Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07423 Striga asiatica HOM05D001317 ORTHO05D400772 1.4e-102 376.3 193 100.0
SGA_v2.0_scaffold4G02307 Striga asiatica HOM05D001317 ORTHO05D399641 2.7e-13 79.7 76 67.1
SGA_v2.0_scaffold710G53496 Striga asiatica HOM05D001317 ORTHO05D001164 6.8e-09 65.1 51 74.5
Migut.J00976 Erythranthe guttata HOM05D001317 ORTHO05D001164 2.0e-08 63.5 51 72.5
MSTRG.19237 Avicennia marina HOM05D001317 ORTHO05D001164 7.6e-08 61.6 51 68.6
Dinv21243 Davidia involucrata HOM05D001317 ORTHO05D001164 7.6e-08 61.6 50 72.0
Peaxi162Scf00163g00217 Petunia axillaris HOM05D001317 ORTHO05D001164 7.6e-08 61.6 51 68.6
SalBow3G0840 Salvia bowleyana HOM05D001317 ORTHO05D001164 7.6e-08 61.6 50 72.0
TWI53G1386 Tripterygium wilfordii HOM05D001317 ORTHO05D001164 9.9e-08 61.2 54 63.0
COL.COLO4_29798 Corchorus olitorius HOM05D001317 ORTHO05D001164 1.3e-07 60.8 54 64.8
Gohir.A09G137500 Gossypium hirsutum HOM05D001317 ORTHO05D001164 1.3e-07 60.8 54 64.8
Oeu018723.1 Olea europaea HOM05D001317 ORTHO05D001164 1.3e-07 60.8 51 66.7
Oeu052893.1 Olea europaea HOM05D001317 ORTHO05D001164 1.3e-07 60.8 51 64.7
ClCG10G019230 Citrullus lanatus HOM05D001317 ORTHO05D001164 1.7e-07 60.5 58 60.3
Gohir.D09G137100 Gossypium hirsutum HOM05D001317 ORTHO05D001164 1.7e-07 60.5 54 64.8
Hma1.2p1_0646F.1_g194990 Hydrangea macrophylla HOM05D001317 ORTHO05D001164 1.7e-07 60.5 50 70.0
Atru.chr8.1614 Acer truncatum HOM05D001317 ORTHO05D001164 2.2e-07 60.1 50 68.0
MSTRG.5815 Avicennia marina HOM05D001317 ORTHO05D001164 2.2e-07 60.1 51 66.7
FAN05G0604 Fragaria x ananassa HOM05D001317 ORTHO05D001164 2.2e-07 60.1 51 64.7
FAN05G3700 Fragaria x ananassa HOM05D001317 ORTHO05D001164 2.2e-07 60.1 51 64.7
Oeu039816.1 Olea europaea HOM05D001317 ORTHO05D001164 2.2e-07 60.1 51 66.7
Sed0004160 Sechium edule HOM05D001317 ORTHO05D001164 2.2e-07 60.1 54 63.0
SGA_v2.0_scaffold75G24791 Striga asiatica HOM05D001317 ORTHO05D001164 2.2e-07 60.1 50 70.0
CSS0016769 Camellia sinensis var. sinensis HOM05D001317 ORTHO05D001164 2.9e-07 59.7 51 66.7
CiPaw.09G009700 Carya illinoinensis HOM05D001317 ORTHO05D001164 2.9e-07 59.7 51 64.7
MELO3C009443.2 Cucumis melo HOM05D001317 ORTHO05D001164 2.9e-07 59.7 53 64.2
CsaV3_3G036960 Cucumis sativus L. HOM05D001317 ORTHO05D001164 2.9e-07 59.7 53 64.2
FvH4_6g18110 Fragaria vesca HOM05D001317 ORTHO05D001164 2.9e-07 59.7 51 64.7
FAN09G2556 Fragaria x ananassa HOM05D001317 ORTHO05D001164 2.9e-07 59.7 51 64.7
Glyma.19G192600 Glycine max HOM05D001317 ORTHO05D001164 2.9e-07 59.7 54 63.0
Prupe.7G115700 Prunus persica HOM05D001317 ORTHO05D001164 2.9e-07 59.7 51 64.7
Ciclev10012928m.g Citrus clementina HOM05D001317 ORTHO05D001164 3.7e-07 59.3 58 58.6
ECA233G0586 Erigeron canadensis HOM05D001317 ORTHO05D001164 3.7e-07 59.3 51 64.7
Gorai.006G157400 Gossypium raimondii HOM05D001317 ORTHO05D001164 3.7e-07 59.3 54 63.0
Psat3g035200 Pisum sativum HOM05D001317 ORTHO05D001164 3.7e-07 59.3 54 63.0
Potri.006G115400 Populus trichocarpa HOM05D001317 ORTHO05D001164 3.7e-07 59.3 53 62.3
Rhsim04G0134900 Rhododendron simsii HOM05D001317 ORTHO05D001164 3.7e-07 59.3 51 64.7
RhsimUnG0042300 Rhododendron simsii HOM05D001317 ORTHO05D001164 3.7e-07 59.3 51 64.7
