Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold153G36926 Striga asiatica HOM05D001240 ORTHO05D002450 4.4e-144 514.6 261 100.0
SGA_v2.0_scaffold153G36928 Striga asiatica HOM05D001240 ORTHO05D002450 1.1e-22 111.3 107 64.5
SGA_v2.0_scaffold153G36935 Striga asiatica HOM05D001240 ORTHO05D002450 5.4e-17 92.4 62 83.9
SGA_v2.0_scaffold52G19205 Striga asiatica HOM05D001240 ORTHO05D003764 5.1e-15 85.9 62 79.0
unitig_8.g3840 Utricularia gibba HOM05D001240 ORTHO05D002450 1.5e-14 84.3 62 79.0
MSTRG.17144 Avicennia marina HOM05D001240 ORTHO05D002450 2.5e-14 83.6 62 77.4
Oeu063219.1 Olea europaea HOM05D001240 ORTHO05D002450 4.7e-13 79.3 62 72.6
Oeu061501.1 Olea europaea HOM05D001240 ORTHO05D002450 6.2e-13 79.0 62 72.6
Oeu061502.1 Olea europaea HOM05D001240 ORTHO05D002450 6.2e-13 79.0 62 72.6
CiPaw.13G029600 Carya illinoinensis HOM05D001240 ORTHO05D002450 3.1e-12 76.6 62 71.0
Thecc.01G388000 Theobroma cacao HOM05D001240 ORTHO05D002450 3.1e-12 76.6 62 69.4
Cc02_g24800 Coffea canephora HOM05D001240 ORTHO05D002450 4.0e-12 76.3 98 54.1
Migut.B01559 Erythranthe guttata HOM05D001240 ORTHO05D002450 4.0e-12 76.3 62 71.0
Dinv02630 Davidia involucrata HOM05D001240 ORTHO05D002450 5.2e-12 75.9 62 69.4
COL.COLO4_12451 Corchorus olitorius HOM05D001240 ORTHO05D002450 6.8e-12 75.5 62 69.4
Lj9A560G41 Lonicera japonica HOM05D001240 ORTHO05D002450 8.9e-12 75.1 62 67.7
Actinidia12166 Actinidia chinensis HOM05D001240 ORTHO05D002450 2.0e-11 73.9 62 69.4
Gohir.A11G077100 Gossypium hirsutum HOM05D001240 ORTHO05D002450 3.4e-11 73.2 62 67.7
Gohir.D11G081500 Gossypium hirsutum HOM05D001240 ORTHO05D002450 3.4e-11 73.2 62 67.7
Gorai.007G087200 Gossypium raimondii HOM05D001240 ORTHO05D002450 3.4e-11 73.2 62 67.7
MD07G1098900 Malus domestica HOM05D001240 ORTHO05D002450 3.4e-11 73.2 101 50.5
PGR004G1996 Punica granatum HOM05D001240 ORTHO05D002450 3.4e-11 73.2 103 49.5
SGA_v2.0_scaffold153G36927 Striga asiatica HOM05D016441 ORTHO05D406268 3.4e-11 73.2 141 40.4
GSVIVG01018223001 Vitis vinifera HOM05D001240 ORTHO05D002450 3.4e-11 73.2 62 67.7
Duzib138G0437 Durio zibethinus HOM05D001240 ORTHO05D002450 4.4e-11 72.8 62 67.7
Gohir.D08G040700 Gossypium hirsutum HOM05D001240 ORTHO05D002450 4.4e-11 72.8 62 67.7
Duzib268G0901 Durio zibethinus HOM05D001240 ORTHO05D002450 5.8e-11 72.4 62 67.7
Gohir.A08G029900 Gossypium hirsutum HOM05D001240 ORTHO05D002450 5.8e-11 72.4 62 67.7
Gorai.004G039600 Gossypium raimondii HOM05D001240 ORTHO05D002450 5.8e-11 72.4 62 67.7
ECA234G2180 Erigeron canadensis HOM05D001240 ORTHO05D002450 9.9e-11 71.6 62 64.5
