Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold159G37602 Striga asiatica HOM05D007657 ORTHO05D009471 5.4e-139 497.7 255 100.0
SGA_v2.0_scaffold159G37600 Striga asiatica HOM05D007657 ORTHO05D009471 1.3e-60 237.3 262 58.8
SalBow1G6397 Salvia bowleyana HOM05D007657 ORTHO05D009471 1.4e-33 147.5 231 46.3
unitig_62.g23194 Utricularia gibba HOM05D007657 ORTHO05D009471 1.7e-31 140.6 259 40.9
CAN.G86.24 Capsicum annuum HOM05D007657 ORTHO05D009471 2.2e-31 140.2 150 55.3
VMungo1080G1905 Vigna mungo HOM05D007657 ORTHO05D009471 5.4e-30 135.6 238 42.9
Dinv18547 Davidia involucrata HOM05D007657 ORTHO05D009471 1.6e-29 134.0 230 43.5
Nitab4.5_0003429g0020 Nicotiana tabacum HOM05D007657 ORTHO05D009471 2.1e-29 133.7 136 55.1
Phvul.005G112100 Phaseolus vulgaris HOM05D007657 ORTHO05D009471 2.1e-29 133.7 230 41.7
Oeu034340.1 Olea europaea HOM05D007657 ORTHO05D009471 3.5e-29 132.9 238 42.0
Peaxi162Scf00007g01411 Petunia axillaris HOM05D007657 ORTHO05D009471 2.3e-28 130.2 148 50.7
Cc05_g05320 Coffea canephora HOM05D007657 ORTHO05D009471 3.9e-28 129.4 141 48.2
Hma1.2p1_2477F.1_g322870 Hydrangea macrophylla HOM05D007657 ORTHO05D009471 6.6e-28 128.6 159 47.2
CiPaw.03G164200 Carya illinoinensis HOM05D007657 ORTHO05D009471 8.7e-28 128.3 212 40.6
PGSC0003DMG400026164 Solanum tuberosum HOM05D007657 ORTHO05D009471 5.6e-27 125.6 173 45.7
Thecc.02G164200 Theobroma cacao HOM05D007657 ORTHO05D009471 1.6e-26 124.0 170 47.1
MBI18_g21102_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 2.1e-26 123.6 139 50.4
Sopen07g026480 Solanum pennellii HOM05D007657 ORTHO05D009471 6.2e-26 122.1 173 43.9
MBI18_g45174_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 8.1e-26 121.7 176 44.9
Solyc07g052930.3 Solanum lycopersicum HOM05D007657 ORTHO05D009471 1.4e-25 120.9 207 42.0
Lsat_1_v5_gn_3_43060 Lactuca sativa HOM05D007657 ORTHO05D009471 3.1e-25 119.8 158 47.5
Gohir.A03G163000 Gossypium hirsutum HOM05D007657 ORTHO05D009471 1.2e-24 117.9 170 44.7
Lj3g0008282 Lotus japonicus HOM05D007657 ORTHO05D009471 1.2e-24 117.9 179 44.7
MELO3C018792.2 Cucumis melo HOM05D007657 ORTHO05D009471 1.5e-24 117.5 139 49.6
Cpa.g.sc8.253 Carica papaya HOM05D007657 ORTHO05D009471 3.4e-24 116.3 144 49.3
CsaV3_7G003870 Cucumis sativus L. HOM05D007657 ORTHO05D009471 3.4e-24 116.3 157 45.9
Gohir.D02G186500 Gossypium hirsutum HOM05D007657 ORTHO05D009471 3.4e-24 116.3 170 44.1
Gorai.005G208700 Gossypium raimondii HOM05D007657 ORTHO05D009471 5.8e-24 115.5 141 47.5
TWI18G0648 Tripterygium wilfordii HOM05D007657 ORTHO05D009471 5.8e-24 115.5 136 47.1
Glyma.12G196900 Glycine max HOM05D007657 ORTHO05D009471 7.6e-24 115.2 179 44.7
