Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G08192 Striga asiatica HOM05D004824 ORTHO05D003903 7.1e-223 776.9 390 100.0
CAN.G1642.5 Capsicum annuum HOM05D004824 ORTHO05D003903 5.8e-23 112.8 214 37.4
Peaxi162Scf00222g00211 Petunia axillaris HOM05D004824 ORTHO05D003903 2.8e-17 94.0 212 35.4
COL.COLO4_22429 Corchorus olitorius HOM05D000173 ORTHO05D003903 1.2e-15 88.6 236 27.1
AT1G13800 Arabidopsis thaliana HOM05D004824 ORTHO05D003903 1.3e-14 85.1 198 25.8
TPR.G33705 Trifolium pratense HOM05D002450 ORTHO05D002953 1.4e-13 81.6 106 41.5
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 1.9e-13 81.3 288 26.7
Nitab4.5_0008978g0030 Nicotiana tabacum HOM05D004824 ORTHO05D003903 5.4e-13 79.7 136 36.8
Thhalv10009810m.g Eutrema salsugineum HOM05D004824 ORTHO05D017526 2.1e-12 77.8 294 22.4
SalBow7G1004 Salvia bowleyana HOM05D004824 ORTHO05D003903 2.7e-12 77.4 237 30.0
AL1G25600 Arabidopsis lyrata HOM05D004824 ORTHO05D003903 4.6e-12 76.6 141 27.7
Aa31LG5G8990 Aethionema arabicum HOM05D004824 ORTHO05D003903 1.0e-11 75.5 140 31.4
Carub.0004s0722 Capsella rubella HOM05D004824 ORTHO05D003903 2.3e-11 74.3 216 27.3
Peaxi162Scf00265g00033 Petunia axillaris HOM05D007893 ORTHO05D010042 6.6e-11 72.8 148 25.7
MSTRG.23210 Avicennia marina HOM05D007893 ORTHO05D010042 8.6e-11 72.4 133 29.3
Aqoxy1G00124 Aquilegia oxysepala HOM05D004824 ORTHO05D003903 1.9e-10 71.2 105 38.1
Lsat_1_v5_gn_1_54320 Lactuca sativa HOM05D004824 ORTHO05D003903 1.9e-10 71.2 240 25.4
CARHR014190 Cardamine hirsuta HOM05D004824 ORTHO05D003903 3.3e-10 70.5 141 27.0
AL4G19980 Arabidopsis lyrata HOM05D004824 ORTHO05D003903 5.6e-10 69.7 135 32.6
Lsat_1_v5_gn_1_52140 Lactuca sativa HOM05D004824 ORTHO05D003903 7.3e-10 69.3 242 24.4
TWI81G0227 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 9.6e-10 68.9 156 26.3
AagrBONN_evm.TU.Sc2ySwM_344.3513 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.6e-09 68.2 342 22.5
BolC4t23963H Brassica oleracea HOM05D004824 ORTHO05D003903 2.8e-09 67.4 136 30.1
A06p09890 Brassica napus HOM05D004824 ORTHO05D003903 4.7e-09 66.6 259 23.9
BraA06t24177Z Brassica rapa HOM05D004824 ORTHO05D003903 4.7e-09 66.6 259 23.9
AagrBONN_evm.TU.Sc2ySwM_117.2859 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.2e-09 66.2 342 21.9
BcaC02g10842 Brassica carinata HOM05D004824 ORTHO05D003903 6.2e-09 66.2 136 30.9
C04p24590 Brassica napus HOM05D004824 ORTHO05D003903 6.2e-09 66.2 136 30.9
BraA07t29506Z Brassica rapa HOM05D004824 ORTHO05D003903 6.2e-09 66.2 138 30.4
Gorai.004G065800 Gossypium raimondii HOM05D007893 ORTHO05D010042 6.2e-09 66.2 124 29.0
Lj1g0019375 Lotus japonicus HOM05D004824 ORTHO05D003903 6.2e-09 66.2 99 37.4
Solyc05g012920.3 Solanum lycopersicum HOM05D004824 ORTHO05D003903 6.2e-09 66.2 135 31.1
A07p17870 Brassica napus HOM05D004824 ORTHO05D003903 8.1e-09 65.9 138 30.4