TPR.G25372 Trifolium pratense HOM05D001317 ORTHO05D001164 3.7e-07 59.3 54 63.0
arahy.Tifrunner.gnm1.ann1.A4KAB7 Arachis hypogaea HOM05D001317 ORTHO05D001164 4.9e-07 58.9 54 61.1
arahy.Tifrunner.gnm1.ann1.CC2QWC Arachis hypogaea HOM05D001317 ORTHO05D001164 4.9e-07 58.9 54 61.1
Gohir.D01G197400 Gossypium hirsutum HOM05D001317 ORTHO05D001164 4.9e-07 58.9 53 64.2
Gorai.002G241500 Gossypium raimondii HOM05D001317 ORTHO05D001164 4.9e-07 58.9 53 64.2
Lalb_Chr25g0288601 Lupinus albus HOM05D001317 ORTHO05D001164 4.9e-07 58.9 54 61.1
MD14G1017400 Malus domestica HOM05D001317 ORTHO05D001164 4.9e-07 58.9 51 62.7
Thecc.05G083200 Theobroma cacao HOM05D001317 ORTHO05D001164 4.9e-07 58.9 53 64.2
Dinv19840 Davidia involucrata HOM05D001317 ORTHO05D001164 6.4e-07 58.5 50 68.0
Glyma.03G192100 Glycine max HOM05D001317 ORTHO05D001164 6.4e-07 58.5 54 61.1
MD12G1020200 Malus domestica HOM05D001317 ORTHO05D001164 6.4e-07 58.5 54 59.3
Medtr7g104020 Medicago truncatula HOM05D001317 ORTHO05D001164 6.4e-07 58.5 54 63.0
Nitab4.5_0003454g0030 Nicotiana tabacum HOM05D001317 ORTHO05D001164 6.4e-07 58.5 50 66.0
Phvul.001G187400 Phaseolus vulgaris HOM05D001317 ORTHO05D001164 6.4e-07 58.5 54 61.1
Rhsim03G0079200 Rhododendron simsii HOM05D001317 ORTHO05D001164 6.4e-07 58.5 50 68.0
Rhsim03G0079800 Rhododendron simsii HOM05D001317 ORTHO05D001164 6.4e-07 58.5 50 68.0
Sabra06G0090300 Salix brachista HOM05D001317 ORTHO05D001164 6.4e-07 58.5 53 62.3
vmacro07381 Vaccinium macrocarpon HOM05D001317 ORTHO05D001164 6.4e-07 58.5 50 68.0
vmacro08823 Vaccinium macrocarpon HOM05D001317 ORTHO05D001164 6.4e-07 58.5 51 64.7
VMungo1383G3133 Vigna mungo HOM05D001317 ORTHO05D001164 6.4e-07 58.5 54 61.1
Nitab4.5_0000132g0090 Nicotiana tabacum HOM05D001317 ORTHO05D001164 8.4e-07 58.2 50 64.0
Nitab4.5_0000963g0040 Nicotiana tabacum HOM05D001317 ORTHO05D001164 8.4e-07 58.2 50 64.0
Oeu042278.1 Olea europaea HOM05D001317 ORTHO05D001164 8.4e-07 58.2 51 62.7
Sopen09g003940 Solanum pennellii HOM05D001317 ORTHO05D001164 8.4e-07 58.2 50 66.0
PGSC0003DMG400002711 Solanum tuberosum HOM05D001317 ORTHO05D001164 8.4e-07 58.2 50 66.0
Lsat_1_v5_gn_6_70780 Lactuca sativa HOM05D001317 ORTHO05D001164 1.1e-06 57.8 51 62.7
QL07p040067 Quercus lobata HOM05D001317 ORTHO05D001164 1.1e-06 57.8 73 49.3
RcHm_v2.0_Chr3g0472381 Rosa chinensis HOM05D001317 ORTHO05D001164 1.1e-06 57.8 51 60.8
TWI77G0148 Tripterygium wilfordii HOM05D001317 ORTHO05D001164 1.1e-06 57.8 53 60.4
unitig_749.g14290 Utricularia gibba HOM05D001317 ORTHO05D001164 1.1e-06 57.8 51 64.7
Cfa016558 Carpinus fangiana HOM05D001317 ORTHO05D001164 1.4e-06 57.4 58 56.9
Haze_19559 Corylus avellana HOM05D001317 ORTHO05D001164 1.4e-06 57.4 58 56.9
Peaxi162Scf00068g00034 Petunia axillaris HOM05D001317 ORTHO05D001164 1.4e-06 57.4 50 64.0
Actinidia05450 Actinidia chinensis HOM05D001317 ORTHO05D001164 1.9e-06 57.0 53 62.3
Actinidia10396 Actinidia chinensis HOM05D001317 ORTHO05D001164 1.9e-06 57.0 50 64.0
Lalb_Chr20g0112121 Lupinus albus HOM05D001317 ORTHO05D001164 1.9e-06 57.0 82 45.1
Manes.08G022200 Manihot esculenta HOM05D001317 ORTHO05D001164 1.9e-06 57.0 53 58.5