MBI18_g21101_MAGBIO Magnolia biondii HOM05D007657 ORTHO05D009471 1.3e-23 114.4 176 44.3
Ca_01565_v3 Cicer arietinum L. HOM05D007657 ORTHO05D009471 1.7e-23 114.0 190 41.6
ClCG02G001620 Citrullus lanatus HOM05D007657 ORTHO05D009471 1.7e-23 114.0 163 44.8
TPR.G30798 Trifolium pratense HOM05D007657 ORTHO05D009471 1.7e-23 114.0 143 47.6
Atru.chr6.3119 Acer truncatum HOM05D007657 ORTHO05D009471 2.2e-23 113.6 157 45.2
Psat0s3329g0040 Pisum sativum HOM05D007657 ORTHO05D009471 2.2e-23 113.6 197 43.1
COL.COLO4_13025 Corchorus olitorius HOM05D007657 ORTHO05D009471 3.8e-23 112.8 126 50.0
Medtr2g089070 Medicago truncatula HOM05D007657 ORTHO05D009471 8.4e-23 111.7 179 41.9
Sed0004603 Sechium edule HOM05D007657 ORTHO05D009471 1.1e-22 111.3 219 40.6
Duzib052G0340 Durio zibethinus HOM05D007657 ORTHO05D009471 5.4e-22 109.0 192 41.1
Rhsim04G0057500 Rhododendron simsii HOM05D007657 ORTHO05D009471 9.3e-22 108.2 228 41.7
Nn1g03743 Nelumbo nucifera HOM05D020747 ORTHO05D009471 1.2e-21 107.8 165 43.0
QL08p034229 Quercus lobata HOM05D007657 ORTHO05D009471 1.6e-21 107.5 127 47.2
Duzib248G0741 Durio zibethinus HOM05D007657 ORTHO05D009471 2.1e-21 107.1 171 45.0
arahy.Tifrunner.gnm1.ann1.X70W6B Arachis hypogaea HOM05D007657 ORTHO05D009471 3.5e-21 106.3 224 37.1
Prupe.3G222500 Prunus persica HOM05D007657 ORTHO05D009471 4.6e-21 105.9 114 53.5
Nitab4.5_0001134g0150 Nicotiana tabacum HOM05D007657 ORTHO05D009471 6.0e-21 105.5 116 54.3
FAN09G3022 Fragaria x ananassa HOM05D007657 ORTHO05D009471 1.0e-20 104.8 137 46.0
FAN02G3547 Fragaria x ananassa HOM05D007657 ORTHO05D009471 1.3e-20 104.4 266 35.0
Lalb_Chr14g0375601 Lupinus albus HOM05D007657 ORTHO05D009471 2.3e-20 103.6 114 50.0
HanXRQChr15g0479591 Helianthus annuus HOM05D007657 ORTHO05D009471 3.9e-20 102.8 181 40.9
SGA_v2.0_scaffold4400G54479 Striga asiatica HOM05D007657 ORTHO05D009471 3.9e-20 102.8 208 41.8
MD17G1091100 Malus domestica HOM05D007657 ORTHO05D009471 5.1e-20 102.4 124 49.2
FAN05G3329 Fragaria x ananassa HOM05D007657 ORTHO05D009471 6.7e-20 102.1 150 44.0
Cfa014460 Carpinus fangiana HOM05D007657 ORTHO05D009471 8.7e-20 101.7 126 46.8
THA.LOC104802534 Tarenaya hassleriana HOM05D007657 ORTHO05D009471 1.9e-19 100.5 110 47.3
Aqoxy7G03995 Aquilegia oxysepala HOM05D007657 ORTHO05D009471 3.3e-19 99.8 129 43.4
Migut.H01205 Erythranthe guttata HOM05D007657 ORTHO05D009471 4.3e-19 99.4 88 60.2
FvH4_6g43750 Fragaria vesca HOM05D007657 ORTHO05D009471 7.4e-19 98.6 253 34.0
FAN14G5828 Fragaria x ananassa HOM05D007657 ORTHO05D009471 7.4e-19 98.6 253 34.0
Aa31LG8G8650 Aethionema arabicum HOM05D007657 ORTHO05D009471 6.2e-18 95.5 150 40.7
