Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold154G37160 Striga asiatica HOM05D004649 ORTHO05D005446 1.3e-238 829.3 427 100.0
MSTRG.15559 Avicennia marina HOM05D004649 ORTHO05D005446 1.1e-195 686.8 429 81.1
Migut.K01446 Erythranthe guttata HOM05D004649 ORTHO05D005446 8.7e-190 667.2 429 80.2
Dinv33366 Davidia involucrata HOM05D004649 ORTHO05D005446 6.4e-185 651.0 429 76.9
CSS0030171 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 3.2e-184 648.7 429 76.0
Sopen02g038570 Solanum pennellii HOM05D004649 ORTHO05D005446 7.1e-184 647.5 429 75.1
CSS0047966 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 9.3e-184 647.1 429 76.0
PGSC0003DMG400020222 Solanum tuberosum HOM05D004649 ORTHO05D005446 2.7e-183 645.6 429 74.4
Dinv25679 Davidia involucrata HOM05D004649 ORTHO05D005446 6.0e-183 644.4 435 76.3
Solyc02g093920.2 Solanum lycopersicum HOM05D004649 ORTHO05D005446 6.0e-183 644.4 429 74.8
Nitab4.5_0001031g0020 Nicotiana tabacum HOM05D004649 ORTHO05D005446 4.3e-181 638.3 426 73.7
QL02p072453 Quercus lobata HOM05D004649 ORTHO05D005446 6.2e-180 634.4 423 76.1
CAN.G473.77 Capsicum annuum HOM05D004649 ORTHO05D005446 2.4e-179 632.5 429 73.4
GSVIVG01001824001 Vitis vinifera HOM05D004649 ORTHO05D005446 5.3e-179 631.3 423 74.9
Nitab4.5_0000559g0250 Nicotiana tabacum HOM05D004649 ORTHO05D005446 2.2e-177 625.9 429 73.7
Actinidia05924 Actinidia chinensis HOM05D004649 ORTHO05D005446 1.9e-176 622.9 430 74.2
vmacro05936 Vaccinium macrocarpon HOM05D004649 ORTHO05D005446 9.3e-176 620.5 430 73.7
Rhsim10G0008900 Rhododendron simsii HOM05D004649 ORTHO05D005446 3.0e-174 615.5 430 73.0
Thecc.04G029900 Theobroma cacao HOM05D004649 ORTHO05D005446 5.1e-174 614.8 421 73.9
Potri.001G334200 Populus trichocarpa HOM05D004649 ORTHO05D005446 1.9e-173 612.8 424 73.1
TWI36G0899 Tripterygium wilfordii HOM05D004649 ORTHO05D005446 9.7e-173 610.5 424 72.6
Glyma.05G075400 Glycine max HOM05D004649 ORTHO05D005446 1.6e-172 609.8 422 73.5
Nitab4.5_0006819g0030 Nicotiana tabacum HOM05D004649 ORTHO05D005446 1.6e-172 609.8 430 72.3
Duzib264G0046 Durio zibethinus HOM05D004649 ORTHO05D005446 8.2e-172 607.4 424 73.1
CiPaw.04G034500 Carya illinoinensis HOM05D004649 ORTHO05D005446 1.4e-171 606.7 419 72.3
Manes.17G106100 Manihot esculenta HOM05D004649 ORTHO05D005446 5.3e-171 604.7 422 72.0
Gorai.012G088900 Gossypium raimondii HOM05D004649 ORTHO05D005446 6.9e-171 604.4 424 72.4
TAR371G0838 Trochodendron aralioides HOM05D004649 ORTHO05D005446 6.9e-171 604.4 423 72.1
Glyma.19G075700 Glycine max HOM05D004649 ORTHO05D005446 2.0e-170 602.8 422 73.0
CANSAT64G0679 Cannabis sativa HOM05D004649 ORTHO05D005446 3.4e-170 602.1 423 72.6
Prupe.3G302400 Prunus persica HOM05D004649 ORTHO05D005446 7.7e-170 600.9 422 71.8
Gohir.D04G079000 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.0e-169 600.5 422 72.3