BcaC05g25286 Brassica carinata HOM05D004824 ORTHO05D003903 1.1e-08 65.5 270 23.3
C05p11650 Brassica napus HOM05D004824 ORTHO05D003903 1.1e-08 65.5 270 23.3
BolC5t29912H Brassica oleracea HOM05D004824 ORTHO05D003903 1.1e-08 65.5 270 23.3
Lsat_1_v5_gn_1_52160 Lactuca sativa HOM05D004824 ORTHO05D003903 1.4e-08 65.1 158 27.2
arahy.Tifrunner.gnm1.ann1.F7MB9I Arachis hypogaea HOM05D004824 ORTHO05D003903 1.8e-08 64.7 378 20.9
Sp4g08720 Schrenkiella parvula HOM05D004824 ORTHO05D003903 1.8e-08 64.7 367 24.8
MSTRG.2666 Avicennia marina HOM05D004824 ORTHO05D003903 2.4e-08 64.3 195 30.8
Medtr8g463610 Medicago truncatula HOM05D006503 ORTHO05D008116 2.4e-08 64.3 262 24.8
CARHR098950 Cardamine hirsuta HOM05D002479 ORTHO05D002675 3.1e-08 63.9 282 23.0
Cfa012483 Carpinus fangiana HOM05D007893 ORTHO05D010042 3.1e-08 63.9 114 29.8
arahy.Tifrunner.gnm1.ann1.7C2XF6 Arachis hypogaea HOM05D007893 ORTHO05D010042 4.0e-08 63.5 111 29.7
arahy.Tifrunner.gnm1.ann1.AUE0A3 Arachis hypogaea HOM05D007893 ORTHO05D010042 4.0e-08 63.5 111 29.7
Eucgr.D01013 Eucalyptus grandis HOM05D006842 ORTHO05D008908 4.0e-08 63.5 263 24.7
MD14G1081200 Malus domestica HOM05D007893 ORTHO05D010042 4.0e-08 63.5 112 28.6
TAR626G0090 Trochodendron aralioides HOM05D006842 ORTHO05D008908 4.0e-08 63.5 289 22.5
arahy.Tifrunner.gnm1.ann1.40GBPJ Arachis hypogaea HOM05D007893 ORTHO05D010042 6.9e-08 62.8 111 29.7
AT3G09650 Arabidopsis thaliana HOM05D000855 ORTHO05D008530 1.2e-07 62.0 235 23.0
ECA240G1752 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.2e-07 62.0 238 24.4
arahy.Tifrunner.gnm1.ann1.LQ1LZI Arachis hypogaea HOM05D007409 ORTHO05D009264 1.5e-07 61.6 162 27.2
Haze_08182 Corylus avellana HOM05D007893 ORTHO05D010042 1.5e-07 61.6 112 29.5
Gohir.A08G137650 Gossypium hirsutum HOM05D000104 ORTHO05D008354 2.0e-07 61.2 343 20.4
CBR_g11913 Chara braunii HOM05D005833 ORTHO05D008135 2.6e-07 60.8 194 22.7
TWI39G0515 Tripterygium wilfordii HOM05D006156 ORTHO05D007699 2.6e-07 60.8 245 25.3
TAR374G1349 Trochodendron aralioides HOM05D007893 ORTHO05D010042 2.6e-07 60.8 109 30.3
vmacro09539 Vaccinium macrocarpon HOM05D004824 ORTHO05D003903 2.6e-07 60.8 177 24.9
Haze_23534 Corylus avellana HOM05D004783 ORTHO05D005581 3.4e-07 60.5 174 25.3
Dinv32060 Davidia involucrata HOM05D005973 ORTHO05D007285 3.4e-07 60.5 201 23.9
SHI33202 Sapria himalayana HOM05D008459 ORTHO05D003903 3.4e-07 60.5 160 31.9
Thhalv10001906m.g Eutrema salsugineum HOM05D004824 ORTHO05D003903 4.4e-07 60.1 311 24.4
Aa31LG3G2070 Aethionema arabicum HOM05D000855 ORTHO05D008530 5.8e-07 59.7 235 22.1
SHI28137 Sapria himalayana HOM05D008459 ORTHO05D003903 5.8e-07 59.7 74 44.6
A05p25680 Brassica napus HOM05D002479 ORTHO05D002675 9.9e-07 58.9 237 25.7
BolC8t50090H Brassica oleracea HOM05D000424 ORTHO05D000355 9.9e-07 58.9 342 20.5