CANSAT64G1489 Cannabis sativa HOM05D007657 ORTHO05D009471 8.1e-18 95.1 125 44.8
Actinidia30501 Actinidia chinensis HOM05D007657 ORTHO05D009471 1.8e-17 94.0 109 50.5
RcHm_v2.0_Chr2g0160481 Rosa chinensis HOM05D007657 ORTHO05D009471 1.8e-17 94.0 195 36.9
ATR0804G080 Amborella trichopoda HOM05D007657 ORTHO05D009471 2.4e-17 93.6 108 48.1
Thhalv10021235m.g Eutrema salsugineum HOM05D007657 ORTHO05D009471 3.1e-17 93.2 181 36.5
Sp3g19920 Schrenkiella parvula HOM05D007657 ORTHO05D009471 9.0e-17 91.7 115 40.9
CDE05G1372 Ceratophyllum demersum HOM05D007657 ORTHO05D009471 2.0e-16 90.5 117 43.6
BcaB04g20544 Brassica carinata HOM05D007657 ORTHO05D009471 4.5e-16 89.4 132 40.2
SGA_v2.0_scaffold61G21269 Striga asiatica HOM05D007657 ORTHO05D009471 1.0e-15 88.2 78 64.1
BcaC05g28104 Brassica carinata HOM05D007657 ORTHO05D009471 1.7e-15 87.4 114 39.5
C05p41310 Brassica napus HOM05D007657 ORTHO05D009471 1.7e-15 87.4 114 39.5
BolC5t32872H Brassica oleracea HOM05D007657 ORTHO05D009471 1.7e-15 87.4 114 39.5
HPP92_000868 Vanilla planifolia HOM05D007657 ORTHO05D009471 2.2e-15 87.0 255 34.9
BcaB06g26306 Brassica carinata HOM05D007657 ORTHO05D009471 3.8e-15 86.3 164 36.0
Psat7g073040 Pisum sativum HOM05D007657 ORTHO05D009471 4.9e-15 85.9 84 52.4
Sc12g0002470 Simmondsia chinensis HOM05D007657 ORTHO05D009471 4.9e-15 85.9 180 38.3
A05p26740 Brassica napus HOM05D007657 ORTHO05D009471 1.1e-14 84.7 159 36.5
Carub.0003s2227 Capsella rubella HOM05D007657 ORTHO05D009471 1.9e-14 84.0 109 41.3
Nn012s41456 Nelumbo nucifera HOM05D020747 ORTHO05D009471 1.9e-14 84.0 126 42.9
BraA05t21556Z Brassica rapa HOM05D007657 ORTHO05D009471 3.2e-14 83.2 159 35.8
Nn1g02822 Nelumbo nucifera HOM05D020747 ORTHO05D009471 4.2e-14 82.8 120 42.5
AT3G22100 Arabidopsis thaliana HOM05D007657 ORTHO05D009471 7.1e-14 82.0 155 36.1
AL3G36280 Arabidopsis lyrata HOM05D007657 ORTHO05D009471 6.0e-13 79.0 189 32.3
Psat7g073080 Pisum sativum HOM05D007657 ORTHO05D009471 3.0e-12 76.6 91 45.1
Cfa019641 Carpinus fangiana HOM05D007657 ORTHO05D009471 4.3e-11 72.8 111 37.8
FvH4_1g29760 Fragaria vesca HOM05D007657 ORTHO05D009471 2.1e-10 70.5 47 70.2
Cfa021139 Carpinus fangiana HOM05D007657 ORTHO05D009471 2.8e-10 70.1 111 36.9
ATR0772G185 Amborella trichopoda HOM05D007657 ORTHO05D009471 3.7e-10 69.7 81 48.1
FAN19G0836 Fragaria x ananassa HOM05D007657 ORTHO05D009471 6.3e-10 68.9 47 68.1
Actinidia39290 Actinidia chinensis HOM05D007657 ORTHO05D009471 4.5e-08 62.8 100 38.0
Zm00001eb159960 Zea mays HOM05D000850 ORTHO05D000266 1.4e-06 57.8 74 40.5
SEGI_09905 Sequoiadendron giganteum HOM05D000850 ORTHO05D014998 4.2e-06 56.2 153 29.4


User provided reference genes

Program Settings