Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G39016 Striga asiatica HOM05D004162 ORTHO05D004543 8.4e-279 963.0 470 100.0
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 1.1e-190 670.2 475 67.4
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 2.7e-184 649.0 472 64.6
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 6.2e-181 637.9 475 66.3
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 1.8e-180 636.3 475 66.1
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 1.5e-174 616.7 475 61.7
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 3.2e-169 599.0 476 60.5
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 5.3e-164 581.6 475 58.9
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 1.3e-162 577.0 471 59.2
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 1.2e-160 570.5 473 58.4
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 4.6e-160 568.5 475 59.8
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 1.3e-159 567.0 474 58.2
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 6.7e-159 564.7 470 57.2
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 6.7e-159 564.7 470 57.4
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 2.8e-157 559.3 470 57.2
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 6.9e-156 554.7 470 56.8
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 9.0e-156 554.3 470 56.0
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 3.8e-154 548.9 420 61.4
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 2.5e-145 519.6 470 53.8
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 2.1e-144 516.5 544 48.2
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 8.8e-143 511.1 473 53.1
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 2.0e-142 510.0 470 53.2
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 2.0e-142 510.0 473 52.6
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 9.7e-142 507.7 475 53.7
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 1.7e-141 506.9 471 52.0
unitig_22.g6151 Utricularia gibba HOM05D004162 ORTHO05D004543 4.8e-141 505.4 476 52.9
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 6.3e-141 505.0 474 51.5
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 8.2e-141 504.6 473 52.0
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 1.4e-140 503.8 475 53.5
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 3.8e-138 495.7 474 51.9
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 1.9e-137 493.4 470 52.8
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 3.6e-136 489.2 494 50.2
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 4.7e-136 488.8 430 53.0
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 6.3e-133 478.4 472 48.3
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 1.8e-132 476.9 513 47.6
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 9.1e-132 474.6 473 49.9
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 7.2e-129 464.9 473 50.3
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 3.6e-128 462.6 470 50.0
Thecc.03G055600 Theobroma cacao HOM05D004162 ORTHO05D004543 4.7e-128 462.2 452 49.3
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 8.0e-128 461.5 472 49.6
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 5.2e-127 458.8 475 48.4
DCAR_003065 Daucus carota HOM05D004162 ORTHO05D004543 3.3e-126 456.1 377 56.0
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 4.8e-125 452.2 472 48.5
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 6.3e-125 451.8 474 50.0
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 1.8e-124 450.3 471 48.8
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 3.1e-124 449.5 472 48.9
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 1.6e-123 447.2 472 48.3
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 4.5e-123 445.7 461 49.2
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 2.9e-114 416.4 472 47.0
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 2.9e-114 416.4 478 46.4
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 1.5e-110 404.1 469 45.4
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 9.8e-110 401.4 431 47.8
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 1.4e-108 397.5 471 46.3
TAR636G2328 Trochodendron aralioides HOM05D004162 ORTHO05D004543 2.0e-107 393.7 382 52.1
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 5.0e-106 389.0 478 43.5
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 9.5e-105 384.8 471 42.3