Gohir.D12G065400 Gossypium hirsutum HOM05D000891 ORTHO05D000761 9.9e-07 58.9 198 20.7
Gorai.008G068700 Gossypium raimondii HOM05D000891 ORTHO05D000761 9.9e-07 58.9 198 20.7
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 9.9e-07 58.9 187 23.5
Sopen02g030320 Solanum pennellii HOM05D000891 ORTHO05D000761 9.9e-07 58.9 201 19.4
C08p24760 Brassica napus HOM05D000424 ORTHO05D000355 1.7e-06 58.2 304 19.7
TWI60G0064 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 2.2e-06 57.8 112 29.5
BraA05t21449Z Brassica rapa HOM05D002479 ORTHO05D002675 2.9e-06 57.4 237 25.7
ClCG08G000810 Citrullus lanatus HOM05D000001 ORTHO05D000003 2.9e-06 57.4 287 22.0
COL.COLO4_22110 Corchorus olitorius HOM05D000891 ORTHO05D000761 2.9e-06 57.4 195 24.6
ECA246G3641 Erigeron canadensis HOM05D005906 ORTHO05D007359 2.9e-06 57.4 79 38.0
FAN26G2049 Fragaria x ananassa HOM05D003561 ORTHO05D004351 2.9e-06 57.4 307 21.5
AT2G26790 Arabidopsis thaliana HOM05D004824 ORTHO05D003903 3.8e-06 57.0 138 29.7
Carub.0005s2821 Capsella rubella HOM05D003900 ORTHO05D005009 3.8e-06 57.0 193 25.4
FAN19G0232 Fragaria x ananassa HOM05D003561 ORTHO05D004351 3.8e-06 57.0 307 21.2
Glyma.01G016100 Glycine max HOM05D007893 ORTHO05D010042 3.8e-06 57.0 107 29.9
HanXRQChr03g0090051 Helianthus annuus HOM05D002785 ORTHO05D003042 3.8e-06 57.0 237 25.3
Rhsim05G0126600 Rhododendron simsii HOM05D005973 ORTHO05D007285 3.8e-06 57.0 195 23.6
AagrBONN_evm.TU.Sc2ySwM_344.5667 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.9e-06 56.6 325 20.6
Cfa013164 Carpinus fangiana HOM05D000001 ORTHO05D000003 4.9e-06 56.6 298 22.1
MBI18_g42841_MAGBIO Magnolia biondii HOM05D007893 ORTHO05D010042 4.9e-06 56.6 103 28.2
Prupe.2G027000 Prunus persica HOM05D005973 ORTHO05D007285 4.9e-06 56.6 204 24.0
vmacro04677 Vaccinium macrocarpon HOM05D004824 ORTHO05D003903 4.9e-06 56.6 106 33.0
Gohir.A06G121700 Gossypium hirsutum HOM05D000891 ORTHO05D000761 6.4e-06 56.2 156 27.6
PGR142G3186 Punica granatum HOM05D006842 ORTHO05D008908 6.4e-06 56.2 337 21.4
Thecc.03G306900 Theobroma cacao HOM05D007893 ORTHO05D010042 6.4e-06 56.2 174 25.9
TWI38G1496 Tripterygium wilfordii HOM05D000001 ORTHO05D000003 6.4e-06 56.2 134 32.1
Atru.BG.58.p Acer truncatum HOM05D000001 ORTHO05D000003 8.4e-06 55.8 312 21.8
AagrBONN_evm.TU.Sc2ySwM_368.2403 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.4e-06 55.8 342 23.4
MSTRG.19138 Avicennia marina HOM05D000855 ORTHO05D008530 8.4e-06 55.8 187 22.5
Nitab4.5_0006665g0020 Nicotiana tabacum HOM05D000162 ORTHO05D000090 8.4e-06 55.8 215 21.9
Sed0021439 Sechium edule HOM05D006156 ORTHO05D007699 8.4e-06 55.8 229 24.9
SEGI_16355 Sequoiadendron giganteum HOM05D004271 ORTHO05D006011 8.4e-06 55.8 90 34.4
HPP92_022591 Vanilla planifolia HOM05D007893 ORTHO05D010042 8.4e-06 55.8 91 34.1


User provided reference genes

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