THA.LOC104826930 Tarenaya hassleriana HOM05D001317 ORTHO05D001164 1.9e-06 57.0 53 58.5
unitig_578.g15764 Utricularia gibba HOM05D001317 ORTHO05D001164 1.9e-06 57.0 49 67.3
Gohir.A01G208000 Gossypium hirsutum HOM05D001317 ORTHO05D001164 2.4e-06 56.6 53 62.3
CANSAT80G0207 Cannabis sativa HOM05D001317 ORTHO05D001164 3.2e-06 56.2 51 58.8
Cpa.g.sc5.64 Carica papaya HOM05D001317 ORTHO05D001164 3.2e-06 56.2 66 50.0
CiPaw.10G006400 Carya illinoinensis HOM05D001317 ORTHO05D001164 3.2e-06 56.2 54 59.3
DCAR_013368 Daucus carota HOM05D001317 ORTHO05D001164 3.2e-06 56.2 53 60.4
Duzib093G0422 Durio zibethinus HOM05D001317 ORTHO05D001164 3.2e-06 56.2 53 60.4
BcaB03g11579 Brassica carinata HOM05D001317 ORTHO05D001164 4.1e-06 55.8 53 56.6
BcaC05g26952 Brassica carinata HOM05D001317 ORTHO05D001164 4.1e-06 55.8 53 56.6
HanXRQChr11g0351201 Helianthus annuus HOM05D001317 ORTHO05D001164 4.1e-06 55.8 51 58.8
Lsat_1_v5_gn_1_48540 Lactuca sativa HOM05D001317 ORTHO05D001164 4.1e-06 55.8 51 58.8
THA.LOC104823227 Tarenaya hassleriana HOM05D001317 ORTHO05D001164 4.1e-06 55.8 53 56.6
Duzib106G1466 Durio zibethinus HOM05D001317 ORTHO05D001164 5.4e-06 55.5 53 58.5
Lj3A1002G51 Lonicera japonica HOM05D001317 ORTHO05D001164 5.4e-06 55.5 48 66.7
Solyc10g083520.2 Solanum lycopersicum HOM05D001317 ORTHO05D001164 5.4e-06 55.5 50 60.0
Sopen10g032990 Solanum pennellii HOM05D001317 ORTHO05D001164 5.4e-06 55.5 50 60.0
unitig_26.g9246 Utricularia gibba HOM05D001317 ORTHO05D001164 5.4e-06 55.5 51 60.8
HanXRQChr12g0380951 Helianthus annuus HOM05D001317 ORTHO05D001164 7.1e-06 55.1 51 58.8
Lj1g0019636 Lotus japonicus HOM05D001317 ORTHO05D001164 7.1e-06 55.1 54 55.6
Hund18733 Selenicereus undatus HOM05D001317 ORTHO05D001164 7.1e-06 55.1 50 60.0
Aa31LG3G2480 Aethionema arabicum HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
AL3G21270 Arabidopsis lyrata HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
AT3G09980 Arabidopsis thaliana HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
BcaC01g04255 Brassica carinata HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
BcaC05g29725 Brassica carinata HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
A03p35740 Brassica napus HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
A05p39040 Brassica napus HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
C03p43410 Brassica napus HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
C05p58060 Brassica napus HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
BolC5t34463H Brassica oleracea HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
BraA03t12748Z Brassica rapa HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
BraA05t22696Z Brassica rapa HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
Carub.0003s0908 Capsella rubella HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
CARHR084490 Cardamine hirsuta HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
Thhalv10021627m.g Eutrema salsugineum HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7
Sp3g08320 Schrenkiella parvula HOM05D001317 ORTHO05D001164 9.2e-06 54.7 53 54.7


User provided reference genes

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