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 1.6e-104 384.0 471 42.3
Peaxi162Scf00420g00077 Petunia axillaris HOM05D004162 ORTHO05D004543 1.6e-104 384.0 485 43.3
Gohir.A12G191000 Gossypium hirsutum HOM05D004162 ORTHO05D004543 2.1e-104 383.6 471 42.5
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 3.1e-103 379.8 473 44.4
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 8.9e-103 378.3 483 44.1
COL.COLO4_05717 Corchorus olitorius HOM05D004162 ORTHO05D004543 8.9e-103 378.3 379 48.3
Prupe.5G233900 Prunus persica HOM05D004162 ORTHO05D004543 3.2e-100 369.8 386 51.6
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 5.4e-100 369.0 475 43.8
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 5.4e-100 369.0 541 40.5
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 9.2e-100 368.2 471 43.1
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 3.5e-99 366.3 471 42.7
Ca_17185_v3 Cicer arietinum L. HOM05D004162 ORTHO05D004543 7.3e-97 358.6 479 42.0
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 1.6e-96 357.5 404 47.0
Rhsim08G0126500 Rhododendron simsii HOM05D004162 ORTHO05D004543 2.1e-96 357.1 264 61.4
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 6.2e-96 355.5 484 43.6
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 5.2e-95 352.4 430 44.9
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 6.8e-95 352.1 474 41.6
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 4.9e-93 345.9 474 41.6
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 4.9e-93 345.9 474 41.6
VMungo0251G2472 Vigna mungo HOM05D004162 ORTHO05D004543 4.9e-93 345.9 458 41.5
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 7.1e-92 342.0 474 41.4
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 2.1e-91 340.5 474 42.6
PSO339G4834 Papaver somniferum HOM05D004162 ORTHO05D004543 7.8e-91 338.6 470 43.6
HPP92_005364 Vanilla planifolia HOM05D004162 ORTHO05D004543 7.8e-91 338.6 477 41.7
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 3.3e-89 333.2 475 40.8
PSO513G0134 Papaver somniferum HOM05D004162 ORTHO05D004543 3.3e-89 333.2 470 42.8
Medtr8g107380 Medicago truncatula HOM05D004162 ORTHO05D004543 9.5e-89 331.6 475 40.4
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 1.2e-88 331.3 505 38.8
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 4.7e-88 329.3 509 38.5
Aa31LG5G17260 Aethionema arabicum HOM05D004162 ORTHO05D004543 2.0e-86 323.9 476 40.8
BraA10t45047Z Brassica rapa HOM05D004162 ORTHO05D004543 7.5e-86 322.0 471 41.8
C09p70490 Brassica napus HOM05D004162 ORTHO05D004543 1.7e-85 320.9 469 42.0
AL6G16350 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 3.7e-85 319.7 470 40.9
BolC9t59794H Brassica oleracea HOM05D004162 ORTHO05D004543 4.9e-85 319.3 469 40.9
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 1.4e-84 317.8 469 39.9
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 4.1e-84 316.2 489 39.5
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 7.1e-84 315.5 471 38.4
A10p30070 Brassica napus HOM05D004162 ORTHO05D004543 7.1e-84 315.5 469 41.4
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 1.6e-83 314.3 469 38.2
Sp6g36540 Schrenkiella parvula HOM05D004162 ORTHO05D004543 1.6e-83 314.3 468 40.0
Thhalv10028628m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 2.1e-83 313.9 487 39.0
Phvul.002G330500 Phaseolus vulgaris HOM05D004162 ORTHO05D004543 7.8e-83 312.0 306 50.3
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 1.0e-82 311.6 471 39.9
Thhalv10013532m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 1.3e-82 311.2 468 40.4
THA.LOC104810218 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 1.7e-82 310.8 482 37.8
THA.LOC104826807 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 1.7e-82 310.8 482 37.8
AT5G06310 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 3.0e-82 310.1 471 39.9
Sp6g08970 Schrenkiella parvula HOM05D004162 ORTHO05D004543 3.9e-82 309.7 493 38.5
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 2.5e-81 307.0 469 37.5
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 2.1e-80 303.9 458 38.6
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 3.6e-80 303.1 470 39.1
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 6.2e-80 302.4 487 38.6
CDE11G0199 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 4.0e-79 299.7 310 52.3
CARHR207050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 1.2e-78 298.1 470 37.9
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 2.6e-78 297.0 484 38.2
