Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold17G08138 Striga asiatica HOM05D046776 ORTHO05D404158 3.5e-132 474.9 235 100.0
SGA_v2.0_scaffold17G08126 Striga asiatica HOM05D046776 ORTHO05D403001 6.8e-19 98.6 119 47.9
SGA_v2.0_scaffold110G31266 Striga asiatica HOM05D027099 ORTHO05D399593 5.2e-11 72.4 146 36.3
Glyma.17G073500 Glycine max HOM05D000122 ORTHO05D000139 7.8e-07 58.5 37 73.0
Lalb_Chr23g0275671 Lupinus albus HOM05D000122 ORTHO05D000139 1.0e-06 58.2 37 73.0
SGA_v2.0_scaffold12G06003 Striga asiatica HOM05D000122 ORTHO05D000139 1.0e-06 58.2 38 71.1
Migut.K00322 Erythranthe guttata HOM05D000122 ORTHO05D000139 1.3e-06 57.8 38 68.4
Glyma.02G204300 Glycine max HOM05D000122 ORTHO05D000139 1.7e-06 57.4 37 70.3
Lj6g0009406 Lotus japonicus HOM05D000122 ORTHO05D000139 1.7e-06 57.4 37 70.3
Dinv41376 Davidia involucrata HOM05D000122 ORTHO05D000139 3.0e-06 56.6 38 68.4
Dinv43248 Davidia involucrata HOM05D000122 ORTHO05D000139 3.0e-06 56.6 38 68.4
Psat0s2403g0240 Pisum sativum HOM05D000122 ORTHO05D000139 3.0e-06 56.6 37 73.0
BcaB05g22388 Brassica carinata HOM05D000122 ORTHO05D000139 3.9e-06 56.2 37 67.6
C02p13740 Brassica napus HOM05D000122 ORTHO05D000139 3.9e-06 56.2 37 67.6
BolC2t07492H Brassica oleracea HOM05D000122 ORTHO05D000139 3.9e-06 56.2 37 67.6
Thhalv10012803m.g Eutrema salsugineum HOM05D000122 ORTHO05D000139 3.9e-06 56.2 37 67.6
HanXRQChr03g0065361 Helianthus annuus HOM05D000122 ORTHO05D000139 3.9e-06 56.2 38 68.4
Medtr4g130820 Medicago truncatula HOM05D000122 ORTHO05D000139 3.9e-06 56.2 37 70.3
SGA_v2.0_scaffold241G44183 Striga asiatica HOM05D039072 ORTHO05D405665 3.9e-06 56.2 191 27.2
CSS0025390 Camellia sinensis var. sinensis HOM05D000122 ORTHO05D000139 5.0e-06 55.8 37 70.3
TPR.G24869 Trifolium pratense HOM05D000122 ORTHO05D000139 5.0e-06 55.8 37 67.6
CARHR271720 Cardamine hirsuta HOM05D000122 ORTHO05D000139 6.6e-06 55.5 35 71.4
ECA234G2112 Erigeron canadensis HOM05D000122 ORTHO05D000139 6.6e-06 55.5 38 63.2
ECA236G3411 Erigeron canadensis HOM05D000122 ORTHO05D000139 6.6e-06 55.5 38 60.5
Hma1.2p1_0028F.1_g017590 Hydrangea macrophylla HOM05D000122 ORTHO05D000139 6.6e-06 55.5 37 70.3
Prupe.7G263200 Prunus persica HOM05D000122 ORTHO05D000139 6.6e-06 55.5 36 69.4
Ca_21129_v3 Cicer arietinum L. HOM05D000122 ORTHO05D000139 8.6e-06 55.1 37 70.3
SalBow1G0934 Salvia bowleyana HOM05D000122 ORTHO05D000139 8.6e-06 55.1 34 76.5


User provided reference genes

Program Settings