Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold159G37712 Striga asiatica HOM05D000538 ORTHO05D000614 8.8e-162 573.5 286 100.0
SGA_v2.0_scaffold49G18271 Striga asiatica HOM05D000538 ORTHO05D000614 1.8e-21 107.5 255 30.6
unitig_8.g3763 Utricularia gibba HOM05D000538 ORTHO05D000614 3.8e-16 89.7 255 24.7
MSTRG.13164 Avicennia marina HOM05D000538 ORTHO05D000614 3.2e-15 86.7 218 26.6
Oeu058171.1 Olea europaea HOM05D000538 ORTHO05D000614 3.2e-15 86.7 213 28.6
Oeu063070.2 Olea europaea HOM05D000538 ORTHO05D000614 3.2e-15 86.7 228 29.4
MSTRG.14651 Avicennia marina HOM05D000538 ORTHO05D000614 5.5e-15 85.9 221 28.5
SalBow5G1539 Salvia bowleyana HOM05D000538 ORTHO05D000614 9.5e-15 85.1 210 29.0
MSTRG.9015 Avicennia marina HOM05D000538 ORTHO05D000614 6.8e-13 79.0 230 28.7
Oeu051232.1 Olea europaea HOM05D000538 ORTHO05D000614 1.2e-12 78.2 251 24.3
FAN21G0633 Fragaria x ananassa HOM05D000538 ORTHO05D000614 3.4e-12 76.6 226 26.5
FAN21G1131 Fragaria x ananassa HOM05D000538 ORTHO05D000614 3.4e-12 76.6 226 26.5
FAN25G1625 Fragaria x ananassa HOM05D000538 ORTHO05D000614 4.4e-12 76.3 226 26.5
MD05G1335900 Malus domestica HOM05D000538 ORTHO05D000614 1.7e-11 74.3 224 26.8
SalBow6G5108 Salvia bowleyana HOM05D000538 ORTHO05D000614 1.7e-11 74.3 224 25.4
FvH4_3g02930 Fragaria vesca HOM05D000538 ORTHO05D000614 3.7e-11 73.2 227 26.0
unitig_0.g2465 Utricularia gibba HOM05D000538 ORTHO05D000614 3.7e-11 73.2 246 22.4
RcHm_v2.0_Chr5g0004541 Rosa chinensis HOM05D000538 ORTHO05D000614 6.3e-11 72.4 233 25.8
unitig_46.g18731 Utricularia gibba HOM05D000538 ORTHO05D000614 6.3e-11 72.4 188 27.7
SalBow6G4402 Salvia bowleyana HOM05D000538 ORTHO05D000614 1.8e-10 70.9 261 24.9
Rhsim13G0162300 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.4e-10 70.5 213 27.7
Duzib213G0266 Durio zibethinus HOM05D000538 ORTHO05D000614 4.1e-10 69.7 212 25.0
Oeu058169.1 Olea europaea HOM05D000538 ORTHO05D000614 4.1e-10 69.7 199 27.1
Prupe.3G046700 Prunus persica HOM05D002395 ORTHO05D000614 7.0e-10 68.9 221 27.6
Dinv18944 Davidia involucrata HOM05D000538 ORTHO05D000614 9.2e-10 68.6 221 25.8
ECA236G5057 Erigeron canadensis HOM05D000538 ORTHO05D000614 9.2e-10 68.6 219 24.2
Sed0014375 Sechium edule HOM05D000538 ORTHO05D000614 1.2e-09 68.2 232 27.2
Actinidia12491 Actinidia chinensis HOM05D000538 ORTHO05D000614 1.6e-09 67.8 236 25.0
Duzib268G1429 Durio zibethinus HOM05D000538 ORTHO05D000614 2.7e-09 67.0 212 24.1
Duzib213G0460 Durio zibethinus HOM05D000538 ORTHO05D000614 4.5e-09 66.2 215 23.7
CANSAT54G1163 Cannabis sativa HOM05D000538 ORTHO05D000614 7.8e-09 65.5 217 24.9
CsaV3_6G049420 Cucumis sativus L. HOM05D000538 ORTHO05D000614 1.0e-08 65.1 235 26.8
DCAR_024903 Daucus carota HOM05D000538 ORTHO05D000614 1.3e-08 64.7 96 34.4
Migut.M01263 Erythranthe guttata HOM05D000538 ORTHO05D000614 1.3e-08 64.7 220 24.5
Manes.16G016900 Manihot esculenta HOM05D000538 ORTHO05D000614 1.3e-08 64.7 221 25.3
Thecc.07G148000 Theobroma cacao HOM05D000538 ORTHO05D000614 1.3e-08 64.7 212 26.4
AT1G11510 Arabidopsis thaliana HOM05D000538 ORTHO05D000614 2.3e-08 63.9 158 27.8
Nn1g03728 Nelumbo nucifera HOM05D000538 ORTHO05D000614 2.3e-08 63.9 219 25.1
HanXRQChr03g0087661 Helianthus annuus HOM05D000538 ORTHO05D000614 2.9e-08 63.5 238 23.1
Manes.07G017600 Manihot esculenta HOM05D000538 ORTHO05D000614 2.9e-08 63.5 222 26.1
Rhsim11G0026100 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.9e-08 63.5 90 37.8
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 3.8e-08 63.2 231 23.8
Nitab4.5_0000786g0080 Nicotiana tabacum HOM05D000538 ORTHO05D000614 3.8e-08 63.2 144 28.5
