Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold180G39663 Striga asiatica HOM05D001678 ORTHO05D001698 2.3e-61 238.8 129 100.0
SGA_v2.0_scaffold46G17365 Striga asiatica HOM05D001678 ORTHO05D001698 5.5e-39 164.5 94 87.2
SGA_v2.0_scaffold3280G54305 Striga asiatica HOM05D001678 ORTHO05D001698 4.0e-37 158.3 94 83.0
SGA_v2.0_scaffold97G29236 Striga asiatica HOM05D001678 ORTHO05D001698 6.3e-35 151.0 80 92.5
SGA_v2.0_scaffold414G51212 Striga asiatica HOM05D001678 ORTHO05D001698 5.5e-31 137.9 95 73.7
SGA_v2.0_scaffold296G47542 Striga asiatica HOM05D001678 ORTHO05D001698 2.3e-29 132.5 95 77.9
SGA_v2.0_scaffold68G22949 Striga asiatica HOM05D001678 ORTHO05D001698 2.0e-25 119.4 95 66.3
SGA_v2.0_scaffold172G38953 Striga asiatica HOM05D000077 ORTHO05D005617 9.8e-20 100.5 59 81.4
Oeu059447.1 Olea europaea HOM05D001678 ORTHO05D001698 2.5e-15 85.9 76 59.2
Oeu041480.1 Olea europaea HOM05D001678 ORTHO05D001698 9.5e-15 84.0 82 56.1
Oeu004532.1 Olea europaea HOM05D001678 ORTHO05D001698 1.6e-14 83.2 77 57.1
Oeu015820.2 Olea europaea HOM05D001678 ORTHO05D001698 6.2e-14 81.3 76 56.6
Oeu035952.1 Olea europaea HOM05D001678 ORTHO05D001698 1.4e-13 80.1 76 56.6
Oeu029512.1 Olea europaea HOM05D001678 ORTHO05D001698 5.2e-13 78.2 76 55.3
Oeu043769.1 Olea europaea HOM05D001574 ORTHO05D001698 4.4e-12 75.1 113 43.4
SGA_v2.0_scaffold177G39408 Striga asiatica HOM05D001678 ORTHO05D001698 9.2e-10 67.4 83 43.4
SGA_v2.0_scaffold27G11443 Striga asiatica HOM05D001678 ORTHO05D001698 9.2e-10 67.4 83 44.6
SGA_v2.0_scaffold68G22889 Striga asiatica HOM05D001678 ORTHO05D001698 9.2e-10 67.4 83 44.6
SGA_v2.0_scaffold612G53189 Striga asiatica HOM05D001678 ORTHO05D001698 1.2e-09 67.0 83 44.6
Oeu061131.1 Olea europaea HOM05D001678 ORTHO05D001698 2.7e-09 65.9 75 50.7
SGA_v2.0_scaffold25G11062 Striga asiatica HOM05D001678 ORTHO05D001698 2.7e-09 65.9 74 47.3
Lj4C317T2 Lonicera japonica HOM05D000034 ORTHO05D001698 1.0e-08 63.9 124 39.5
Prupe.3G105400 Prunus persica HOM05D001678 ORTHO05D001698 1.3e-08 63.5 92 45.7
RcHm_v2.0_Chr7g0220391 Rosa chinensis HOM05D001678 ORTHO05D001698 1.3e-08 63.5 105 39.0
Lj2A433T12 Lonicera japonica HOM05D001678 ORTHO05D001698 2.3e-08 62.8 124 38.7
Lj3C974T6 Lonicera japonica HOM05D000034 ORTHO05D001698 2.3e-08 62.8 124 38.7
Atru.chr2.502 Acer truncatum HOM05D001678 ORTHO05D001698 5.0e-08 61.6 84 42.9
SGA_v2.0_scaffold2614G54162 Striga asiatica HOM05D001678 ORTHO05D001698 5.0e-08 61.6 83 43.4
Prupe.4G168300 Prunus persica HOM05D001678 ORTHO05D001698 6.6e-08 61.2 94 42.6
SGA_v2.0_scaffold1090G53835 Striga asiatica HOM05D001678 ORTHO05D001698 6.6e-08 61.2 95 42.1
Prupe.1G177900 Prunus persica HOM05D001678 ORTHO05D001698 8.6e-08 60.8 84 45.2
Atru.chr7.1165 Acer truncatum HOM05D001678 ORTHO05D001698 1.1e-07 60.5 72 47.2
Atru.chr4.878 Acer truncatum HOM05D001678 ORTHO05D001698 1.5e-07 60.1 72 48.6
Atru.chr6.809 Acer truncatum HOM05D001678 ORTHO05D001698 1.5e-07 60.1 96 40.6
FAN12G1326 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.5e-07 60.1 80 41.2
Oeu051357.1 Olea europaea HOM05D001678 ORTHO05D001698 1.5e-07 60.1 89 39.3
Oeu039328.1 Olea europaea HOM05D001678 ORTHO05D001698 2.5e-07 59.3 71 45.1
FAN08G3647 Fragaria x ananassa HOM05D001678 ORTHO05D001698 3.3e-07 58.9 85 38.8
FAN10G0526 Fragaria x ananassa HOM05D001678 ORTHO05D001698 3.3e-07 58.9 85 38.8
RcHm_v2.0_Chr6g0281401 Rosa chinensis HOM05D001678 ORTHO05D001698 4.3e-07 58.5 101 35.6
Lj8A161T43 Lonicera japonica HOM05D001678 ORTHO05D001698 7.3e-07 57.8 118 38.1
FvH4_4g17330 Fragaria vesca HOM05D001678 ORTHO05D001698 2.1e-06 56.2 78 41.0
FAN12G3116 Fragaria x ananassa HOM05D001678 ORTHO05D001698 2.1e-06 56.2 80 38.8
Prupe.1G170700 Prunus persica HOM05D001678 ORTHO05D001698 2.1e-06 56.2 94 40.4
Atru.chr13.2422 Acer truncatum HOM05D001678 ORTHO05D001698 3.6e-06 55.5 88 38.6
Atru.chr5.2051 Acer truncatum HOM05D001678 ORTHO05D001698 3.6e-06 55.5 88 38.6
FvH4_6g24700 Fragaria vesca HOM05D001678 ORTHO05D001698 3.6e-06 55.5 85 37.6
RcHm_v2.0_Chr4g0409291 Rosa chinensis HOM05D001678 ORTHO05D001698 3.6e-06 55.5 95 35.8
FAN24G2506 Fragaria x ananassa HOM05D001678 ORTHO05D001698 4.7e-06 55.1 85 34.1
FvH4_2g33311 Fragaria vesca HOM05D001678 ORTHO05D001698 6.2e-06 54.7 85 36.5
Oeu041525.1 Olea europaea HOM05D001678 ORTHO05D001698 6.2e-06 54.7 40 65.0
Prupe.7G105100 Prunus persica HOM05D001678 ORTHO05D001698 6.2e-06 54.7 83 37.3
Glyma.14G219200 Glycine max HOM05D001678 ORTHO05D001698 8.1e-06 54.3 91 39.6
Prupe.7G010100 Prunus persica HOM05D001678 ORTHO05D001698 8.1e-06 54.3 72 44.4


User provided reference genes

Program Settings