Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 1.3e-221 772.7 377 100.0
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 3.3e-193 678.3 420 82.4
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 2.8e-168 595.5 371 80.6
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 4.8e-168 594.7 375 80.0
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 2.2e-165 585.9 373 78.8
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 4.2e-164 581.6 373 79.1
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.4e-162 576.6 373 77.5
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.4e-162 576.6 373 77.7
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 6.8e-162 574.3 373 78.3
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 6.8e-162 574.3 373 77.2
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.3e-160 570.1 373 76.9
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.2e-160 569.3 373 77.2
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 8.3e-160 567.4 373 76.4
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 1.1e-159 567.0 378 76.5
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 1.4e-159 566.6 373 77.2
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 5.9e-158 561.2 373 76.4
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 5.9e-158 561.2 373 75.6
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 5.9e-158 561.2 375 75.5
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 1.0e-157 560.5 373 76.1
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.0e-157 560.5 373 75.9
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 1.0e-157 560.5 373 76.4
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.7e-157 559.7 374 76.2
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.7e-157 559.7 373 76.9
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 2.3e-157 559.3 373 76.4
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 8.6e-157 557.4 375 76.0
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 1.9e-156 556.2 373 76.4
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.9e-156 556.2 373 76.4
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.9e-156 556.2 373 76.7
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 2.5e-156 555.8 373 76.7
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 4.3e-156 555.1 373 75.9
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 5.6e-156 554.7 373 74.5
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 5.6e-156 554.7 375 75.7
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 9.5e-156 553.9 373 76.1
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.2e-155 553.5 373 76.4
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 1.2e-155 553.5 373 75.3
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 1.6e-155 553.1 375 73.6
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 2.1e-155 552.7 374 74.1
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.8e-155 552.4 373 76.1
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 4.7e-155 551.6 373 75.3
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 2.3e-154 549.3 373 75.9
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 3.0e-154 548.9 373 75.1
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 8.9e-154 547.4 390 72.1
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.0e-153 546.2 373 73.7
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 2.6e-153 545.8 373 74.8
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 3.4e-153 545.4 373 74.8
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 3.4e-153 545.4 373 74.5
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 3.4e-153 545.4 374 74.6
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 4.4e-153 545.0 373 75.9
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 9.8e-153 543.9 374 74.3
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 9.8e-153 543.9 373 73.5
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 1.3e-152 543.5 371 75.2
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.3e-152 543.5 374 74.6
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.3e-152 543.5 373 74.5
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.7e-152 543.1 373 74.3
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 2.2e-152 542.7 375 74.7
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 2.2e-152 542.7 373 74.3
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 2.9e-152 542.3 373 74.0
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 3.7e-152 542.0 373 73.2
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 3.7e-152 542.0 373 74.3
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 4.9e-152 541.6 374 73.8
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 1.1e-151 540.4 373 73.7
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 1.1e-151 540.4 373 72.7
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 1.1e-151 540.4 373 73.7
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.4e-151 540.0 373 73.2
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 1.4e-151 540.0 373 71.3
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.4e-151 540.0 373 72.7
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.8e-151 539.7 373 74.0
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 3.2e-151 538.9 374 74.1
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 4.1e-151 538.5 374 73.0
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 4.1e-151 538.5 373 72.7
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 4.1e-151 538.5 373 72.7
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 7.0e-151 537.7 373 74.0
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 7.0e-151 537.7 373 74.3
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 7.0e-151 537.7 373 74.3
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 7.0e-151 537.7 373 72.9
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 7.0e-151 537.7 374 72.5
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 9.2e-151 537.3 373 74.3
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 9.2e-151 537.3 373 72.7
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.2e-150 537.0 364 74.7
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.2e-150 537.0 374 73.8
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 1.2e-150 537.0 373 70.0
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 1.2e-150 537.0 373 71.8
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 2.7e-150 535.8 373 70.0
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 3.5e-150 535.4 373 74.0
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 5.9e-150 534.6 373 73.5
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 5.9e-150 534.6 364 74.2
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 3.0e-149 532.3 373 71.6
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 3.0e-149 532.3 373 71.6
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 6.6e-149 531.2 373 72.7
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 8.6e-149 530.8 373 72.7
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 8.6e-149 530.8 374 73.3
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 1.1e-148 530.4 373 72.7
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.1e-148 530.4 373 73.7
