Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 0.0e+00 1612.8 938 100.0
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 6.2e-148 529.3 703 48.9
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 3.1e-139 500.4 986 46.6
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 5.6e-133 479.6 746 45.4
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 6.9e-131 472.6 692 47.3
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 1.1e-125 455.3 720 44.0
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 1.3e-124 451.8 1034 41.9
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 6.3e-124 449.5 1022 43.8
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 6.9e-123 446.0 974 43.7
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 2.6e-122 444.1 742 43.7
Oeu041836.1 Olea europaea HOM05D006512 ORTHO05D008027 1.0e-118 432.2 883 46.4
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 1.8e-118 431.4 982 42.6
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 5.1e-118 429.9 786 40.7
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 2.5e-117 427.6 974 44.6
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 4.8e-116 423.3 700 43.0
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 1.4e-115 421.8 1020 41.9
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 9.1e-115 419.1 1015 40.6
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 3.2e-112 410.6 743 40.1
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 4.2e-112 410.2 744 40.5
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 5.5e-112 409.8 726 41.9
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 5.5e-112 409.8 977 42.0
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 5.5e-112 409.8 1000 41.3
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 3.6e-111 407.1 698 42.4
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 1.4e-110 405.2 785 40.1
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 3.7e-108 397.1 706 39.7
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 4.8e-108 396.7 737 41.0
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 8.2e-108 396.0 733 40.2
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 1.4e-107 395.2 693 42.4
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 1.8e-107 394.8 746 41.0
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 5.3e-107 393.3 726 41.3
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 7.0e-107 392.9 768 38.5
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 4.5e-106 390.2 734 39.1
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 7.7e-106 389.4 761 39.6
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 1.0e-105 389.0 975 38.8
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 3.8e-105 387.1 720 41.2
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 5.0e-105 386.7 992 38.3
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 6.5e-105 386.3 771 39.7
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 4.2e-104 383.6 572 45.3
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 5.5e-104 383.3 750 38.8
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 1.6e-103 381.7 982 39.3
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 1.6e-103 381.7 579 45.6
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 2.1e-103 381.3 691 40.1
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 6.1e-103 379.8 542 45.4
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 1.0e-102 379.0 782 37.3
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.4e-102 378.6 717 40.7
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 3.3e-101 374.0 721 40.8
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 4.4e-101 373.6 722 40.3
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 6.3e-100 369.8 733 40.8
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 3.1e-99 367.5 987 38.2
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 5.9e-98 363.2 989 37.8
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 2.5e-96 357.8 716 39.0
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 7.2e-96 356.3 985 38.0
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 3.6e-95 354.0 712 39.2
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 7.5e-93 346.3 753 38.1
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 7.0e-91 339.7 712 37.5
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 9.1e-91 339.3 772 35.8
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 9.1e-91 339.3 619 41.0
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 9.1e-91 339.3 771 36.6
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 5.9e-90 336.7 676 39.2