Lsat_1_v5_gn_4_43721 Lactuca sativa HOM05D001240 ORTHO05D002450 9.9e-11 71.6 62 64.5
ATR0057G002 Amborella trichopoda HOM05D001240 ORTHO05D002450 1.3e-10 71.2 67 62.7
CiPaw.14G023600 Carya illinoinensis HOM05D001240 ORTHO05D002450 1.3e-10 71.2 103 47.6
TWI59G0329 Tripterygium wilfordii HOM05D001240 ORTHO05D002450 1.3e-10 71.2 65 63.1
HanXRQChr05g0138451 Helianthus annuus HOM05D001240 ORTHO05D002450 2.2e-10 70.5 62 62.9
RcHm_v2.0_Chr1g0346311 Rosa chinensis HOM05D001240 ORTHO05D002450 2.2e-10 70.5 62 64.5
TPR.G39045 Trifolium pratense HOM05D001240 ORTHO05D002450 2.2e-10 70.5 62 61.3
TWI23G0115 Tripterygium wilfordii HOM05D001240 ORTHO05D002450 2.2e-10 70.5 103 45.6
CAN.G255.1 Capsicum annuum HOM05D001240 ORTHO05D002450 2.9e-10 70.1 62 64.5
FAN03G0248 Fragaria x ananassa HOM05D001240 ORTHO05D002450 2.9e-10 70.1 62 66.1
Lj1g0014311 Lotus japonicus HOM05D001240 ORTHO05D002450 3.8e-10 69.7 62 61.3
Sc25g0000760 Simmondsia chinensis HOM05D001240 ORTHO05D002450 3.8e-10 69.7 65 64.6
vmacro13473 Vaccinium macrocarpon HOM05D001240 ORTHO05D002450 3.8e-10 69.7 62 64.5
FAN10G1201 Fragaria x ananassa HOM05D001240 ORTHO05D002450 4.9e-10 69.3 101 47.5
FAN10G2665 Fragaria x ananassa HOM05D001240 ORTHO05D002450 4.9e-10 69.3 101 47.5
Ca_07362_v3 Cicer arietinum L. HOM05D001240 ORTHO05D002450 6.4e-10 68.9 62 59.7
MBI04_g09531_MAGBIO Magnolia biondii HOM05D001240 ORTHO05D002450 6.4e-10 68.9 64 64.1
FAN01G0771 Fragaria x ananassa HOM05D001240 ORTHO05D002450 8.4e-10 68.6 62 64.5
FAN06G2617 Fragaria x ananassa HOM05D001240 ORTHO05D002450 8.4e-10 68.6 62 64.5
FAN06G3317 Fragaria x ananassa HOM05D001240 ORTHO05D002450 8.4e-10 68.6 62 64.5
Manes.05G051900 Manihot esculenta HOM05D001240 ORTHO05D002450 8.4e-10 68.6 106 44.3
Phvul.008G141100 Phaseolus vulgaris HOM05D001240 ORTHO05D002450 8.4e-10 68.6 62 61.3
Sabra14G0041000 Salix brachista HOM05D001240 ORTHO05D002450 8.4e-10 68.6 99 47.5
VMungo1383G0153 Vigna mungo HOM05D001240 ORTHO05D002450 8.4e-10 68.6 62 61.3
CsaV3_3G007480 Cucumis sativus L. HOM05D001240 ORTHO05D002450 1.1e-09 68.2 62 66.1
Duzib133G0682 Durio zibethinus HOM05D001240 ORTHO05D002450 1.1e-09 68.2 62 61.3
MD02G1218200 Malus domestica HOM05D001240 ORTHO05D002450 1.1e-09 68.2 78 53.8
Peaxi162Scf00018g00311 Petunia axillaris HOM05D001240 ORTHO05D002450 1.1e-09 68.2 62 64.5
THA.LOC104817201 Tarenaya hassleriana HOM05D001240 ORTHO05D002450 1.1e-09 68.2 62 62.9
Gohir.A08G137833 Gossypium hirsutum HOM05D001240 ORTHO05D002450 1.4e-09 67.8 62 64.5
Gorai.004G165100 Gossypium raimondii HOM05D001240 ORTHO05D002450 1.4e-09 67.8 62 64.5
