Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 3.2e-164 581.6 282 100.0
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 1.3e-80 303.9 216 68.5
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 4.9e-80 302.0 218 64.7
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 1.6e-78 297.0 211 68.7
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 2.0e-78 296.6 245 60.0
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 3.2e-71 272.7 217 61.3
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 2.7e-70 269.6 219 57.5
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 4.6e-70 268.9 216 58.8
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 3.9e-69 265.8 223 58.7
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 1.1e-68 264.2 215 60.0
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.9e-68 263.5 217 59.0
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 1.9e-68 263.5 216 59.3
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 4.3e-68 262.3 216 59.3
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 4.3e-68 262.3 216 59.3
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 7.3e-68 261.5 217 58.5
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 7.3e-68 261.5 215 56.7
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 1.2e-67 260.8 211 58.3
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 1.6e-67 260.4 230 53.0
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 2.1e-67 260.0 217 55.3
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 2.1e-67 260.0 216 58.8
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 6.2e-67 258.5 219 57.5
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 6.2e-67 258.5 230 53.9
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 3.1e-66 256.1 220 55.9
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 5.2e-66 255.4 221 55.7
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 5.2e-66 255.4 213 56.3
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 1.2e-65 254.2 180 66.1
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 1.2e-65 254.2 219 55.3
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 2.0e-65 253.4 233 54.9
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 4.4e-65 252.3 215 57.7
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 9.8e-65 251.1 159 68.6
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 9.8e-65 251.1 222 54.1
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 1.3e-64 250.8 206 56.8
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 1.7e-64 250.4 217 53.9
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.7e-64 250.4 216 56.9
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 2.2e-64 250.0 218 53.2
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 2.2e-64 250.0 207 57.5
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 2.2e-64 250.0 159 70.4
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 3.7e-64 249.2 205 59.5
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 4.9e-64 248.8 205 56.6
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 4.9e-64 248.8 204 59.8
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 8.3e-64 248.1 216 56.5
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.9e-63 246.9 214 58.9
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.9e-63 246.9 158 69.0
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 1.9e-63 246.9 238 50.8
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 2.4e-63 246.5 215 54.9
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 2.4e-63 246.5 224 54.5
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 3.2e-63 246.1 159 68.6
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 3.2e-63 246.1 224 54.5
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 4.1e-63 245.7 159 67.3
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 7.0e-63 245.0 217 56.2
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 7.0e-63 245.0 209 56.5
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 9.2e-63 244.6 215 54.4
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 1.2e-62 244.2 214 56.5
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 2.0e-62 243.4 232 53.4
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 2.7e-62 243.0 215 54.0
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 4.6e-62 242.3 220 55.9
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 4.6e-62 242.3 218 55.0
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 6.0e-62 241.9 168 63.1
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 3.0e-61 239.6 217 55.3
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 5.0e-61 238.8 139 74.1
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 5.0e-61 238.8 217 54.8
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 8.6e-61 238.0 208 53.8
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 1.1e-60 237.7 217 56.7
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.5e-60 237.3 218 54.6
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 1.5e-60 237.3 158 68.4
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.9e-60 236.9 221 53.4
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 4.3e-60 235.7 158 67.7
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 1.2e-59 234.2 160 64.4
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 1.6e-59 233.8 158 65.2
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 1.6e-59 233.8 205 57.6
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 2.1e-59 233.4 213 54.5
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 2.8e-59 233.0 218 52.3
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 3.6e-59 232.6 214 55.6
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 8.1e-59 231.5 210 53.3
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 2.3e-58 229.9 214 55.6
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 5.2e-58 228.8 214 56.5
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 5.2e-58 228.8 213 51.6
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 6.8e-58 228.4 253 48.2
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 1.5e-57 227.3 218 55.5
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 9.8e-57 224.6 223 49.8
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 1.4e-55 220.7 191 51.3
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 9.2e-55 218.0 216 52.8
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 1.6e-54 217.2 217 52.1
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 2.1e-54 216.9 212 50.9
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 2.1e-54 216.9 217 52.1
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 2.1e-54 216.9 216 52.3
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 2.1e-54 216.9 216 52.3
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 1.3e-53 214.2 167 59.9
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 3.0e-53 213.0 209 49.8
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 7.3e-52 208.4 191 57.1
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 8.1e-51 204.9 159 59.7
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 7.1e-47 191.8 171 52.0
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 5.6e-44 182.2 150 54.7
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 4.0e-42 176.0 143 51.0
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 9.9e-41 171.4 134 53.0
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 2.4e-39 166.8 227 39.6
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 3.5e-38 162.9 122 62.3
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 4.3e-36 156.0 140 54.3
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 2.1e-35 153.7 227 42.7
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 8.4e-32 141.7 229 34.1
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 3.9e-29 132.9 82 70.7
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 2.8e-27 126.7 141 46.8
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 3.1e-26 123.2 145 37.9
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 5.5e-23 112.5 156 39.7
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 1.6e-19 100.9 52 80.8
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.6e-14 84.3 54 70.4
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 3.7e-11 73.2 44 72.7
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 1.0e-08 65.1 102 39.2


User provided reference genes

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