Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold177G39404 Striga asiatica HOM05D014377 ORTHO05D000006 1.8e-111 406.0 211 100.0
SGA_v2.0_scaffold82G26187 Striga asiatica HOM05D000003 ORTHO05D000006 3.0e-42 176.0 91 94.5
SGA_v2.0_scaffold261G45921 Striga asiatica HOM05D014377 ORTHO05D000006 6.3e-40 168.3 94 88.3
SGA_v2.0_scaffold141G35567 Striga asiatica HOM05D014377 ORTHO05D000006 9.0e-39 164.5 87 93.1
SGA_v2.0_scaffold3605G54368 Striga asiatica HOM05D014377 ORTHO05D000006 5.9e-38 161.8 87 90.8
SGA_v2.0_scaffold132G34510 Striga asiatica HOM05D014377 ORTHO05D000006 6.5e-37 158.3 83 91.6
SGA_v2.0_scaffold55G19857 Striga asiatica HOM05D014377 ORTHO05D000006 2.5e-36 156.4 83 91.6
SGA_v2.0_scaffold38G15068 Striga asiatica HOM05D000003 ORTHO05D000006 2.8e-32 142.9 83 83.1
SGA_v2.0_scaffold328G48786 Striga asiatica HOM05D014377 ORTHO05D000006 4.1e-31 139.0 73 94.5
SGA_v2.0_scaffold72G24142 Striga asiatica HOM05D014377 ORTHO05D000006 2.8e-24 116.3 170 45.3
SGA_v2.0_scaffold328G48789 Striga asiatica HOM05D000024 ORTHO05D000006 2.6e-17 93.2 63 79.4
SHI53523 Sapria himalayana HOM05D000003 ORTHO05D000004 4.7e-11 72.4 68 51.5
SHI54645 Sapria himalayana HOM05D000003 ORTHO05D000004 4.7e-11 72.4 68 51.5
PSO386G0019 Papaver somniferum HOM05D000003 ORTHO05D000006 6.8e-10 68.6 86 45.3
PGSC0003DMG400012502 Solanum tuberosum HOM05D000003 ORTHO05D000004 8.8e-10 68.2 84 41.7
PGSC0003DMG400023605 Solanum tuberosum HOM05D000003 ORTHO05D000004 8.8e-10 68.2 84 41.7
Sabra06G0000400 Salix brachista HOM05D000003 ORTHO05D000004 3.4e-09 66.2 83 37.3
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 9.8e-09 64.7 79 34.2
MBI03_g34697_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 9.8e-09 64.7 71 43.7
Psat4g054960 Pisum sativum HOM05D000003 ORTHO05D000006 9.8e-09 64.7 74 37.8
MBI01_g27614_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.3e-08 64.3 71 40.8
MBI01_g02761_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 2.2e-08 63.5 70 42.9
MBI05_g04117_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.2e-08 63.5 69 43.5
SHI41315 Sapria himalayana HOM05D000024 ORTHO05D000006 2.8e-08 63.2 83 39.8
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 2.8e-08 63.2 82 31.7
MBI17_g31746_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.7e-08 62.8 75 33.3
Sopen02g009750 Solanum pennellii HOM05D000003 ORTHO05D026164 3.7e-08 62.8 83 33.7
Atru.chr6.1051 Acer truncatum HOM05D000003 ORTHO05D000004 4.8e-08 62.4 84 33.3
SHI33976 Sapria himalayana HOM05D000024 ORTHO05D000006 4.8e-08 62.4 83 36.1
MBI10_g04437_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 8.3e-08 61.6 72 43.1
MBI16_g04481_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 8.3e-08 61.6 70 41.4
MBI15_g18587_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.1e-07 61.2 83 32.5
Oeu036834.1 Olea europaea HOM05D000024 ORTHO05D010916 1.1e-07 61.2 82 37.8
Aa31sc85G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-07 60.8 76 39.5
FvH4_4g13062 Fragaria vesca HOM05D000003 ORTHO05D011454 1.4e-07 60.8 87 34.5
MBI09_g04378_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.4e-07 60.8 79 41.8
Atru.chr2.1228 Acer truncatum HOM05D000003 ORTHO05D000006 1.8e-07 60.5 82 31.7
Aa31LG10G10100 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.8e-07 60.5 81 35.8
Aa31LG7G10780 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-07 60.5 71 38.0
Aa31sc85G90 Aethionema arabicum HOM05D000003 ORTHO05D000006 1.8e-07 60.5 79 38.0
MBI11_g15903_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 1.8e-07 60.5 75 40.0
