Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 0.0e+00 1297.3 689 100.0
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 1.0e-224 783.9 702 63.5
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 2.2e-219 766.1 695 65.5
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 3.3e-215 752.3 705 61.6
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 9.1e-197 691.0 701 58.2
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 4.7e-169 599.0 690 50.4
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 6.8e-168 595.1 689 50.1
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 1.5e-167 594.0 691 50.9
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 3.8e-163 579.3 690 49.1
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 1.8e-160 570.5 689 48.2
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 9.8e-159 564.7 687 50.8
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 2.2e-158 563.5 701 47.8
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 7.0e-149 531.9 685 48.8
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 7.0e-149 531.9 705 46.1
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 6.4e-142 508.8 684 47.5
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 3.0e-139 500.0 636 46.7
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.8e-136 490.7 691 45.6
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 1.2e-129 468.0 700 43.4
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 5.8e-127 459.1 698 43.8
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 8.7e-123 445.3 705 42.1
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 4.3e-122 443.0 710 41.8
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 3.6e-121 439.9 705 43.0
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 6.2e-121 439.1 705 42.7
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 1.4e-120 438.0 705 42.6
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.6e-119 433.7 694 42.4
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 2.2e-118 430.6 700 42.4
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 1.1e-117 428.3 698 43.0
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 5.4e-117 426.0 698 42.6
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 2.8e-113 413.7 688 42.0
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 1.2e-111 408.3 708 39.8
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 4.5e-111 406.4 688 41.3
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 6.0e-108 396.0 705 38.3
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 3.3e-106 390.2 691 40.1
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 5.6e-106 389.4 696 39.8
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 4.9e-102 376.3 699 39.5
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 8.4e-102 375.6 459 51.0
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 2.7e-100 370.5 690 40.1
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 1.5e-98 364.8 670 39.4
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 7.4e-98 362.5 751 37.2
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 8.2e-97 359.0 371 57.1
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 3.4e-95 353.6 688 36.8
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 5.9e-95 352.8 702 37.9
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.7e-94 351.3 701 36.9
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 1.4e-93 348.2 703 37.1
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 3.2e-93 347.1 477 48.4
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 4.6e-92 343.2 702 36.8
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.8e-91 341.3 694 37.5
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 8.7e-91 339.0 738 35.2
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.9e-90 337.8 688 37.1
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 3.7e-89 333.6 699 37.1
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.4e-88 331.6 666 37.2
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 9.1e-88 328.9 704 36.2
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 2.6e-87 327.4 684 37.0
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.9e-87 326.2 696 37.4
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 2.9e-86 323.9 690 34.5
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 4.2e-85 320.1 704 36.1
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 4.2e-85 320.1 691 35.5
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.6e-84 318.2 646 38.9
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 3.9e-83 313.5 313 55.0
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.1e-82 312.0 556 39.0
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 2.8e-81 307.4 517 42.2
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 3.7e-81 307.0 685 34.6
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 6.3e-81 306.2 355 54.9
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.4e-80 305.1 650 34.5
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 4.1e-80 303.5 531 40.5
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 3.4e-79 300.4 622 37.9
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.3e-78 298.5 699 34.5
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 1.4e-77 295.0 687 33.8
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 9.4e-77 292.4 689 34.4
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 4.7e-76 290.0 680 34.9
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 8.0e-76 289.3 677 33.7
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.7e-74 283.1 686 34.0
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 1.8e-72 278.1 694 34.3
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 4.5e-71 273.5 754 31.6
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 3.8e-70 270.4 502 39.8
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 5.5e-69 266.5 692 32.2
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.2e-68 265.4 690 33.9
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 2.6e-66 257.7 688 32.6
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 7.5e-66 256.1 707 32.0
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 9.7e-66 255.8 633 33.3
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 8.2e-65 252.7 680 31.6
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 4.5e-63 246.9 680 31.2
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 1.0e-62 245.7 680 31.0
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 1.3e-62 245.4 706 31.6
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.0e-62 243.4 308 47.7
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.9e-61 241.5 712 30.6
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 2.7e-60 237.7 694 31.1
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 2.7e-60 237.7 694 31.1
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 3.6e-60 237.3 319 43.6
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 8.0e-60 236.1 682 31.4
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 2.6e-58 231.1 261 49.8
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 1.8e-56 224.9 358 40.5
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 5.9e-55 219.9 700 31.4
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.3e-54 218.0 479 39.5
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 7.2e-53 213.0 322 41.0
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 1.2e-52 212.2 696 31.0
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 2.8e-52 211.1 422 36.0
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.8e-51 208.4 210 52.9
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 2.3e-51 208.0 405 37.8
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 1.2e-50 205.7 714 29.4
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 3.7e-49 200.7 684 29.7
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 1.4e-48 198.7 206 51.5
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 1.4e-48 198.7 731 27.6
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 2.4e-48 198.0 462 32.7
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 2.3e-46 191.4 389 35.5
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 1.9e-45 188.3 303 41.3
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 6.8e-43 179.9 414 34.5
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 5.8e-42 176.8 725 28.3
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 6.0e-39 166.8 199 49.2
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.9e-37 161.8 395 34.4
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 8.0e-36 156.4 128 62.5
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 4.4e-34 150.6 131 57.3
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.7e-30 138.7 307 37.8
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 6.6e-30 136.7 173 48.6
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 5.2e-27 127.1 205 40.5
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 1.7e-25 122.1 359 30.9
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 5.4e-24 117.1 334 30.2
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 3.0e-22 111.3 718 24.8
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 5.6e-21 107.1 90 56.7
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 3.6e-20 104.4 135 40.0
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 7.6e-18 96.7 245 35.1
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 2.1e-15 88.6 423 26.0
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.1e-11 76.3 220 27.7
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 1.4e-11 75.9 164 37.2
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 1.5e-10 72.4 264 29.9
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 9.3e-08 63.2 78 42.3


User provided reference genes

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