 96 35.4
Medtr5g032840 Medicago truncatula HOM05D000096 ORTHO05D000045 6.8e-07 58.2 96 34.4
Glyma.04G116000 Glycine max HOM05D000096 ORTHO05D000045 8.9e-07 57.8 86 32.6
TPR.G18084 Trifolium pratense HOM05D000096 ORTHO05D000045 8.9e-07 57.8 132 31.8
TPR.G18343 Trifolium pratense HOM05D000096 ORTHO05D000045 8.9e-07 57.8 152 30.3
ECA232G0939 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-06 57.4 108 30.6
ECA236G4996 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-06 57.4 84 35.7
ECA248G1927 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-06 57.0 82 35.4
Glyma.16G109000 Glycine max HOM05D000096 ORTHO05D000045 1.5e-06 57.0 81 34.6
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.5e-06 57.0 87 36.8
Medtr1g012040 Medicago truncatula HOM05D000096 ORTHO05D000045 1.5e-06 57.0 115 27.0
TPR.G26472 Trifolium pratense HOM05D000096 ORTHO05D000045 1.5e-06 57.0 152 29.6
TWI77G0609 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 1.5e-06 57.0 84 34.5
ECA248G3651 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-06 56.6 83 37.3
Medtr0003s0390 Medicago truncatula HOM05D000096 ORTHO05D000045 2.0e-06 56.6 111 30.6
Medtr5g061500 Medicago truncatula HOM05D000096 ORTHO05D000045 2.0e-06 56.6 121 27.3
TPR.G27218 Trifolium pratense HOM05D000096 ORTHO05D000045 2.0e-06 56.6 103 31.1
TPR.G31899 Trifolium pratense HOM05D000096 ORTHO05D000045 2.0e-06 56.6 85 38.8
ECA133G0008 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-06 56.2 107 29.9
ECA232G2437 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-06 56.2 80 38.8
ECA233G2825 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-06 56.2 79 38.0
ECA238G0298 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-06 56.2 80 38.8
ECA238G0383 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-06 56.2 105 29.5
ECA240G0922 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.6e-06 56.2 84 33.3
Glyma.09G080200 Glycine max HOM05D000096 ORTHO05D000045 2.6e-06 56.2 83 33.7
TPR.G14138 Trifolium pratense HOM05D000096 ORTHO05D000045 2.6e-06 56.2 152 27.6
Glyma.07G160600 Glycine max HOM05D000096 ORTHO05D000045 3.4e-06 55.8 81 34.6
Medtr2g068990 Medicago truncatula HOM05D000096 ORTHO05D000045 3.4e-06 55.8 89 30.3
Medtr2g089470 Medicago truncatula HOM05D000096 ORTHO05D000045 3.4e-06 55.8 89 30.3
Medtr7g034270 Medicago truncatula HOM05D000096 ORTHO05D000045 3.4e-06 55.8 89 30.3
LjContig00141g0020716 Lotus japonicus HOM05D000096 ORTHO05D000045 4.4e-06 55.5 99 27.3
Medtr6g029550 Medicago truncatula HOM05D000096 ORTHO05D000045 4.4e-06 55.5 108 29.6
CAN.G732.34 Capsicum annuum HOM05D001816 ORTHO05D002001 5.8e-06 55.1 99 37.4
Glyma.18G152100 Glycine max HOM05D000096 ORTHO05D000045 5.8e-06 55.1 89 38.2
Medtr4g120080 Medicago truncatula HOM05D000096 ORTHO05D000045 5.8e-06 55.1 98 27.6
Medtr5g032940 Medicago truncatula HOM05D000096 ORTHO05D000045 5.8e-06 55.1 104 28.8
Medtr6g008045 Medicago truncatula HOM05D000096 ORTHO05D000045 5.8e-06 55.1 116 27.6
Glyma.09G061100 Glycine max HOM05D000096 ORTHO05D000045 7.5e-06 54.7 96 28.1
Hma1.2p1_0099F.1_g048480 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 7.5e-06 54.7 99 35.4
Medtr1g021210 Medicago truncatula HOM05D000096 ORTHO05D000045 7.5e-06 54.7 99 30.3
Medtr8g022960 Medicago truncatula HOM05D000096 ORTHO05D000045 7.5e-06 54.7 94 28.7
ECA236G4768 Erigeron canadensis HOM05D000096 ORTHO05D000045 9.8e-06 54.3 83 36.1
Glyma.10G108261 Glycine max HOM05D000096 ORTHO05D000045 9.8e-06 54.3 99 28.3
Lj5g0019970 Lotus japonicus HOM05D000096 ORTHO05D000045 9.8e-06 54.3 86 30.2


User provided reference genes

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