SHI46154 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-07 60.5 83 36.1
SHI55178 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-07 60.5 83 37.3
MBI07_g42485_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 2.4e-07 60.1 172 29.7
Psat0s1308g0040 Pisum sativum HOM05D002636 ORTHO05D004459 2.4e-07 60.1 70 38.6
SHI45782 Sapria himalayana HOM05D000024 ORTHO05D000006 2.4e-07 60.1 55 47.3
Thecc.09G159900 Theobroma cacao HOM05D000024 ORTHO05D000006 2.4e-07 60.1 55 47.3
Atru.chr1.2519 Acer truncatum HOM05D000003 ORTHO05D002259 3.1e-07 59.7 75 36.0
Atru.chr3.3701 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-07 59.7 76 36.8
MBI18_g19074_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 3.1e-07 59.7 71 43.7
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 3.1e-07 59.7 73 39.7
PGSC0003DMG400035720 Solanum tuberosum HOM05D026012 ORTHO05D000006 3.1e-07 59.7 81 38.3
HPP92_023811 Vanilla planifolia HOM05D000003 ORTHO05D000004 3.1e-07 59.7 70 44.3
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.1e-07 59.3 78 39.7
QL12p002401 Quercus lobata HOM05D000003 ORTHO05D000006 4.1e-07 59.3 70 44.3
Rhsim01G0109500 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.1e-07 59.3 71 40.8
SHI37465 Sapria himalayana HOM05D000003 ORTHO05D000006 4.1e-07 59.3 80 37.5
Aa31LG3G6650 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-07 58.9 79 39.2
MBI16_g12294_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 5.4e-07 58.9 71 42.3
SHI07131 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-07 58.9 79 35.4
SHI34887 Sapria himalayana HOM05D000024 ORTHO05D000006 5.4e-07 58.9 57 45.6
SHI47765 Sapria himalayana HOM05D000003 ORTHO05D000004 5.4e-07 58.9 44 54.5
PGSC0003DMG400009747 Solanum tuberosum HOM05D000003 ORTHO05D000006 5.4e-07 58.9 80 35.0
Aa31sc734G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.0e-07 58.5 79 35.4
CiPaw.06G025000 Carya illinoinensis HOM05D000003 ORTHO05D000006 7.0e-07 58.5 69 37.7
MBI18_g23808_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 7.0e-07 58.5 69 43.5
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.1e-07 58.2 69 39.1
MBI02_g32911_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.1e-07 58.2 68 39.7
MBI05_g03468_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.1e-07 58.2 79 40.5
PSO017G6159 Papaver somniferum HOM05D000003 ORTHO05D000006 9.1e-07 58.2 80 33.8
SHI04747 Sapria himalayana HOM05D000024 ORTHO05D000006 9.1e-07 58.2 51 49.0
SHI30824 Sapria himalayana HOM05D000003 ORTHO05D000004 9.1e-07 58.2 83 33.7
HPP92_005179 Vanilla planifolia HOM05D000003 ORTHO05D000006 9.1e-07 58.2 71 38.0
Aa31LG6G15220 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-06 57.8 70 38.6
Oeu043929.1 Olea europaea HOM05D000003 ORTHO05D000006 1.2e-06 57.8 81 34.6
PSO017G6420 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-06 57.8 87 34.5
SHI34191 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 57.8 55 45.5
Atru.chr6.1886 Acer truncatum HOM05D000003 ORTHO05D000006 1.6e-06 57.4 76 38.2
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-06 57.4 66 33.3
FvH4_6g17161 Fragaria vesca HOM05D000003 ORTHO05D000006 1.6e-06 57.4 71 38.0
Nitab4.5_0000049g0230 Nicotiana tabacum HOM05D001426 ORTHO05D001389 1.6e-06 57.4 83 33.7
SHI49586 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-06 57.4 55 45.5
SHI54474 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-06 57.4 48 50.0
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-06 57.4 83 32.5