Gorai.006G040000 Gossypium raimondii HOM05D004649 ORTHO05D005446 1.3e-169 600.1 424 71.7
Gohir.A05G340700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 1.7e-169 599.7 424 71.7
HanXRQChr14g0450901 Helianthus annuus HOM05D004649 ORTHO05D005446 3.8e-169 598.6 429 69.7
DCAR_011306 Daucus carota HOM05D004649 ORTHO05D005446 6.5e-169 597.8 430 69.5
Gohir.A09G034200 Gossypium hirsutum HOM05D004649 ORTHO05D005446 6.5e-169 597.8 424 71.5
PGR142G2348 Punica granatum HOM05D004649 ORTHO05D005446 6.5e-169 597.8 428 70.1
VMungo1080G0439 Vigna mungo HOM05D004649 ORTHO05D005446 8.5e-169 597.4 422 72.3
Cc07_g00570 Coffea canephora HOM05D004649 ORTHO05D005446 1.1e-168 597.0 435 72.0
AUR62036815 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.9e-168 596.3 423 71.2
Atru.chr6.2512 Acer truncatum HOM05D004649 ORTHO05D005446 4.2e-168 595.1 423 71.6
FAN09G0187 Fragaria x ananassa HOM05D004649 ORTHO05D005446 9.4e-168 594.0 422 70.9
Ciclev10015345m.g Citrus clementina HOM05D004649 ORTHO05D005446 2.1e-167 592.8 423 71.4
AUR62033709 Chenopodium quinoa HOM05D004649 ORTHO05D005446 2.7e-167 592.4 423 70.4
FAN02G2492 Fragaria x ananassa HOM05D004649 ORTHO05D005446 6.1e-167 591.3 422 70.9
arahy.Tifrunner.gnm1.ann1.2RTQ1W Arachis hypogaea HOM05D004649 ORTHO05D005446 7.9e-167 590.9 424 71.7
FvH4_6g52990 Fragaria vesca HOM05D004649 ORTHO05D005446 7.9e-167 590.9 422 70.6
Phvul.004G055700 Phaseolus vulgaris HOM05D004649 ORTHO05D005446 2.3e-166 589.3 422 71.8
Duzib147G0539 Durio zibethinus HOM05D004649 ORTHO05D005446 5.1e-166 588.2 424 71.7
RcHm_v2.0_Chr2g0174731 Rosa chinensis HOM05D004649 ORTHO05D005446 5.1e-166 588.2 422 70.4
Lsat_1_v5_gn_2_93941 Lactuca sativa HOM05D004649 ORTHO05D005446 1.1e-165 587.0 429 68.5
Ca_04417_v3 Cicer arietinum L. HOM05D004649 ORTHO05D005446 1.7e-164 583.2 423 70.0
ECA238G0199 Erigeron canadensis HOM05D004649 ORTHO05D005446 2.8e-164 582.4 427 67.7
CsaV3_6G001150 Cucumis sativus L. HOM05D004649 ORTHO05D005446 4.8e-164 581.6 423 70.7
MELO3C008213.2 Cucumis melo HOM05D004649 ORTHO05D005446 6.3e-164 581.3 423 70.9
Lalb_Chr02g0157841 Lupinus albus HOM05D004649 ORTHO05D005446 6.3e-164 581.3 424 70.5
arahy.Tifrunner.gnm1.ann1.B3K3FC Arachis hypogaea HOM05D004649 ORTHO05D005446 5.3e-163 578.2 431 69.8
CAN.G1965.13 Capsicum annuum HOM05D004649 ORTHO05D005446 6.9e-163 577.8 424 68.4
Gohir.D09G035100 Gossypium hirsutum HOM05D004649 ORTHO05D005446 9.1e-163 577.4 424 70.3
HanXRQChr07g0198311 Helianthus annuus HOM05D004649 ORTHO05D005446 9.1e-163 577.4 429 67.8
MD17G1015500 Malus domestica HOM05D004649 ORTHO05D005446 5.9e-162 574.7 421 68.6
CiPaw.03G052200 Carya illinoinensis HOM05D004649 ORTHO05D005446 2.9e-161 572.4 423 68.6
Peaxi162Scf00420g00411 Petunia axillaris HOM05D004649 ORTHO05D005446 5.0e-161 571.6 438 68.5
