Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold154G37192 Striga asiatica HOM05D001598 ORTHO05D002757 1.0e-93 346.7 172 100.0
SGA_v2.0_scaffold25G11133 Striga asiatica HOM05D001598 ORTHO05D002757 8.4e-59 230.7 156 75.0
SGA_v2.0_scaffold28G11982 Striga asiatica HOM05D001598 ORTHO05D002757 7.4e-47 191.0 97 95.9
MSTRG.21240 Avicennia marina HOM05D001598 ORTHO05D002757 1.9e-42 176.4 157 56.1
Migut.D00847 Erythranthe guttata HOM05D001598 ORTHO05D002757 1.1e-39 167.2 166 51.8
Oeu027581.1 Olea europaea HOM05D001598 ORTHO05D002757 4.0e-37 158.7 164 54.9
Oeu050015.1 Olea europaea HOM05D001598 ORTHO05D002757 2.0e-36 156.4 177 50.8
unitig_699.g19728 Utricularia gibba HOM05D001598 ORTHO05D002757 2.1e-33 146.4 125 58.4
Nitab4.5_0000496g0060 Nicotiana tabacum HOM05D001598 ORTHO05D002757 2.7e-33 146.0 157 54.1
Nitab4.5_0002704g0060 Nicotiana tabacum HOM05D001598 ORTHO05D002757 9.7e-31 137.5 158 51.9
Peaxi162Scf00007g01329 Petunia axillaris HOM05D001598 ORTHO05D002757 1.1e-26 124.0 153 47.1
Sopen05g034910 Solanum pennellii HOM05D001598 ORTHO05D002757 1.9e-26 123.2 154 47.4
Solyc05g056510.3 Solanum lycopersicum HOM05D001598 ORTHO05D002757 9.3e-26 120.9 154 46.8
Dinv44166 Davidia involucrata HOM05D001598 ORTHO05D002757 2.3e-24 116.3 163 45.4
Oeu005496.1 Olea europaea HOM05D000700 ORTHO05D000397 9.7e-23 110.9 146 45.9
Rhsim12G0173100 Rhododendron simsii HOM05D001598 ORTHO05D002757 2.4e-21 106.3 162 43.2
CAN.G1156.51 Capsicum annuum HOM05D001598 ORTHO05D002757 5.3e-21 105.1 159 42.8
Lj5A679G28 Lonicera japonica HOM05D001598 ORTHO05D002757 9.1e-21 104.4 165 41.2
Cc01_g06370 Coffea canephora HOM05D001598 ORTHO05D002757 1.3e-19 100.5 169 40.8
vmacro16663 Vaccinium macrocarpon HOM05D001598 ORTHO05D002757 8.5e-19 97.8 160 40.6
CSS0041589 Camellia sinensis var. sinensis HOM05D001598 ORTHO05D002757 3.2e-18 95.9 113 48.7
Nn7g37454 Nelumbo nucifera HOM05D001598 ORTHO05D002757 2.1e-17 93.2 170 42.4
GSVIVG01038094001 Vitis vinifera HOM05D001598 ORTHO05D002757 1.0e-16 90.9 125 46.4
Actinidia36797 Actinidia chinensis HOM05D001598 ORTHO05D002757 1.4e-16 90.5 117 47.0
Manes.11G105600 Manihot esculenta HOM05D001598 ORTHO05D002757 2.6e-15 86.3 118 40.7
Atru.chr4.1342 Acer truncatum HOM05D001598 ORTHO05D002757 3.3e-15 85.9 126 44.4
Nn1g09429 Nelumbo nucifera HOM05D001598 ORTHO05D002757 3.3e-15 85.9 172 40.1
THA.LOC104820518 Tarenaya hassleriana HOM05D001598 ORTHO05D002757 7.4e-15 84.7 128 39.8
FAN16G3208 Fragaria x ananassa HOM05D001598 ORTHO05D002757 9.7e-15 84.3 126 42.9
RcHm_v2.0_Chr5g0048751 Rosa chinensis HOM05D001598 ORTHO05D002757 9.7e-15 84.3 134 41.0
DCAR_013251 Daucus carota HOM05D001598 ORTHO05D002757 1.3e-14 84.0 124 37.9
FAN25G3483 Fragaria x ananassa HOM05D001598 ORTHO05D002757 1.3e-14 84.0 126 42.1
Cpa.g.sc48.118 Carica papaya HOM05D001598 ORTHO05D002757 2.8e-14 82.8 132 46.2
PGR142G2642 Punica granatum HOM05D001598 ORTHO05D002757 2.8e-14 82.8 136 44.9
FvH4_3g26250 Fragaria vesca HOM05D001598 ORTHO05D002757 3.7e-14 82.4 155 37.4
FAN11G0362 Fragaria x ananassa HOM05D001598 ORTHO05D002757 3.7e-14 82.4 155 37.4
FAN21G0325 Fragaria x ananassa HOM05D001598 ORTHO05D007192 4.8e-14 82.0 127 40.9