TWI38G1831 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 3.8e-08 63.2 223 22.9
Prupe.4G029400 Prunus persica HOM05D000538 ORTHO05D000614 5.0e-08 62.8 208 26.4
Rhsim11G0026600 Rhododendron simsii HOM05D000538 ORTHO05D000614 6.6e-08 62.4 89 38.2
Lsat_1_v5_gn_1_81901 Lactuca sativa HOM05D000538 ORTHO05D000614 8.6e-08 62.0 222 27.0
TAR627G0243 Trochodendron aralioides HOM05D000538 ORTHO05D000614 8.6e-08 62.0 213 21.1
Lj2C275T5 Lonicera japonica HOM05D000538 ORTHO05D000614 1.1e-07 61.6 232 22.4
CAN.G857.7 Capsicum annuum HOM05D000538 ORTHO05D000614 1.5e-07 61.2 221 23.5
DCAR_009695 Daucus carota HOM05D000538 ORTHO05D000614 1.5e-07 61.2 283 22.6
Ciclev10015528m.g Citrus clementina HOM05D000538 ORTHO05D000614 3.3e-07 60.1 229 25.3
ECA248G3523 Erigeron canadensis HOM05D000538 ORTHO05D000614 3.3e-07 60.1 254 25.6
TWI39G0036 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 3.3e-07 60.1 211 26.5
Rhsim11G0047000 Rhododendron simsii HOM05D000538 ORTHO05D000614 4.3e-07 59.7 183 28.4
COL.COLO4_17402 Corchorus olitorius HOM05D000538 ORTHO05D000614 5.6e-07 59.3 264 22.7
Atru.chr1.3753 Acer truncatum HOM05D000538 ORTHO05D000614 7.3e-07 58.9 228 24.6
CSS0046322 Camellia sinensis var. sinensis HOM05D000538 ORTHO05D000614 7.3e-07 58.9 89 34.8
Lalb_Chr20g0122641 Lupinus albus HOM05D000538 ORTHO05D000614 7.3e-07 58.9 220 23.6
MSTRG.8993 Avicennia marina HOM05D019614 ORTHO05D015436 9.5e-07 58.5 235 28.5
MELO3C027126.2 Cucumis melo HOM05D000538 ORTHO05D000614 9.5e-07 58.5 95 33.7
Nitab4.5_0008264g0010 Nicotiana tabacum HOM05D000538 ORTHO05D000614 9.5e-07 58.5 144 24.3
Medtr2g010790 Medicago truncatula HOM05D000538 ORTHO05D000614 1.2e-06 58.2 222 26.1
Nn1g03725 Nelumbo nucifera HOM05D000538 ORTHO05D000614 1.2e-06 58.2 138 29.7
GSVIVG01002745001 Vitis vinifera HOM05D000538 ORTHO05D000614 1.2e-06 58.2 150 28.7
HanXRQChr01g0019011 Helianthus annuus HOM05D000538 ORTHO05D000614 1.6e-06 57.8 216 26.4
Prupe.7G003400 Prunus persica HOM05D000538 ORTHO05D000614 1.6e-06 57.8 90 34.4
Migut.H01546 Erythranthe guttata HOM05D000538 ORTHO05D000614 2.1e-06 57.4 254 22.4
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 2.1e-06 57.4 240 23.8
Rhsim11G0026400 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.1e-06 57.4 102 32.4
TAR629G2738 Trochodendron aralioides HOM05D000538 ORTHO05D000614 2.1e-06 57.4 228 23.7
HanXRQChr05g0130791 Helianthus annuus HOM05D000538 ORTHO05D000614 2.8e-06 57.0 238 23.1
Peaxi162Scf00030g00224 Petunia axillaris HOM05D000538 ORTHO05D000614 2.8e-06 57.0 96 32.3
TWI38G2228 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 2.8e-06 57.0 96 29.2
DCAR_031683 Daucus carota HOM05D000538 ORTHO05D000614 3.6e-06 56.6 108 31.5
PGSC0003DMG400030831 Solanum tuberosum HOM05D000538 ORTHO05D000614 3.6e-06 56.6 95 30.5
CDE05G1513 Ceratophyllum demersum HOM05D000538 ORTHO05D000614 4.7e-06 56.2 221 24.4
ClCG01G022290 Citrullus lanatus HOM05D000538 ORTHO05D000614 4.7e-06 56.2 233 25.3
Dinv15618 Davidia involucrata HOM05D000538 ORTHO05D000614 4.7e-06 56.2 199 25.1
BcaC02g09542 Brassica carinata HOM05D009696 ORTHO05D014095 6.1e-06 55.8 92 34.8
Sopen04g029590 Solanum pennellii HOM05D000538 ORTHO05D000614 6.1e-06 55.8 95 30.5
FvH4_6g43700 Fragaria vesca HOM05D000538 ORTHO05D000614 8.0e-06 55.5 150 27.3
FAN14G0602 Fragaria x ananassa HOM05D000538 ORTHO05D000614 8.0e-06 55.5 150 27.3
Lsat_1_v5_gn_7_18320 Lactuca sativa HOM05D000538 ORTHO05D000614 8.0e-06 55.5 223 20.6
Nn4g26474 Nelumbo nucifera HOM05D000538 ORTHO05D000614 8.0e-06 55.5 319 23.8
TWI38G2394 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 8.0e-06 55.5 273 24.9


User provided reference genes

Program Settings