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.6e-06 57.4 83 32.5
SGA_v2.0_scaffold165G38191 Striga asiatica HOM05D000989 ORTHO05D001287 1.6e-06 57.4 34 67.6
Actinidia24025 Actinidia chinensis HOM05D000003 ORTHO05D000004 2.0e-06 57.0 71 35.2
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-06 57.0 78 37.2
Nn5g30273 Nelumbo nucifera HOM05D000003 ORTHO05D000004 2.0e-06 57.0 81 33.3
RcHm_v2.0_Chr6g0278601 Rosa chinensis HOM05D000003 ORTHO05D000004 2.0e-06 57.0 75 37.3
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-06 56.6 121 28.9
Aa31LG11G11010 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-06 56.6 73 35.6
Aa31LG11G5950 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-06 56.6 70 35.7
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.7e-06 56.6 77 36.4
MBI17_g23187_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 2.7e-06 56.6 75 33.3
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.7e-06 56.6 71 39.4
SHI28637 Sapria himalayana HOM05D000003 ORTHO05D000004 2.7e-06 56.6 57 43.9
SHI30822 Sapria himalayana HOM05D000003 ORTHO05D000004 2.7e-06 56.6 83 38.6
SHI43710 Sapria himalayana HOM05D000024 ORTHO05D000006 2.7e-06 56.6 92 32.6
SHI54405 Sapria himalayana HOM05D000024 ORTHO05D000006 2.7e-06 56.6 55 45.5
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 2.7e-06 56.6 83 32.5
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 2.7e-06 56.6 83 31.3
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 2.7e-06 56.6 81 37.0
TAR014G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.7e-06 56.6 71 39.4
Cpa.g.sc54.53 Carica papaya HOM05D000003 ORTHO05D000006 3.5e-06 56.2 74 35.1
MBI09_g13294_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.5e-06 56.2 70 34.3
MBI18_g26031_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.5e-06 56.2 71 42.3
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 3.5e-06 56.2 68 38.2
RcHm_v2.0_Chr5g0026401 Rosa chinensis HOM05D000003 ORTHO05D000006 3.5e-06 56.2 68 38.2
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 3.5e-06 56.2 78 32.1
SHI21498 Sapria himalayana HOM05D000024 ORTHO05D000006 3.5e-06 56.2 55 43.6
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 3.5e-06 56.2 78 32.1
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 3.5e-06 56.2 78 32.1
SHI29344 Sapria himalayana HOM05D000024 ORTHO05D000006 3.5e-06 56.2 55 43.6
SHI30807 Sapria himalayana HOM05D000003 ORTHO05D000004 3.5e-06 56.2 55 43.6
SHI43412 Sapria himalayana HOM05D000024 ORTHO05D000006 3.5e-06 56.2 61 42.6
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 3.5e-06 56.2 78 32.1
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 3.5e-06 56.2 78 32.1
SHI49069 Sapria himalayana HOM05D000024 ORTHO05D000006 3.5e-06 56.2 55 43.6
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 3.5e-06 56.2 73 38.4
TAR308G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000006 3.5e-06 56.2 71 36.6
Atru.chr2.258 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-06 55.8 70 31.4
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 4.5e-06 55.8 85 31.8
Aa31sc31G40 Aethionema arabicum HOM05D000003 ORTHO05D000411 4.5e-06 55.8 79 40.5
MBI03_g17137_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 4.5e-06 55.8 69 40.6
MBI05_g03451_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.5e-06 55.8 70 35.7
MBI19_g20143_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 4.5e-06 55.8 71 38.0
PSO339G5045 Papaver somniferum HOM05D000003 ORTHO05D000006 4.5e-06 55.8 77 35.1
SHI20839 Sapria himalayana HOM05D000003 ORTHO05D000004 4.5e-06 55.8 55 43.6