Sc25g0002290 Simmondsia chinensis HOM05D001598 ORTHO05D002757 4.8e-14 82.0 131 42.7
Carub.0008s2296 Capsella rubella HOM05D001598 ORTHO05D002757 6.3e-14 81.6 137 41.6
PSO782G1531 Papaver somniferum HOM05D001598 ORTHO05D002757 6.3e-14 81.6 132 40.9
CARHR276050 Cardamine hirsuta HOM05D001598 ORTHO05D002757 8.2e-14 81.3 134 39.6
MBI07_g03083_MAGBIO Magnolia biondii HOM05D001598 ORTHO05D002757 8.2e-14 81.3 169 36.7
CsaV3_3G002830 Cucumis sativus L. HOM05D001598 ORTHO05D002757 1.1e-13 80.9 130 42.3
TWI36G1000 Tripterygium wilfordii HOM05D001598 ORTHO05D002757 1.8e-13 80.1 157 35.7
Sed0000960 Sechium edule HOM05D001598 ORTHO05D002757 2.4e-13 79.7 161 39.8
CiPaw.01G173400 Carya illinoinensis HOM05D001598 ORTHO05D002757 3.1e-13 79.3 126 41.3
Ciclev10020578m.g Citrus clementina HOM05D001598 ORTHO05D002757 5.3e-13 78.6 130 41.5
Hund10980 Selenicereus undatus HOM05D001598 ORTHO05D002757 6.9e-13 78.2 104 41.3
Aa31LG11G1330 Aethionema arabicum HOM05D001598 ORTHO05D002757 1.2e-12 77.4 164 37.8
HPP92_015460 Vanilla planifolia HOM05D001598 ORTHO05D002757 1.2e-12 77.4 117 48.7
AL8G39090 Arabidopsis lyrata HOM05D001598 ORTHO05D002757 2.0e-12 76.6 135 41.5
AT5G62270 Arabidopsis thaliana HOM05D001598 ORTHO05D002757 2.0e-12 76.6 172 39.5
Cfa015220 Carpinus fangiana HOM05D001598 ORTHO05D002757 2.6e-12 76.3 126 40.5
ClCG10G002790 Citrullus lanatus HOM05D001598 ORTHO05D002757 2.6e-12 76.3 130 40.0
QL03p060335 Quercus lobata HOM05D001598 ORTHO05D002757 2.6e-12 76.3 146 38.4
THA.LOC104821398 Tarenaya hassleriana HOM05D001598 ORTHO05D002757 2.6e-12 76.3 111 40.5
QL10p006125 Quercus lobata HOM05D001598 ORTHO05D002757 3.4e-12 75.9 146 38.4
Haze_02583 Corylus avellana HOM05D002054 ORTHO05D005362 4.5e-12 75.5 126 40.5
Atru.chr11.1498 Acer truncatum HOM05D001598 ORTHO05D002757 7.7e-12 74.7 129 39.5
BcaNung07379 Brassica carinata HOM05D001598 ORTHO05D002757 7.7e-12 74.7 132 40.9
PSO063G3912 Papaver somniferum HOM05D001598 ORTHO05D002757 7.7e-12 74.7 132 39.4
Potri.007G133900 Populus trichocarpa HOM05D001598 ORTHO05D002757 7.7e-12 74.7 131 39.7
A06p28990 Brassica napus HOM05D001598 ORTHO05D002757 1.3e-11 73.9 128 39.1
BraA06t25844Z Brassica rapa HOM05D001598 ORTHO05D002757 1.3e-11 73.9 128 39.1
MELO3C013949.2 Cucumis melo HOM05D001598 ORTHO05D002757 1.7e-11 73.6 130 39.2
Thecc.04G200200 Theobroma cacao HOM05D001598 ORTHO05D002757 1.7e-11 73.6 157 34.4
Sabra07G0108700 Salix brachista HOM05D001598 ORTHO05D002757 2.2e-11 73.2 131 40.5
Sabra07G0121000 Salix brachista HOM05D001598 ORTHO05D002757 2.2e-11 73.2 131 40.5
BcaC01g06921 Brassica carinata HOM05D001598 ORTHO05D002757 2.9e-11 72.8 134 40.3
C03p64600 Brassica napus HOM05D001598 ORTHO05D002757 2.9e-11 72.8 134 40.3
BolC3t18718H Brassica oleracea HOM05D001598 ORTHO05D002757 2.9e-11 72.8 134 40.3
Eucgr.H00336 Eucalyptus grandis HOM05D001598 ORTHO05D002757 3.8e-11 72.4 133 36.1
Prupe.4G179500 Prunus persica HOM05D001598 ORTHO05D002757 3.8e-11 72.4 125 36.0
ATR0757G133 Amborella trichopoda HOM05D001598 ORTHO05D002757 5.0e-11 72.0 130 37.7
TAR626G1975 Trochodendron aralioides HOM05D001598 ORTHO05D002757 8.5e-11 71.2 88 45.5
Os01g0801700 Oryza sativa ssp. japonica HOM05D001598 ORTHO05D002757 1.4e-10 70.5 103 43.7
