Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 1.3e-254 882.5 435 100.0
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 1.3e-193 679.9 420 82.4
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 4.4e-181 638.3 435 74.9
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 1.3e-180 636.7 431 75.2
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 9.2e-179 630.6 433 74.4
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 2.1e-175 619.4 433 73.7
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 2.3e-174 615.9 438 73.1
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 3.1e-174 615.5 436 72.5
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 3.1e-174 615.5 436 72.7
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 1.5e-173 613.2 436 72.2
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 6.4e-172 607.8 433 72.1
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 1.1e-171 607.1 436 71.6
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 4.1e-171 605.1 434 71.7
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 4.1e-171 605.1 435 71.5
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.6e-170 603.2 433 71.8
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 2.1e-170 602.8 436 71.6
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 3.5e-170 602.1 435 70.8
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 4.6e-170 601.7 433 71.1
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 4.6e-170 601.7 433 71.4
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 1.3e-169 600.1 433 71.8
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.7e-169 599.7 433 71.6
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 1.7e-169 599.7 434 71.7
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 2.3e-169 599.4 435 71.3
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 2.3e-169 599.4 433 71.8
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 2.3e-169 599.4 433 71.8
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.5e-168 596.7 433 71.6
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.9e-168 596.3 433 71.1
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 1.9e-168 596.3 433 70.0
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 1.9e-168 596.3 433 71.4
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 1.9e-168 596.3 433 71.4
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 3.3e-168 595.5 433 71.6
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 4.3e-168 595.1 433 71.1
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 2.8e-167 592.4 435 69.0
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 2.8e-167 592.4 433 71.1
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 3.6e-167 592.0 433 70.4
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 6.2e-167 591.3 433 70.7
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 6.2e-167 591.3 433 71.4
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 3.1e-166 589.0 434 70.0
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 4.0e-166 588.6 436 71.3
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 4.0e-166 588.6 433 70.9
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 8.9e-166 587.4 433 70.0
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.2e-165 587.0 434 70.0
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 1.5e-165 586.6 434 70.5
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 2.6e-165 585.9 433 70.0
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 2.6e-165 585.9 433 69.3
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.4e-165 585.5 432 69.9
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 7.5e-165 584.3 432 70.4
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 7.5e-165 584.3 433 69.5
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 7.5e-165 584.3 433 69.5
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 2.2e-164 582.8 434 69.6
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 2.2e-164 582.8 436 70.0
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 2.9e-164 582.4 460 65.9
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 3.7e-164 582.0 433 69.7
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 3.7e-164 582.0 433 69.7
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 3.7e-164 582.0 450 67.8
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 6.4e-164 581.3 424 69.8
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 8.3e-164 580.9 424 70.3
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 8.3e-164 580.9 433 69.5
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 1.1e-163 580.5 436 69.3
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.1e-163 580.5 434 69.4
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.1e-163 580.5 433 69.5
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.1e-163 580.5 433 69.5
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.4e-163 580.1 433 69.5
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 2.4e-163 579.3 433 68.8
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 7.1e-163 577.8 433 68.8
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 9.2e-163 577.4 433 67.9
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 1.6e-162 576.6 440 68.4
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.6e-162 576.6 436 68.8
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 2.1e-162 576.2 433 69.7
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.1e-162 576.2 436 68.6
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.1e-162 576.2 436 68.6
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 3.5e-162 575.5 433 69.3
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 7.8e-162 574.3 432 66.9
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.0e-161 573.9 434 68.4
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 2.3e-161 572.8 432 68.3
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 3.0e-161 572.4 436 67.9
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 3.9e-161 572.0 472 64.4
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 5.1e-161 571.6 436 67.7
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 5.1e-161 571.6 433 68.8
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 6.6e-161 571.2 434 69.1
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 1.1e-160 570.5 432 68.5
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.9e-160 569.7 430 68.8
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 3.3e-160 568.9 433 67.9
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 4.3e-160 568.5 414 70.5
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 7.3e-160 567.8 433 67.2
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 9.5e-160 567.4 430 68.1
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 1.2e-159 567.0 433 67.9
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 1.2e-159 567.0 424 69.1
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 6.2e-159 564.7 436 68.1
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 6.2e-159 564.7 416 70.0
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 8.1e-159 564.3 436 68.1
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 8.1e-159 564.3 434 67.3
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 1.1e-158 563.9 434 66.6
