Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 0.0e+00 1527.7 821 100.0
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 3.7e-282 974.9 865 65.9
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 4.3e-278 961.4 892 63.5
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 1.3e-250 870.2 886 57.3
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 2.4e-244 849.4 894 58.2
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 1.7e-242 843.2 797 59.5
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 7.1e-241 837.8 810 58.9
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 1.1e-238 830.5 789 58.6
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 5.7e-238 828.2 870 54.9
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 8.2e-237 824.3 863 54.6
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.4e-236 823.5 867 55.7
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 1.1e-233 813.9 808 55.9
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 1.4e-233 813.5 808 55.8
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 2.3e-231 806.2 851 53.7
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 2.7e-224 782.7 801 55.6
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.0e-223 780.8 864 52.1
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 5.1e-223 778.5 796 56.7
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 5.7e-222 775.0 822 55.0
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 5.7e-222 775.0 799 54.2
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 2.2e-221 773.1 800 54.4
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 2.8e-221 772.7 829 53.7
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 2.8e-221 772.7 810 54.0
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 4.8e-221 771.9 817 53.7
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 2.0e-219 766.5 807 54.9
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.5e-219 765.8 827 53.1
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 3.5e-219 765.8 912 50.4
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 5.9e-219 765.0 794 54.5
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 1.0e-218 764.2 800 53.8
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 1.3e-218 763.8 801 56.1
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 3.8e-218 762.3 814 53.9
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 3.2e-217 759.2 810 54.7
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 2.1e-216 756.5 832 52.9
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 2.1e-216 756.5 771 54.0
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 4.7e-216 755.4 802 55.7
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 6.1e-216 755.0 795 53.5
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 6.1e-216 755.0 808 54.6
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.4e-215 753.8 801 55.7
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 2.3e-215 753.1 899 50.2
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 1.1e-214 750.7 812 53.6
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 2.0e-214 750.0 804 52.0
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 2.6e-214 749.6 786 54.1
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 5.7e-214 748.4 799 52.8
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 9.7e-214 747.7 812 52.7
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 2.2e-213 746.5 794 54.4
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.2e-213 746.5 804 55.5
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 2.2e-213 746.5 814 52.6
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 4.8e-213 745.3 800 54.1
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 8.2e-213 744.6 799 53.2
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 1.1e-212 744.2 791 53.0
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 4.1e-212 742.3 806 53.0
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 2.0e-211 740.0 795 53.3
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 1.0e-210 737.6 794 52.9
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 3.8e-210 735.7 789 53.4
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 1.9e-209 733.4 800 52.8
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.9e-209 733.4 848 52.7
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 6.1e-208 728.4 792 53.2
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 2.3e-207 726.5 795 52.5
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 4.0e-207 725.7 799 53.6
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 8.8e-207 724.5 797 53.2
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 8.8e-207 724.5 797 52.9
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 8.8e-207 724.5 819 52.6
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 4.4e-206 722.2 808 52.5
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 7.5e-206 721.5 840 51.8
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 1.7e-205 720.3 791 52.5
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 2.8e-205 719.5 801 51.7
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 4.8e-205 718.8 804 52.0
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 6.3e-205 718.4 863 50.9
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 2.4e-204 716.5 787 52.1
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 7.0e-204 714.9 808 51.1
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 1.3e-202 710.7 820 50.4
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 1.9e-201 706.8 818 48.7
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 2.5e-201 706.4 797 52.3
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 6.1e-200 701.8 752 53.1
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 1.4e-199 700.7 698 54.6
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 1.8e-199 700.3 809 51.4
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 5.2e-199 698.7 809 51.3
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 1.2e-198 697.6 806 49.3
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 2.0e-198 696.8 876 49.0
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 1.4e-196 690.6 862 47.8
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 1.4e-196 690.6 806 51.6
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 1.3e-194 684.1 783 51.9
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 3.8e-194 682.6 809 50.6
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 8.3e-189 664.8 752 52.1
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 9.2e-188 661.4 804 49.6
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 5.6e-185 652.1 723 52.0
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 7.5e-182 641.7 845 46.3
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 2.7e-171 606.7 618 54.5
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 1.3e-165 587.8 694 48.6
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 1.7e-165 587.4 726 47.1
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 1.6e-163 580.9 758 45.6
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 1.3e-157 561.2 613 51.7
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 8.4e-149 531.9 600 53.0
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 4.2e-148 529.6 753 42.8
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 5.4e-148 529.3 476 58.2
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 3.9e-146 523.1 457 59.3
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 6.2e-136 489.2 412 60.4
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 3.4e-134 483.4 798 41.7
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 2.2e-133 480.7 582 47.8
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 7.2e-124 449.1 501 50.5
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 4.5e-110 403.3 418 52.9
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 5.9e-102 376.3 477 49.3
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 8.8e-98 362.5 703 35.7
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 1.6e-86 325.1 222 72.5
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 2.4e-79 301.2 607 34.1
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.1e-76 292.4 677 33.7
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 1.1e-76 292.4 732 30.5
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 3.7e-72 277.3 467 39.4
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 1.6e-67 261.9 219 64.8
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 3.6e-67 260.8 641 31.4
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 5.2e-66 256.9 347 48.4
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 4.0e-58 230.7 281 47.0
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 1.3e-56 225.7 152 72.4
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 4.9e-32 144.1 217 40.6
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 4.5e-25 120.9 162 48.1
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 2.2e-24 118.6 170 43.5
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 1.9e-23 115.5 63 82.5
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 9.3e-23 113.2 119 57.1
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 2.7e-22 111.7 156 48.7
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.0e-16 93.2 80 62.5
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 8.4e-16 90.1 137 42.3
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 8.7e-13 80.1 87 51.7
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 8.7e-13 80.1 87 51.7
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 2.9e-08 65.1 56 51.8
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 3.8e-08 64.7 145 40.0
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 4.6e-06 57.8 276 28.3


User provided reference genes

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