TPR.G7524 Trifolium pratense HOM05D004649 ORTHO05D005446 6.5e-161 571.2 424 69.8
COL.COLO4_08766 Corchorus olitorius HOM05D004649 ORTHO05D005446 1.1e-160 570.5 422 71.6
FAN05G5354 Fragaria x ananassa HOM05D004649 ORTHO05D005446 9.4e-160 567.4 464 64.4
MD09G1015400 Malus domestica HOM05D004649 ORTHO05D005446 1.8e-158 563.1 422 67.1
Nitab4.5_0002887g0140 Nicotiana tabacum HOM05D004649 ORTHO05D005446 6.7e-158 561.2 429 67.4
Lj7C608T4 Lonicera japonica HOM05D004649 ORTHO05D005446 1.5e-157 560.1 429 69.7
Cpa.g.sc130.9 Carica papaya HOM05D004649 ORTHO05D005446 2.0e-157 559.7 425 68.0
Eucgr.I01664 Eucalyptus grandis HOM05D004649 ORTHO05D005446 3.3e-157 558.9 401 68.8
Medtr6g023350 Medicago truncatula HOM05D004649 ORTHO05D005446 4.4e-157 558.5 424 67.9
Peaxi162Scf00700g00129 Petunia axillaris HOM05D004649 ORTHO05D005446 5.7e-157 558.1 423 69.5
THA.LOC104821114 Tarenaya hassleriana HOM05D004649 ORTHO05D005446 1.3e-156 557.0 422 69.0
Lj1g0022023 Lotus japonicus HOM05D004649 ORTHO05D005446 7.0e-155 551.2 424 66.7
ClCG11G006900 Citrullus lanatus HOM05D004649 ORTHO05D005446 1.0e-153 547.4 457 64.3
Sed0002339 Sechium edule HOM05D004649 ORTHO05D005446 1.3e-153 547.0 423 67.6
Haze_14832 Corylus avellana HOM05D004649 ORTHO05D005446 6.5e-153 544.7 456 63.6
Aqoxy5G03494 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 8.5e-153 544.3 427 64.4
unitig_52.g17652 Utricularia gibba HOM05D004649 ORTHO05D005446 2.5e-152 542.7 441 66.0
Thhalv10013615m.g Eutrema salsugineum HOM05D004649 ORTHO05D005446 7.2e-152 541.2 425 66.1
Psat1g084880 Pisum sativum HOM05D004649 ORTHO05D005446 1.6e-151 540.0 424 66.0
HPP92_017768 Vanilla planifolia HOM05D004649 ORTHO05D005446 1.8e-150 536.6 420 65.2
Aa31LG11G15040 Aethionema arabicum HOM05D004649 ORTHO05D005446 3.0e-150 535.8 425 65.4
PSO782G5348 Papaver somniferum HOM05D004649 ORTHO05D005446 8.8e-150 534.3 422 64.5
Sp6g29780 Schrenkiella parvula HOM05D004649 ORTHO05D005446 2.6e-149 532.7 425 64.5
BcaNung03172 Brassica carinata HOM05D004649 ORTHO05D005446 7.4e-149 531.2 425 64.5
Hund06757 Selenicereus undatus HOM05D004649 ORTHO05D005446 1.3e-148 530.4 423 66.4
CDE09G0552 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 1.7e-148 530.0 420 63.6
C02p06640 Brassica napus HOM05D004649 ORTHO05D005446 8.2e-148 527.7 426 64.6
Sc07g0004210 Simmondsia chinensis HOM05D004649 ORTHO05D005446 9.1e-147 524.2 381 72.2
BcaC03g13505 Brassica carinata HOM05D004649 ORTHO05D005446 1.6e-146 523.5 426 64.1
Nn2g10549 Nelumbo nucifera HOM05D004649 ORTHO05D005446 1.6e-146 523.5 423 62.9
BolC2t06607H Brassica oleracea HOM05D005656 ORTHO05D005446 2.0e-146 523.1 425 64.0
DCAR_015086 Daucus carota HOM05D004649 ORTHO05D005446 1.3e-145 520.4 421 61.5
BraA02t05210Z Brassica rapa HOM05D004649 ORTHO05D005446 1.7e-145 520.0 425 63.5
A02p02400 Brassica napus HOM05D005656 ORTHO05D007094 2.2e-145 519.6 424 63.4