SHI47828 Sapria himalayana HOM05D000024 ORTHO05D000006 4.5e-06 55.8 58 44.8
SHI48005 Sapria himalayana HOM05D000024 ORTHO05D000006 4.5e-06 55.8 45 51.1
SHI49485 Sapria himalayana HOM05D000024 ORTHO05D000006 4.5e-06 55.8 43 53.5
SHI54624 Sapria himalayana HOM05D000024 ORTHO05D000006 4.5e-06 55.8 55 43.6
SHI54802 Sapria himalayana HOM05D000024 ORTHO05D000006 4.5e-06 55.8 83 34.9
SHI54862 Sapria himalayana HOM05D000024 ORTHO05D000006 4.5e-06 55.8 76 34.2
SEGI_28970 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 4.5e-06 55.8 81 37.0
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 4.5e-06 55.8 81 33.3
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 4.5e-06 55.8 83 31.3
THA.LOC104801863 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 4.5e-06 55.8 73 38.4
Atru.chr3.1881 Acer truncatum HOM05D000003 ORTHO05D000004 5.9e-06 55.5 77 36.4
Aa31LG5G23530 Aethionema arabicum HOM05D000003 ORTHO05D000006 5.9e-06 55.5 70 35.7
Aa31sc128G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.9e-06 55.5 69 36.2
Aa31sc248G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.9e-06 55.5 69 36.2
Manes.12G044467 Manihot esculenta HOM05D000003 ORTHO05D000006 5.9e-06 55.5 70 37.1
Psat1g196480 Pisum sativum HOM05D000003 ORTHO05D037377 5.9e-06 55.5 70 35.7
RcHm_v2.0_Chr3g0455401 Rosa chinensis HOM05D000003 ORTHO05D000004 5.9e-06 55.5 68 38.2
SHI30661 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.5 55 43.6
SHI30886 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.5 71 33.8
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 5.9e-06 55.5 78 32.1
SHI35428 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.5 60 41.7
SHI37947 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.5 75 34.7
SHI43597 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.5 74 36.5
SHI54521 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.5 55 43.6
SHI54616 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.5 55 43.6
SHI55059 Sapria himalayana HOM05D000024 ORTHO05D000006 5.9e-06 55.5 55 43.6
SHI55139 Sapria himalayana HOM05D000003 ORTHO05D000004 5.9e-06 55.5 55 43.6
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 5.9e-06 55.5 81 34.6
SGA_v2.0_scaffold1G00690 Striga asiatica HOM05D000003 ORTHO05D000004 5.9e-06 55.5 80 35.0
Atru.chr1.2603 Acer truncatum HOM05D000003 ORTHO05D000004 7.7e-06 55.1 73 30.1
Aa31LG2G14760 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.7e-06 55.1 71 35.2
Aa31LG7G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.7e-06 55.1 71 35.2
BcaB01g02268 Brassica carinata HOM05D000003 ORTHO05D000411 7.7e-06 55.1 88 35.2
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 7.7e-06 55.1 72 38.9
CSS0017081 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.7e-06 55.1 80 36.2
MBI08_g03694_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 7.7e-06 55.1 74 36.5
SHI30884 Sapria himalayana HOM05D000024 ORTHO05D000006 7.7e-06 55.1 49 49.0
SHI37974 Sapria himalayana HOM05D000024 ORTHO05D000006 7.7e-06 55.1 75 34.7
SHI55174 Sapria himalayana HOM05D000024 ORTHO05D000006 7.7e-06 55.1 66 36.4
Hund16357 Selenicereus undatus HOM05D000003 ORTHO05D000006 7.7e-06 55.1 77 35.1
SEGI_34417 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 7.7e-06 55.1 85 32.9
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 7.7e-06 55.1 83 30.1
Sopen04g007290 Solanum pennellii HOM05D000003 ORTHO05D000006 7.7e-06 55.1 79 31.6


User provided reference genes

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