Oeu011444.1 Olea europaea HOM05D004162 ORTHO05D004543 1.7e-77 294.3 469 36.2
A09p20680 Brassica napus HOM05D004162 ORTHO05D004543 6.4e-77 292.4 475 40.2
AUR62037555 Chenopodium quinoa HOM05D004162 ORTHO05D004543 6.4e-77 292.4 334 42.8
BcaC04g21892 Brassica carinata HOM05D004162 ORTHO05D004543 7.1e-76 288.9 484 39.0
C09p26100 Brassica napus HOM05D004162 ORTHO05D004543 7.1e-76 288.9 484 39.0
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 1.2e-75 288.1 475 36.8
BraA09t37672Z Brassica rapa HOM05D004162 ORTHO05D004543 1.6e-75 287.7 478 40.0
Zm00001eb433700 Zea mays HOM05D004162 ORTHO05D004543 1.6e-75 287.7 470 37.9
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 3.5e-75 286.6 460 35.9
PSO832G0101 Papaver somniferum HOM05D004162 ORTHO05D004543 6.0e-75 285.8 471 38.4
BolC9t55513H Brassica oleracea HOM05D004162 ORTHO05D004543 1.0e-74 285.0 484 38.6
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 3.9e-74 283.1 388 42.0
Cc07_g00810 Coffea canephora HOM05D004162 ORTHO05D004543 1.5e-73 281.2 470 35.5
unitig_90.g27442 Utricularia gibba HOM05D004162 ORTHO05D004543 3.6e-72 276.6 449 38.8
Sc04g0004810 Simmondsia chinensis HOM05D004162 ORTHO05D004543 9.0e-71 271.9 324 44.1
BcaB07g30993 Brassica carinata HOM05D004162 ORTHO05D004543 3.4e-70 270.0 481 38.3
BcaC06g32364 Brassica carinata HOM05D004162 ORTHO05D004543 4.4e-70 269.6 471 38.2
Ciclev10005180m.g Citrus clementina HOM05D004162 ORTHO05D004543 1.7e-69 267.7 383 39.9
SHI19078 Sapria himalayana HOM05D004162 ORTHO05D004543 2.7e-67 260.4 260 50.4
Potri.012G046400 Populus trichocarpa HOM05D004162 ORTHO05D004543 1.7e-66 257.7 268 48.5
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 3.3e-65 253.4 481 36.4
Pp3c18_21900 Physcomitrium patens HOM05D004162 ORTHO05D004543 5.6e-65 252.7 507 33.9
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 1.8e-63 247.7 508 34.4
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis HOM05D004162 ORTHO05D004543 2.4e-63 247.3 503 35.6
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 1.7e-61 241.1 326 39.6
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 2.2e-61 240.7 495 32.5
Hma1.2p1_0013F.1_g007880 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 6.0e-59 232.6 304 40.8
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 2.6e-54 217.2 525 32.6
VMungo0251G0610 Vigna mungo HOM05D004162 ORTHO05D004543 1.9e-52 211.1 432 33.3
CDE02G0891 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 9.3e-52 208.8 196 52.6
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 3.9e-50 203.4 309 38.2
Carub.0003s2670 Capsella rubella HOM05D004162 ORTHO05D004543 3.8e-45 186.8 366 37.2
Lj4g0021249 Lotus japonicus HOM05D002609 ORTHO05D002820 1.4e-44 184.9 262 38.5
TPR.G1445 Trifolium pratense HOM05D004162 ORTHO05D004543 4.2e-44 183.3 292 40.1
AUR62019586 Chenopodium quinoa HOM05D004162 ORTHO05D004543 3.9e-42 176.8 136 56.6
Cfa023195 Carpinus fangiana HOM05D004162 ORTHO05D004543 5.7e-41 172.9 298 34.2
AUR62013945 Chenopodium quinoa HOM05D004162 ORTHO05D004543 1.2e-38 165.2 164 48.8
CiPaw.09G010800 Carya illinoinensis HOM05D004162 ORTHO05D004543 8.5e-37 159.1 203 43.3
Hund17739 Selenicereus undatus HOM05D004162 ORTHO05D004543 6.3e-32 142.9 178 44.9
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 1.5e-25 121.7 439 27.8
HPP92_005316 Vanilla planifolia HOM05D004162 ORTHO05D004543 1.3e-24 118.6 209 35.4
Sabra12G0032500 Salix brachista HOM05D004162 ORTHO05D004543 1.8e-15 88.2 84 52.4
SEGI_33776 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 2.9e-13 80.9 128 35.2
Haze_09935 Corylus avellana HOM05D001513 ORTHO05D004543 3.8e-13 80.5 63 55.6
SEGI_28626 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 1.1e-12 79.0 137 39.4
VMungo0464G1805 Vigna mungo HOM05D004162 ORTHO05D004543 6.1e-11 73.2 99 44.4
CiPaw.09G010700 Carya illinoinensis HOM05D004162 ORTHO05D004543 1.0e-10 72.4 134 36.6
VMungo0464G1157 Vigna mungo HOM05D004162 ORTHO05D004543 1.4e-10 72.0 99 42.4
QL10p030172 Quercus lobata HOM05D004162 ORTHO05D004543 2.0e-09 68.2 64 46.9
Lj1g0024684 Lotus japonicus HOM05D004162 ORTHO05D004543 4.8e-08 63.5 58 51.7
AT2G04395 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 6.3e-08 63.2 82 34.1
ATR1149G147 Amborella trichopoda HOM05D004162 ORTHO05D004543 2.4e-07 61.2 144 31.9
Cpa.g.sc10.94 Carica papaya HOM05D004162 ORTHO05D004543 4.5e-06 57.0 40 67.5


User provided reference genes

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