Gohir.D10G084700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 4.2e-144 515.4 424 63.0
A03p06510 Brassica napus HOM05D004649 ORTHO05D005446 4.7e-143 511.9 425 64.0
BraA03t09983Z Brassica rapa HOM05D004649 ORTHO05D005446 6.7e-142 508.1 425 63.3
Carub.0006s1245 Capsella rubella HOM05D004649 ORTHO05D005446 6.7e-142 508.1 425 62.4
C09p62910 Brassica napus HOM05D005656 ORTHO05D007094 1.2e-141 507.3 424 62.7
BolC9t59128H Brassica oleracea HOM05D005656 ORTHO05D007094 1.2e-141 507.3 424 62.7
BcaB08g36970 Brassica carinata HOM05D004649 ORTHO05D005446 3.3e-141 505.8 425 63.1
Manes.15G158000 Manihot esculenta HOM05D004649 ORTHO05D005446 4.4e-141 505.4 313 79.9
BraA10t44487Z Brassica rapa HOM05D005656 ORTHO05D007094 7.5e-141 504.6 424 61.8
BcaC04g19049 Brassica carinata HOM05D005656 ORTHO05D007094 9.7e-141 504.2 424 62.5
Gorai.011G092400 Gossypium raimondii HOM05D004649 ORTHO05D005446 3.7e-140 502.3 424 63.4
Potri.017G066300 Populus trichocarpa HOM05D004649 ORTHO05D005446 3.7e-140 502.3 324 78.1
AT5G14250 Arabidopsis thaliana HOM05D004649 ORTHO05D005446 1.8e-139 500.0 425 61.9
A10p24220 Brassica napus HOM05D005656 ORTHO05D007094 5.3e-139 498.4 424 61.6
Os08g0119000 Oryza sativa ssp. japonica HOM05D004649 ORTHO05D005446 1.6e-138 496.9 424 62.0
AL6G24930 Arabidopsis lyrata HOM05D004649 ORTHO05D005446 1.0e-137 494.2 390 65.4
Zm00001eb261210 Zea mays HOM05D004649 ORTHO05D005446 1.0e-137 494.2 423 61.7
BcaB01g06336 Brassica carinata HOM05D004649 ORTHO05D005446 8.5e-137 491.1 425 60.2
CARHR199090 Cardamine hirsuta HOM05D004649 ORTHO05D005446 1.1e-136 490.7 387 65.9
Aqoxy3G01472 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 2.5e-136 489.6 418 61.2
Sed0000018 Sechium edule HOM05D004649 ORTHO05D005446 8.3e-132 474.6 423 60.0
ATR0124G048 Amborella trichopoda HOM05D004649 ORTHO05D005446 1.2e-130 470.7 360 64.4
CDE02G4363 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 1.2e-125 454.1 444 56.1
SMO351G0195 Selaginella moellendorffii HOM05D004649 ORTHO05D005446 2.7e-122 443.0 424 53.8
Mapoly0005s0216 Marchantia polymorpha HOM05D004649 ORTHO05D005446 1.5e-120 437.2 425 53.4
Pp3c11_20060 Physcomitrium patens HOM05D004649 ORTHO05D005446 2.5e-120 436.4 425 53.2
AagrBONN_evm.TU.Sc2ySwM_368.1057 Anthoceros agrestis HOM05D004649 ORTHO05D005446 2.0e-114 416.8 449 48.8
EL10As11g23981 Beta vulgaris HOM05D004649 ORTHO05D005446 2.3e-113 413.3 383 60.3
PSO017G3153 Papaver somniferum HOM05D004649 ORTHO05D005446 1.4e-107 394.0 397 55.4
CBR_g75710 Chara braunii HOM05D004649 ORTHO05D005446 2.4e-107 393.3 428 50.0
Sabra16G0215300 Salix brachista HOM05D004649 ORTHO05D005446 3.9e-105 386.0 241 80.1
Hma1.2p1_0571F.1_g180750 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 1.5e-104 384.0 239 80.3
Nn3g16527 Nelumbo nucifera HOM05D004649 ORTHO05D005446 5.1e-97 359.0 282 62.4
