Gene: AT5G14250

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G14250
  • Transcript Identifier AT5G14250.1
  • Gene Type Coding gene
  • Location Chr5 : 4597970-4600561 : positive

Gene Family Information

  • ID HOM05D004649
  • #Genes/#Species 156/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G14250.1
  • symbol COP13
  • Alias CSN3,COP9 SIGNALOSOME SUBUNIT 3,FUS11,FUSCA 11
  • full_name CONSTITUTIVE PHOTOMORPHOGENIC 13
  • uniprot Q8W575

Descriptions

  • Description Proteasome component (PCI) domain protein
  • Computational description CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13); CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009640
TAS
Gene Ontologyphotomorphogenesis1
GO:0000338
IMP
Gene Ontologyprotein deneddylation2
GO:0010971
IMP
Gene Ontologypositive regulation of G2/M transition of mitotic cell cycle3
GO:0006511
IBA
Gene Ontologyubiquitin-dependent protein catabolic process4
GO:0009585
IEA
GOA Databasered, far-red light phototransduction
GO:0010017
IEA
GOA Databasered or far-red light signaling pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008180
IEA
GOA DatabaseCOP9 signalosome
GO:0008180
IPI
IBA
TAS
Gene OntologyCOP9 signalosome1 4 6
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000717 Proteasome component (PCI) domain
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
19.2.3.3.1.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN3