Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 0.0e+00 2076.2 1124 100.0
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 0.0e+00 1133.2 1120 59.3
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 0.0e+00 1088.6 1128 57.4
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 0.0e+00 1079.7 1134 56.4
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 6.7e-298 1027.7 1213 51.6
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 5.7e-273 944.9 1151 50.4
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 7.2e-268 927.9 1147 47.1
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 3.0e-266 922.5 1147 47.0
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 1.3e-264 917.1 1150 48.9
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 9.1e-263 911.0 1147 47.0
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 3.8e-253 879.0 1143 46.1
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 3.8e-253 879.0 1143 46.1
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 3.8e-253 879.0 1138 48.0
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 8.5e-253 877.9 1196 46.4
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 4.2e-252 875.5 1138 45.6
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 1.2e-251 874.0 1131 47.5
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 2.1e-251 873.2 1147 48.7
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 2.6e-249 866.3 1121 47.5
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 4.4e-249 865.5 1132 45.5
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 5.7e-249 865.1 1139 45.4
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 6.3e-248 861.7 1138 45.3
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 1.1e-247 860.9 1196 46.2
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.8e-247 860.1 1198 46.2
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 2.4e-247 859.8 1187 45.9
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 5.4e-247 858.6 1183 45.6
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 9.1e-247 857.8 1190 46.1
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 1.6e-246 857.1 1168 47.1
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 2.7e-246 856.3 1145 45.0
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 1.0e-245 854.4 1146 46.2
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 1.0e-245 854.4 1172 43.9
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.3e-245 854.0 1196 46.0
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 3.8e-245 852.4 1134 44.8
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 3.8e-245 852.4 1191 46.5
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 5.0e-245 852.0 1129 44.4
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 8.6e-245 851.3 1157 47.1
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 1.1e-244 850.9 1193 46.0
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 4.2e-244 849.0 1145 45.3
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 5.5e-244 848.6 1138 45.4
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.6e-243 847.0 1141 45.0
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 2.1e-243 846.7 1139 46.1
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 4.7e-243 845.5 1128 46.0
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 1.8e-242 843.6 1133 46.5
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 2.3e-242 843.2 1132 45.3
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 5.2e-242 842.0 1148 47.0
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 4.4e-241 839.0 1212 44.9
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 2.4e-239 833.2 1133 45.7
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 5.4e-239 832.0 1175 44.0
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 4.5e-238 828.9 1193 45.4
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 7.8e-238 828.2 1132 46.2
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 9.5e-236 821.2 1133 43.7
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 2.1e-235 820.1 1125 45.8
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 3.6e-235 819.3 1148 44.0
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.0e-234 817.8 1124 48.1
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 2.3e-234 816.6 1194 42.8
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 4.0e-234 815.8 1134 43.8
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.2e-234 815.5 915 52.6
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 9.8e-233 811.2 1164 43.4
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 2.9e-232 809.7 1146 43.1
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 3.7e-232 809.3 1133 43.8
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 6.4e-232 808.5 1145 44.3
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 1.9e-231 807.0 1152 43.8
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 4.1e-231 805.8 1152 43.8
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 7.0e-231 805.1 1131 44.3
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 1.2e-230 804.3 1166 43.3
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 1.6e-230 803.9 1139 42.9
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 3.5e-230 802.7 1136 45.4
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 2.3e-229 800.0 1147 42.9
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 6.6e-229 798.5 1190 42.4
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 4.3e-228 795.8 1140 42.2
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 9.5e-228 794.7 1125 45.8
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 1.6e-227 793.9 1124 43.7
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 2.1e-227 793.5 1166 43.7
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 2.1e-227 793.5 1136 43.6
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.7e-227 792.3 1166 43.6
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 1.5e-225 787.3 1121 43.7