Manes.01G271200 Manihot esculenta HOM05D001240 ORTHO05D002450 1.9e-09 67.4 65 61.5
Aa31LG1G26550 Aethionema arabicum HOM05D001240 ORTHO05D002450 2.4e-09 67.0 162 35.8
AL4G44060 Arabidopsis lyrata HOM05D001240 ORTHO05D002450 2.4e-09 67.0 62 59.7
AT2G44950 Arabidopsis thaliana HOM05D001240 ORTHO05D002450 2.4e-09 67.0 62 59.7
Carub.0004s2756 Capsella rubella HOM05D001240 ORTHO05D002450 2.4e-09 67.0 62 59.7
CARHR140190 Cardamine hirsuta HOM05D001240 ORTHO05D002450 2.4e-09 67.0 62 59.7
Nn1g00928 Nelumbo nucifera HOM05D001240 ORTHO05D002450 2.4e-09 67.0 128 40.6
Sp4g27030 Schrenkiella parvula HOM05D001240 ORTHO05D002450 2.4e-09 67.0 62 59.7
ClCG05G000330 Citrullus lanatus HOM05D001240 ORTHO05D003764 3.2e-09 66.6 62 64.5
Ciclev10018789m.g Citrus clementina HOM05D001240 ORTHO05D002450 3.2e-09 66.6 61 62.3
Thhalv10001306m.g Eutrema salsugineum HOM05D001240 ORTHO05D002450 3.2e-09 66.6 62 59.7
FvH4_7g09510 Fragaria vesca HOM05D001240 ORTHO05D002450 3.2e-09 66.6 62 62.9
Gohir.D08G159100 Gossypium hirsutum HOM05D001240 ORTHO05D002450 4.1e-09 66.2 62 62.9
TAR374G1704 Trochodendron aralioides HOM05D001240 ORTHO05D002450 4.1e-09 66.2 127 40.9
HPP92_015119 Vanilla planifolia HOM05D001240 ORTHO05D002450 4.1e-09 66.2 101 45.5
arahy.Tifrunner.gnm1.ann1.PNMP4P Arachis hypogaea HOM05D001240 ORTHO05D002450 5.4e-09 65.9 69 53.6
C04p71340 Brassica napus HOM05D001240 ORTHO05D002450 5.4e-09 65.9 62 58.1
CDE11G1177 Ceratophyllum demersum HOM05D001240 ORTHO05D002450 5.4e-09 65.9 62 64.5
BcaB06g29409 Brassica carinata HOM05D001240 ORTHO05D002450 7.1e-09 65.5 62 58.1
Cpa.g.sc101.41 Carica papaya HOM05D001240 ORTHO05D002450 7.1e-09 65.5 62 61.3
Prupe.2G122900 Prunus persica HOM05D001240 ORTHO05D002450 7.1e-09 65.5 101 46.5
arahy.Tifrunner.gnm1.ann1.J7EN8P Arachis hypogaea HOM05D001240 ORTHO05D002450 9.2e-09 65.1 69 53.6
Cfa011114 Carpinus fangiana HOM05D001240 ORTHO05D002450 9.2e-09 65.1 69 56.5
AUR62013696 Chenopodium quinoa HOM05D001240 ORTHO05D002450 9.2e-09 65.1 124 38.7
TAR375G0817 Trochodendron aralioides HOM05D001240 ORTHO05D002450 9.2e-09 65.1 103 45.6
Atru.chr5.188 Acer truncatum HOM05D001240 ORTHO05D002450 1.2e-08 64.7 62 59.7
A05p05070 Brassica napus HOM05D001240 ORTHO05D002450 1.2e-08 64.7 62 56.5
BraA05t19481Z Brassica rapa HOM05D001240 ORTHO05D002450 1.2e-08 64.7 62 56.5
AUR62004133 Chenopodium quinoa HOM05D001240 ORTHO05D002450 1.2e-08 64.7 100 43.0
Haze_02752 Corylus avellana HOM05D001240 ORTHO05D002450 1.2e-08 64.7 69 56.5
SalBow5G0872 Salvia bowleyana HOM05D001240 ORTHO05D002450 1.2e-08 64.7 60 65.0