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 2.5e-148 529.3 373 72.4
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 2.5e-148 529.3 373 72.4
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 3.3e-148 528.9 373 72.4
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 3.3e-148 528.9 373 71.8
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 4.3e-148 528.5 369 72.4
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 4.3e-148 528.5 373 72.4
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 1.6e-147 526.6 373 71.8
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 3.6e-147 525.4 373 71.8
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 3.6e-147 525.4 369 72.6
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 4.7e-147 525.0 373 71.3
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 8.0e-147 524.2 369 71.3
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.0e-146 523.9 412 67.2
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 1.8e-146 523.1 373 71.6
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 2.3e-146 522.7 363 72.2
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 1.5e-145 520.0 374 69.8
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 2.0e-145 519.6 370 73.0
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 2.6e-145 519.2 363 72.5
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 3.4e-145 518.8 363 71.6
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 3.4e-145 518.8 363 71.6
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 3.4e-145 518.8 363 71.6
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 3.4e-145 518.8 363 71.6
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 3.4e-145 518.8 363 71.6
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 5.8e-145 518.1 373 71.0
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 1.7e-144 516.5 369 72.6
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 2.9e-144 515.8 369 71.5
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 8.3e-144 514.2 373 70.0
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.4e-143 512.7 373 72.4
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 5.4e-143 511.5 373 70.8
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 9.2e-143 510.8 373 69.4
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 2.0e-142 509.6 373 69.4
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 4.6e-142 508.4 378 71.2
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 1.0e-141 507.3 287 86.8
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.3e-141 506.9 373 68.1
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 3.9e-141 505.4 373 69.4
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 3.9e-141 505.4 373 70.8
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.5e-140 503.4 373 68.6
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.8e-139 499.2 373 68.9
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 2.0e-137 493.0 371 67.7
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 3.4e-137 492.3 366 69.1
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 3.4e-137 492.3 370 68.4
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 3.7e-136 488.8 372 68.3
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 7.1e-135 484.6 370 66.2
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 3.3e-132 475.7 363 67.8
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 4.0e-130 468.8 368 65.2
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 1.2e-129 467.2 375 62.4
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 2.6e-129 466.1 373 61.4
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 4.4e-129 465.3 373 62.2
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 3.7e-128 462.2 375 60.8
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 1.4e-127 460.3 279 80.6
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 3.2e-127 459.1 369 62.1
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 1.2e-126 457.2 393 63.1
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 1.6e-126 456.8 373 60.6
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 2.1e-126 456.4 374 59.6
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 1.3e-125 453.8 292 77.7
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 5.2e-122 441.8 279 78.9
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 6.8e-122 441.4 377 59.2
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.6e-121 439.5 281 77.6
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 4.3e-116 422.2 287 74.9
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 7.3e-116 421.4 304 70.7
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 3.6e-115 419.1 363 60.1
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 6.9e-114 414.8 381 59.8
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 4.4e-113 412.1 370 55.1
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.3e-112 410.6 350 63.1
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 3.2e-111 406.0 277 72.2
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 7.1e-111 404.8 289 68.9
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 7.1e-111 404.8 332 64.2
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 3.5e-110 402.5 262 77.9
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 2.4e-106 389.8 280 70.4
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 3.5e-102 375.9 383 51.4
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 3.5e-102 375.9 375 50.7
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 5.8e-97 358.6 403 48.4
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 4.9e-96 355.5 374 48.7
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 3.5e-94 349.4 275 65.8
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 4.5e-89 332.4 201 77.6
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 8.2e-83 311.6 197 80.2
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 1.0e-77 294.7 262 62.6
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.7e-70 270.0 226 63.7
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 1.9e-63 247.3 183 70.5
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 2.7e-62 243.4 170 73.5
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 2.4e-50 203.8 231 52.4
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 1.2e-41 174.9 120 69.2
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 1.6e-41 174.5 157 59.9
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 2.9e-40 170.2 120 67.5
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 1.5e-36 157.9 134 62.7
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 2.2e-35 154.1 377 28.4
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 7.0e-34 149.1 115 61.7
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 8.6e-32 142.1 445 26.7
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 6.2e-30 136.0 397 23.9
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 2.6e-28 130.6 295 29.5
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 1.2e-22 111.7 83 66.3
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 3.0e-08 63.9 48 66.7
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 6.2e-06 56.2 68 50.0


User provided reference genes

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