Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 0.0e+00 1314.3 665 100.0
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 8.5e-293 1010.0 665 79.4
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 3.2e-284 981.5 743 69.3
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 5.5e-284 980.7 669 77.0
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 1.6e-254 882.9 635 71.0
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 4.6e-254 881.3 644 70.2
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 1.9e-252 875.9 666 68.2
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 2.8e-251 872.1 663 67.3
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 1.5e-241 839.7 664 66.0
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 4.4e-241 838.2 668 66.2
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 3.8e-240 835.1 664 65.5
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 8.4e-240 833.9 664 65.7
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 3.2e-239 832.0 666 65.2
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 2.1e-238 829.3 664 65.2
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.7e-237 826.2 682 64.2
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.7e-237 826.2 682 64.2
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 3.3e-236 822.0 662 65.4
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 5.6e-236 821.2 671 64.7
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 1.2e-235 820.1 669 64.4
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 8.7e-229 797.3 635 65.7
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 1.3e-227 793.5 765 58.0
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 1.4e-226 790.0 666 61.9
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 3.1e-226 788.9 668 62.1
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 5.8e-225 784.6 689 62.3
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 2.9e-224 782.3 678 61.5
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 3.8e-224 781.9 667 62.1
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 7.1e-223 777.7 667 62.1
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 9.3e-223 777.3 667 60.9
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 6.0e-222 774.6 667 61.9
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 2.3e-221 772.7 666 61.0
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 6.7e-221 771.2 666 60.8
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 1.5e-220 770.0 667 61.6
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 1.9e-220 769.6 667 62.4
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 1.9e-220 769.6 670 60.3
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 4.3e-220 768.5 661 62.3
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 7.4e-220 767.7 668 62.1
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 1.3e-219 766.9 664 61.0
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.6e-219 766.5 668 61.2
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 1.1e-218 763.8 665 59.7
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 3.1e-218 762.3 669 61.1
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 6.9e-218 761.1 665 60.8
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 9.0e-218 760.8 670 60.4
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.5e-217 760.0 669 60.8
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 2.0e-217 759.6 668 60.9
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 8.4e-216 754.2 662 61.5
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.1e-215 753.8 668 60.8
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 2.7e-214 749.2 662 59.8
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 1.3e-213 746.9 669 59.0
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 3.9e-213 745.3 670 59.6
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 1.1e-212 743.8 668 59.6
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.9e-212 743.0 670 58.5
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 9.6e-212 740.7 670 59.0
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 1.8e-210 736.5 666 59.6
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 9.0e-210 734.2 636 61.5
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 2.0e-209 733.0 670 59.9
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 7.6e-209 731.1 655 60.3
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 2.2e-208 729.6 583 65.0
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 8.4e-208 727.6 662 58.5
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 9.3e-207 724.2 661 59.3
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 9.3e-207 724.2 667 56.8
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 2.1e-206 723.0 667 56.5
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 1.3e-205 720.3 660 58.9
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 2.3e-205 719.5 667 57.4
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 5.1e-205 718.4 664 58.7
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 2.8e-203 712.6 664 58.1
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 6.3e-203 711.4 660 58.2
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 3.4e-201 705.7 664 57.8
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 1.3e-200 703.7 664 57.7
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 2.9e-200 702.6 664 56.9
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 8.5e-200 701.0 668 56.0
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 1.4e-199 700.3 669 57.2
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 1.4e-199 700.3 668 56.7
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 7.2e-199 698.0 673 57.2
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 1.2e-198 697.2 669 57.4
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 2.1e-198 696.4 661 57.2
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 4.6e-198 695.3 662 57.4
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 6.1e-198 694.9 662 55.9
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.0e-197 694.1 668 57.2
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 2.3e-197 693.0 666 56.6
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 3.9e-197 692.2 661 56.9
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 8.8e-197 691.0 663 56.9
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 3.3e-196 689.1 666 56.0
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 9.7e-196 687.6 680 55.4
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 1.3e-195 687.2 664 56.0
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 1.1e-194 684.1 661 55.7
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 2.9e-192 676.0 923 44.5
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 1.4e-191 673.7 663 55.5
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 3.2e-191 672.5 664 54.7
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 4.2e-191 672.2 669 54.4
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 7.2e-191 671.4 666 55.3
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 2.0e-188 663.3 660 54.7
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 9.1e-186 654.4 662 53.8
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 4.8e-179 632.1 680 52.1
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 1.7e-176 623.6 669 50.1
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 6.5e-176 621.7 661 51.6
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 5.7e-172 608.6 630 52.4
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 2.0e-169 600.1 678 50.1
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 7.5e-164 581.6 668 48.8
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 5.9e-161 572.0 686 49.7
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 2.0e-156 557.0 665 46.5
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 1.2e-150 537.7 714 44.3
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 2.2e-147 526.9 493 56.6
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 1.6e-142 510.8 555 50.3
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 2.1e-134 483.8 525 51.4
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 9.9e-124 448.4 540 47.0
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 3.3e-95 353.6 303 63.4
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 1.1e-90 338.6 723 33.5
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 1.0e-80 305.4 667 32.5
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 2.0e-79 301.2 535 36.1
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 4.8e-78 296.6 428 44.2
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 4.8e-78 296.6 652 32.2
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.5e-58 231.1 171 70.8
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 2.3e-48 198.0 479 33.0
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 1.3e-46 192.2 144 72.9
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 8.9e-40 169.5 181 49.7
TAR625G1387 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.8e-37 161.8 364 33.5
SHI18657 Sapria himalayana HOM05D005966 ORTHO05D007584 1.5e-34 152.1 141 58.2
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 2.2e-30 138.3 105 68.6
CBR_g48370 Chara braunii HOM05D005966 ORTHO05D000048 1.5e-26 125.6 246 35.0
Aqoxy7G02129 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 4.3e-26 124.0 184 48.9
Hma1.2p1_0090F.1_g045710 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 8.6e-19 99.8 211 33.2
COL.COLO4_05779 Corchorus olitorius HOM05D005966 ORTHO05D007584 1.6e-17 95.5 58 70.7
CAN.G925.3 Capsicum annuum HOM05D005966 ORTHO05D007584 1.8e-16 92.0 87 51.7
GSVIVG01027692001 Vitis vinifera HOM05D005966 ORTHO05D007584 1.5e-15 89.0 57 73.7
Lsat_1_v5_gn_8_82580 Lactuca sativa HOM05D005966 ORTHO05D007584 7.1e-13 80.1 49 71.4
CAN.G1289.8 Capsicum annuum HOM05D005966 ORTHO05D007584 4.6e-12 77.4 58 63.8
CDE11G0857 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 1.6e-09 68.9 76 50.0
TAR626G0958 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.2e-07 62.8 37 86.5
TAR362G1246 Trochodendron aralioides HOM05D005966 ORTHO05D007584 5.8e-07 60.5 37 83.8


User provided reference genes

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