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.9e-10 70.1 155 32.9
MD03G1229800 Malus domestica HOM05D001598 ORTHO05D002757 1.9e-10 70.1 88 45.5
Lsat_1_v5_gn_8_112440 Lactuca sativa HOM05D001598 ORTHO05D002757 2.5e-10 69.7 166 34.3
Potri.017G017901 Populus trichocarpa HOM05D001598 ORTHO05D002757 2.5e-10 69.7 147 36.1
Lsat_1_v5_gn_8_69520 Lactuca sativa HOM05D001598 ORTHO05D002757 9.4e-10 67.8 165 32.1
BolC2t12266H Brassica oleracea HOM05D001598 ORTHO05D002757 1.2e-09 67.4 161 33.5
Sp2g25470 Schrenkiella parvula HOM05D001598 ORTHO05D002757 1.2e-09 67.4 130 40.0
MD11G1250300 Malus domestica HOM05D001598 ORTHO05D002757 1.6e-09 67.0 88 43.2
Aqoxy7G03836 Aquilegia oxysepala HOM05D001598 ORTHO05D002757 4.7e-09 65.5 175 35.4
Thhalv10004417m.g Eutrema salsugineum HOM05D001598 ORTHO05D002757 6.1e-09 65.1 156 35.3
Psat5g075120 Pisum sativum HOM05D001598 ORTHO05D002757 1.0e-08 64.3 102 38.2
Phvul.009G242000 Phaseolus vulgaris HOM05D001598 ORTHO05D002757 1.8e-08 63.5 102 43.1
Ca_01999_v3 Cicer arietinum L. HOM05D001598 ORTHO05D002757 2.3e-08 63.2 97 38.1
Thhalv10000666m.g Eutrema salsugineum HOM05D001598 ORTHO05D002757 2.3e-08 63.2 125 39.2
AUR62020850 Chenopodium quinoa HOM05D001598 ORTHO05D002757 3.9e-08 62.4 132 32.6
arahy.Tifrunner.gnm1.ann1.9TX8HM Arachis hypogaea HOM05D001598 ORTHO05D002757 5.2e-08 62.0 100 40.0
Duzib212G0742 Durio zibethinus HOM05D001598 ORTHO05D002757 6.7e-08 61.6 157 33.1
TPR.G31851 Trifolium pratense HOM05D001598 ORTHO05D002757 1.1e-07 60.8 105 38.1
Gorai.005G030700 Gossypium raimondii HOM05D001598 ORTHO05D002757 1.5e-07 60.5 140 32.9
arahy.Tifrunner.gnm1.ann1.F1G1DC Arachis hypogaea HOM05D001598 ORTHO05D002757 2.0e-07 60.1 100 40.0
AUR62018568 Chenopodium quinoa HOM05D001598 ORTHO05D002757 2.0e-07 60.1 162 30.9
BcaNung06719 Brassica carinata HOM05D001598 ORTHO05D002757 3.3e-07 59.3 88 43.2
Gohir.D02G024800 Gossypium hirsutum HOM05D001598 ORTHO05D002757 3.3e-07 59.3 140 33.6
Lj6g0023615 Lotus japonicus HOM05D001598 ORTHO05D002757 3.3e-07 59.3 93 39.8
Gohir.A02G020800 Gossypium hirsutum HOM05D001598 ORTHO05D002757 4.4e-07 58.9 101 35.6
Lalb_Chr18g0052141 Lupinus albus HOM05D001598 ORTHO05D002757 4.4e-07 58.9 98 34.7
BcaB07g29787 Brassica carinata HOM05D001598 ORTHO05D002757 5.7e-07 58.5 92 38.0
VMungo1309G2065 Vigna mungo HOM05D001598 ORTHO05D002757 7.4e-07 58.2 102 37.3
BcaC03g18140 Brassica carinata HOM05D001598 ORTHO05D002757 2.2e-06 56.6 160 31.2
CDE03G0379 Ceratophyllum demersum HOM05D001598 ORTHO05D002757 2.2e-06 56.6 119 35.3
CDE06G0993 Ceratophyllum demersum HOM05D001598 ORTHO05D002757 2.2e-06 56.6 119 37.0
Glyma.15G158100 Glycine max HOM05D001598 ORTHO05D002757 3.7e-06 55.8 102 37.3
A02p42210 Brassica napus HOM05D001598 ORTHO05D002757 4.8e-06 55.5 169 29.6
C02p62070 Brassica napus HOM05D001598 ORTHO05D002757 4.8e-06 55.5 170 30.0
BraA02t09150Z Brassica rapa HOM05D001598 ORTHO05D002757 4.8e-06 55.5 170 30.0
Thhalv10010049m.g Eutrema salsugineum HOM05D001598 ORTHO05D002757 6.3e-06 55.1 88 44.3
CANSAT80G0504 Cannabis sativa HOM05D001598 ORTHO05D002757 8.2e-06 54.7 134 32.8


User provided reference genes

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