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 1.3e-89 335.5 666 38.4
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 3.8e-89 334.0 666 38.1
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 5.0e-89 333.6 660 38.5
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 1.9e-88 331.6 746 37.4
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 2.7e-87 327.8 750 37.6
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 4.7e-87 327.0 990 38.7
Solyc10g006260.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 7.5e-85 319.7 847 42.1
Phvul.008G270300 Phaseolus vulgaris HOM05D006512 ORTHO05D008027 4.8e-84 317.0 607 40.7
CSS0048002 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 8.3e-84 316.2 528 44.1
LjContig00272g0012578 Lotus japonicus HOM05D006512 ORTHO05D008027 7.0e-83 313.2 560 43.2
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 9.1e-83 312.8 739 35.3
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 1.6e-82 312.0 819 35.8
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 8.6e-81 306.2 738 36.3
Gohir.A04G013500 Gossypium hirsutum HOM05D006512 ORTHO05D008027 8.6e-81 306.2 527 42.3
Gorai.009G441100 Gossypium raimondii HOM05D006512 ORTHO05D008027 1.1e-80 305.8 798 41.0
Potri.001G356800 Populus trichocarpa HOM05D006512 ORTHO05D008027 6.8e-78 296.6 836 36.4
Manes.03G133700 Manihot esculenta HOM05D006512 ORTHO05D008027 1.4e-75 288.9 516 42.4
Duzib170G0430 Durio zibethinus HOM05D006512 ORTHO05D008027 2.4e-75 288.1 784 38.8
Eucgr.F00738 Eucalyptus grandis HOM05D006512 ORTHO05D008027 5.4e-75 287.0 509 42.2
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 7.0e-75 286.6 751 32.5
FvH4_3g23160 Fragaria vesca HOM05D006512 ORTHO05D008027 1.2e-74 285.8 593 39.8
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 5.9e-74 283.5 817 33.8
PSO675G4144 Papaver somniferum HOM05D006512 ORTHO05D008027 3.8e-73 280.8 619 37.2
HanXRQChr11g0335931 Helianthus annuus HOM05D006512 ORTHO05D008027 1.6e-71 275.4 789 42.0
Sc03g0008470 Simmondsia chinensis HOM05D006512 ORTHO05D008027 8.0e-71 273.1 522 40.8
Ca_06341_v3 Cicer arietinum L. HOM05D006512 ORTHO05D008027 2.2e-68 265.0 548 38.9
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 3.7e-68 264.2 378 45.5
QL08p009135 Quercus lobata HOM05D006512 ORTHO05D008027 2.7e-66 258.1 811 37.7
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 1.1e-64 252.7 364 43.1
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 4.0e-62 244.2 368 46.5
Sp6g17030 Schrenkiella parvula HOM05D006512 ORTHO05D008027 1.2e-61 242.7 532 37.2
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 1.3e-60 239.2 755 31.5
MD11G1213200 Malus domestica HOM05D006512 ORTHO05D008027 5.4e-59 233.8 506 40.1
CDE04G1000 Ceratophyllum demersum HOM05D006512 ORTHO05D008027 1.6e-58 232.3 607 34.3
Lalb_Chr17g0348651 Lupinus albus HOM05D006512 ORTHO05D008027 7.5e-53 213.4 523 37.9
GSVIVG01037687001 Vitis vinifera HOM05D006512 ORTHO05D008027 7.8e-50 203.4 357 42.3
Dinv40780 Davidia involucrata HOM05D006512 ORTHO05D008027 1.2e-45 189.5 623 43.8
Cc05_g14000 Coffea canephora HOM05D006512 ORTHO05D008027 5.4e-43 180.6 677 38.0
Psat2g014000 Pisum sativum HOM05D006512 ORTHO05D008027 7.8e-42 176.8 515 35.7
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 2.6e-37 161.8 754 26.0
AT5G55100 Arabidopsis thaliana HOM05D006512 ORTHO05D008027 4.9e-36 157.5 526 33.8
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 9.3e-35 153.3 536 28.9
Cc05_g14010 Coffea canephora HOM05D006512 ORTHO05D008027 1.7e-33 149.1 143 53.1
Solyc10g006250.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 4.3e-32 144.4 143 60.1
QL08p009130 Quercus lobata HOM05D006512 ORTHO05D008027 5.8e-29 134.0 146 56.8
GSVIVG01037689001 Vitis vinifera HOM05D006512 ORTHO05D008027 5.8e-29 134.0 144 47.9
Zm00001eb360910 Zea mays HOM05D006512 ORTHO05D008027 9.9e-29 133.3 537 27.9
Eucgr.F00737 Eucalyptus grandis HOM05D006512 ORTHO05D008027 6.4e-28 130.6 148 57.4
CARHR268440 Cardamine hirsuta HOM05D006512 ORTHO05D008027 9.3e-27 126.7 148 49.3
HanXRQChr11g0335921 Helianthus annuus HOM05D006512 ORTHO05D008027 1.0e-25 123.2 143 46.9
Lalb_Chr17g0348641 Lupinus albus HOM05D006512 ORTHO05D008027 2.3e-25 122.1 159 49.1
MD11G1213100 Malus domestica HOM05D006512 ORTHO05D008027 4.0e-22 111.3 150 42.7
CANSAT56G4300 Cannabis sativa HOM05D006512 ORTHO05D008027 1.1e-19 103.2 139 46.0
CBR_g49368 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-09 69.7 80 45.0
Cre11.g481700 Chlamydomonas reinhardtii HOM05D006512 ORTHO05D008027 7.4e-08 63.9 63 46.0
VMungo0251G0907 Vigna mungo HOM05D001291 ORTHO05D008027 6.9e-06 57.4 70 45.7


User provided reference genes

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