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 3.4e-225 786.2 1135 46.2
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 2.2e-224 783.5 1194 44.1
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 6.4e-224 781.9 1171 42.5
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 6.4e-224 781.9 1134 44.8
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 1.4e-223 780.8 540 68.9
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.7e-221 773.9 1138 44.6
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.3e-221 773.5 1171 43.4
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 2.3e-221 773.5 1127 44.2
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.1e-220 771.2 1171 42.8
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 1.5e-220 770.8 1134 42.0
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 1.2e-219 767.7 1144 42.3
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 1.4e-218 764.2 1070 47.1
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.5e-217 760.8 662 61.6
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.1e-215 754.6 1128 44.2
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 3.2e-215 753.1 632 64.1
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 1.2e-214 751.1 1145 42.5
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 4.6e-214 749.2 1114 42.6
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 6.6e-213 745.3 545 66.1
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 1.1e-212 744.6 1136 43.9
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 1.9e-212 743.8 538 66.2
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 9.0e-202 708.4 977 44.2
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 7.1e-199 698.7 1138 43.1
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 6.0e-198 695.7 1053 45.0
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 1.6e-190 671.0 1004 44.5
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 3.5e-190 669.8 1132 40.1
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.6e-171 607.8 1120 35.8
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.4e-167 594.7 483 60.0
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 5.0e-152 543.1 1004 38.8
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 1.9e-151 541.2 1110 37.1
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 7.0e-138 496.1 932 40.1
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.1e-135 488.8 664 47.6
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 3.6e-126 457.2 1112 34.4
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 1.1e-122 445.7 869 39.5
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 5.1e-104 383.6 535 54.2
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 8.1e-102 376.3 953 32.6
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 2.6e-100 371.3 785 37.5
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 1.7e-99 368.6 253 66.8
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 4.6e-89 334.0 538 36.4
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 7.3e-87 326.6 505 46.1
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 1.1e-79 302.8 202 68.8
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 7.3e-79 300.1 961 30.4
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 2.8e-78 298.1 205 69.3
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 1.4e-74 285.8 351 50.7
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 4.6e-65 254.2 531 32.8
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.2e-59 235.3 356 43.3
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 2.9e-51 208.4 300 45.3
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 1.0e-48 199.9 266 44.7
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 4.5e-44 184.5 198 53.0
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 9.4e-42 176.8 99 79.8
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 1.1e-37 163.3 136 52.9
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 5.3e-37 161.0 161 52.2
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 9.1e-37 160.2 161 52.2
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.9e-34 152.5 93 80.6
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 3.2e-34 151.8 123 65.9
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 2.3e-32 145.6 93 74.2
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.2e-32 144.4 112 66.1
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 7.7e-28 130.6 181 42.0
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.9e-26 125.9 93 65.6
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 5.2e-24 117.9 76 73.7
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 9.8e-23 113.6 142 46.5
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.8e-22 112.1 74 62.2
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 6.3e-22 110.9 193 42.5
CSS0044835 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D017532 5.4e-21 107.8 77 63.6
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 7.0e-21 107.5 105 55.2
CAN.G1823.3 Capsicum annuum HOM05D004966 ORTHO05D017532 2.0e-20 105.9 68 69.1
CSS0002033 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 6.5e-19 100.9 77 59.7
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 5.2e-16 91.3 321 27.4
BcaC09g50643 Brassica carinata HOM05D003801 ORTHO05D017532 3.7e-14 85.1 63 58.7
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 5.4e-13 81.3 120 40.8
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.5e-10 72.4 45 75.6
Psat1g079920 Pisum sativum HOM05D000315 ORTHO05D000527 5.2e-08 64.7 46 63.0
COL.COLO4_27263 Corchorus olitorius HOM05D010859 ORTHO05D010098 2.6e-07 62.4 172 30.2
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.7e-07 61.2 40 70.0
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 9.8e-07 60.5 47 48.9
CSS0019148 Camellia sinensis var. sinensis HOM05D001960 ORTHO05D004348 1.7e-06 59.7 84 42.9
ATR0030G038 Amborella trichopoda HOM05D047453 ORTHO05D006199 4.9e-06 58.2 214 30.4


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