CANSAT21G1530 Cannabis sativa HOM05D001240 ORTHO05D002450 1.6e-08 64.3 69 59.4
CDE09G1357 Ceratophyllum demersum HOM05D001240 ORTHO05D002450 1.6e-08 64.3 62 62.9
BcaC02g07125 Brassica carinata HOM05D001240 ORTHO05D002450 2.1e-08 63.9 62 56.5
A04p33570 Brassica napus HOM05D001240 ORTHO05D002450 2.1e-08 63.9 62 58.1
BolC4t28639H Brassica oleracea HOM05D001240 ORTHO05D002450 2.1e-08 63.9 62 56.5
BraA04t18819Z Brassica rapa HOM05D001240 ORTHO05D002450 2.1e-08 63.9 62 58.1
DCAR_015857 Daucus carota HOM05D001240 ORTHO05D002450 2.1e-08 63.9 62 58.1
Psat3g180600 Pisum sativum HOM05D001240 ORTHO05D002450 2.1e-08 63.9 62 56.5
Potri.014G055800 Populus trichocarpa HOM05D001240 ORTHO05D002450 2.1e-08 63.9 61 62.3
BcaC02g12257 Brassica carinata HOM05D001240 ORTHO05D002450 2.7e-08 63.5 62 54.8
C04p05920 Brassica napus HOM05D001240 ORTHO05D002450 2.7e-08 63.5 62 54.8
BolC4t22223H Brassica oleracea HOM05D001240 ORTHO05D002450 2.7e-08 63.5 62 54.8
Oeu051908.1 Olea europaea HOM05D001240 ORTHO05D002450 2.7e-08 63.5 62 58.1
Ah.05g173400 Amaranthus hybridus HOM05D001240 ORTHO05D002450 6.0e-08 62.4 100 40.0
Lalb_Chr03g0040151 Lupinus albus HOM05D001240 ORTHO05D002450 1.0e-07 61.6 70 57.1
Medtr7g046250 Medicago truncatula HOM05D001240 ORTHO05D002450 1.0e-07 61.6 62 54.8
Lalb_Chr19g0126661 Lupinus albus HOM05D001240 ORTHO05D002450 1.7e-07 60.8 68 54.4
Rhsim07G0033400 Rhododendron simsii HOM05D001240 ORTHO05D002450 1.7e-07 60.8 99 43.4
Solyc11g013370.3 Solanum lycopersicum HOM05D001240 ORTHO05D002450 1.7e-07 60.8 54 64.8
Sabra02G0110200 Salix brachista HOM05D001240 ORTHO05D002450 3.0e-07 60.1 100 45.0
EL10Ac1g00804 Beta vulgaris HOM05D001240 ORTHO05D002450 3.9e-07 59.7 100 41.0
Sopen11g008390 Solanum pennellii HOM05D001240 ORTHO05D002450 3.9e-07 59.7 54 64.8
Sed0002705 Sechium edule HOM05D001240 ORTHO05D002450 5.1e-07 59.3 100 43.0
Potri.002G141300 Populus trichocarpa HOM05D001240 ORTHO05D002450 8.6e-07 58.5 103 42.7
QL04p034731 Quercus lobata HOM05D001240 ORTHO05D002450 1.1e-06 58.2 54 63.0
Sed0005356 Sechium edule HOM05D001240 ORTHO05D002450 1.1e-06 58.2 62 59.7
Nitab4.5_0000051g0250 Nicotiana tabacum HOM05D001240 ORTHO05D002450 1.9e-06 57.4 54 63.0
Nitab4.5_0009626g0010 Nicotiana tabacum HOM05D001240 ORTHO05D002450 1.9e-06 57.4 54 63.0
Hund17072 Selenicereus undatus HOM05D001240 ORTHO05D002450 1.9e-06 57.4 62 53.2
PSO017G0984 Papaver somniferum HOM05D001240 ORTHO05D002450 2.5e-06 57.0 62 56.5
PSO170G3933 Papaver somniferum HOM05D001240 ORTHO05D002450 3.3e-06 56.6 62 56.5


User provided reference genes

Program Settings