Actinidia36180 Actinidia chinensis HOM05D004649 ORTHO05D005446 1.5e-96 357.5 432 52.5
BcaB01g05123 Brassica carinata HOM05D004649 ORTHO05D005446 1.5e-96 357.5 351 55.6
C03p07530 Brassica napus HOM05D004649 ORTHO05D005446 2.1e-95 353.6 356 54.5
Zm00001eb173540 Zea mays HOM05D004649 ORTHO05D005446 5.2e-94 349.0 334 58.4
Cre16.g671100 Chlamydomonas reinhardtii HOM05D004649 ORTHO05D005446 2.2e-68 263.8 429 37.1
Gohir.A01G185660 Gossypium hirsutum HOM05D004649 ORTHO05D005446 3.2e-67 260.0 214 65.4
C09p61600 Brassica napus HOM05D004649 ORTHO05D005446 9.6e-64 248.4 325 46.2
PRCOL_00002547 Prasinoderma coloniale HOM05D004649 ORTHO05D005446 5.8e-61 239.2 338 39.9
CAN.G473.64 Capsicum annuum HOM05D004649 ORTHO05D005446 1.9e-59 234.2 192 65.1
BcaC04g18970 Brassica carinata HOM05D004649 ORTHO05D005446 4.1e-54 216.5 359 42.1
A03p07400 Brassica napus HOM05D004649 ORTHO05D005446 1.2e-53 214.9 194 58.8
BolC9t59028H Brassica oleracea HOM05D004649 ORTHO05D005446 7.4e-48 195.7 305 42.6
BraA03t10063Z Brassica rapa HOM05D004649 ORTHO05D005446 1.7e-47 194.5 194 53.6
SEGI_26946 Sequoiadendron giganteum HOM05D004649 ORTHO05D005446 4.2e-43 179.9 145 61.4
Sabra07G0059200 Salix brachista HOM05D004649 ORTHO05D005446 1.8e-41 174.5 250 44.8
MCO12G022 Micromonas commoda HOM05D004649 ORTHO05D005446 5.7e-32 142.9 313 31.0
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 4.1e-30 136.7 193 45.1
BolC3t13254H Brassica oleracea HOM05D004649 ORTHO05D005446 2.0e-29 134.4 106 66.0
FAN09G3197 Fragaria x ananassa HOM05D004649 ORTHO05D005446 2.6e-24 117.5 119 54.6
BcaB08g36975 Brassica carinata HOM05D005656 ORTHO05D007094 4.8e-23 113.2 76 71.1
Duzib268G1750 Durio zibethinus HOM05D004649 ORTHO05D005446 1.6e-21 108.2 124 49.2
QL12p000006 Quercus lobata HOM05D004649 ORTHO05D005446 1.0e-20 105.5 78 65.4
QL12p000135 Quercus lobata HOM05D004649 ORTHO05D005446 1.0e-20 105.5 78 65.4
Oeu042415.1 Olea europaea HOM05D004649 ORTHO05D005446 1.1e-14 85.5 48 85.4
Aqoxy5G03476 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 4.5e-13 80.1 128 42.2
ECA232G4246 Erigeron canadensis HOM05D004649 ORTHO05D005446 9.5e-11 72.4 65 55.4
Hma1.2p1_0571F.1_g180740 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 1.2e-10 72.0 66 59.1
FvH4_2g01181 Fragaria vesca HOM05D000564 ORTHO05D005446 6.8e-09 66.2 53 69.8
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 1.7e-07 61.6 49 61.2
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 1.7e-07 61.6 49 61.2
FAN14G5770 Fragaria x ananassa HOM05D004649 ORTHO05D005446 3.2e-06 57.4 48 56.2
EL10As11g23980 Beta vulgaris HOM05D004649 ORTHO05D005446 5.4e-06 56.6 37 64.9
FvH4_6g52500 Fragaria vesca HOM05D004649 ORTHO05D005446 9.2e-06 55.8 48 56.2


User provided reference genes

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