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 1.1e-158 563.9 433 67.4
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 1.8e-158 563.1 434 67.3
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 1.8e-158 563.1 430 67.0
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 2.4e-158 562.8 436 67.9
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 4.0e-158 562.0 430 68.8
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 5.2e-158 561.6 434 66.8
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 4.4e-157 558.5 433 66.3
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 5.8e-157 558.1 431 65.0
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 5.8e-157 558.1 423 68.1
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.3e-156 557.0 424 67.2
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 1.7e-156 556.6 433 66.7
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 2.2e-156 556.2 430 67.4
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 2.9e-156 555.8 431 65.0
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.4e-155 553.5 433 68.1
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 1.9e-155 553.1 424 66.7
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 1.9e-155 553.1 424 66.7
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 1.9e-155 553.1 424 66.7
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 1.9e-155 553.1 424 66.7
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 1.9e-155 553.1 424 66.7
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.9e-155 553.1 435 67.4
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 4.2e-155 552.0 433 64.7
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 5.4e-155 551.6 434 66.4
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 9.2e-155 550.8 424 68.4
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 1.2e-154 550.4 434 66.4
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 1.6e-154 550.1 419 67.5
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.7e-153 546.6 414 68.1
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 2.3e-153 546.2 467 63.4
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 3.0e-153 545.8 434 66.8
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 3.0e-153 545.8 433 67.2
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 3.9e-153 545.4 413 69.0
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 5.1e-153 545.0 432 66.0
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 1.5e-152 543.5 433 65.4
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 4.3e-152 542.0 426 67.8
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 5.6e-152 541.6 434 65.2
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 3.1e-150 535.8 433 64.9
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 9.0e-150 534.3 430 65.3
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.7e-148 530.0 414 67.1
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 1.4e-147 526.9 428 65.0
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 2.4e-147 526.2 414 66.2
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 3.2e-147 525.8 430 63.7
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 6.6e-145 518.1 432 63.0
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 7.3e-144 514.6 424 64.2
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 6.9e-142 508.1 426 62.9
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 9.3e-139 497.7 332 76.2
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 2.3e-137 493.0 433 57.3
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 6.7e-137 491.5 426 58.9
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 2.1e-135 486.5 433 57.7
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 3.7e-135 485.7 352 70.7
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 6.9e-134 481.5 435 56.8
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 7.6e-133 478.0 434 55.8
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 1.3e-132 477.2 433 56.4
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 1.1e-131 474.2 458 58.3
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 2.5e-131 473.0 429 57.1
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 5.1e-129 465.3 437 55.4
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 8.2e-127 458.0 423 57.4
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 3.4e-125 452.6 324 71.3
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 4.5e-125 452.2 389 62.0
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.3e-124 450.7 347 67.7
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 1.3e-124 450.7 392 60.7
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.1e-123 447.6 410 60.2
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 9.3e-123 444.5 441 56.7
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.1e-120 437.6 431 52.2
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 4.3e-120 435.6 324 70.1
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 3.1e-118 429.5 326 68.1
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 3.9e-113 412.5 343 63.6
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 5.3e-110 402.1 303 68.6
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 3.4e-109 399.4 443 48.5
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 1.0e-108 397.9 322 64.3
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 1.0e-105 387.9 432 46.3
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 1.4e-105 387.5 334 60.5
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 2.4e-102 376.7 335 60.6
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 9.1e-102 374.8 456 46.1
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.5e-101 374.0 433 45.3
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 1.1e-86 324.7 322 56.5
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.7e-85 320.1 219 72.6
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 8.5e-84 315.1 246 64.2
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 9.8e-80 301.6 242 67.4
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 1.3e-79 301.2 196 76.0
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 7.5e-64 248.8 169 75.7
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 8.9e-49 198.7 330 41.5
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 2.1e-37 161.0 132 65.2
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 1.3e-36 158.3 165 52.1
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 1.7e-36 157.9 114 65.8
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 5.1e-36 156.4 433 27.9
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 6.6e-36 156.0 193 48.7
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 3.3e-35 153.7 165 50.9
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 1.1e-33 148.7 505 25.7
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.1e-30 138.7 460 22.8
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 4.8e-26 123.2 342 26.6
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 8.1e-26 122.5 83 71.1
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 3.1e-09 67.4 68 55.9
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 3.1e-09 67.4 48 70.8


User provided reference genes

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