Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 0.0e+00 1395.9 769 100.0
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 7.3e-280 967.2 688 74.0
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 2.2e-276 955.7 668 74.6
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 3.1e-270 935.3 689 73.6
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 4.0e-270 934.9 691 71.8
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 5.8e-269 931.0 705 69.6
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 1.4e-267 926.4 710 72.0
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 8.7e-265 917.1 678 71.7
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 3.6e-263 911.8 711 70.7
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 8.1e-263 910.6 686 70.6
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 2.9e-260 902.1 688 68.9
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 6.4e-260 901.0 695 70.8
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 8.4e-260 900.6 696 68.7
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 1.1e-259 900.2 695 70.9
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 1.6e-258 896.3 683 69.3
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 8.7e-257 890.6 692 69.5
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 9.6e-256 887.1 685 67.9
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 3.7e-255 885.2 709 66.0
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 6.2e-255 884.4 682 67.2
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 1.4e-254 883.2 683 68.5
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 9.0e-254 880.6 694 69.6
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 7.6e-253 877.5 690 65.7
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 1.3e-252 876.7 697 67.6
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 1.7e-252 876.3 700 67.4
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 1.4e-251 873.2 687 67.1
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 5.5e-251 871.3 744 65.9
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 7.1e-251 870.9 707 66.2
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 9.3e-251 870.5 695 67.2
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 1.8e-249 866.3 714 67.8
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 1.8e-249 866.3 714 67.8
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 9.6e-248 860.5 693 65.9
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 1.8e-246 856.3 677 65.9
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 2.4e-246 855.9 654 68.7
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 6.9e-246 854.4 690 65.8
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 9.0e-246 854.0 691 65.0
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 9.0e-246 854.0 691 65.0
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 1.2e-245 853.6 683 64.3
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 2.6e-245 852.4 692 66.2
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 5.9e-245 851.3 686 65.0
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 5.9e-245 851.3 683 64.4
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 1.3e-244 850.1 669 65.8
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.9e-244 849.0 691 65.1
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 3.8e-244 848.6 690 67.8
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 8.5e-244 847.4 694 64.3
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 7.2e-243 844.3 689 65.7
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 7.2e-243 844.3 699 63.4
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 1.6e-242 843.2 685 66.3
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 2.3e-241 839.3 691 66.0
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 3.0e-241 839.0 692 64.5
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 3.9e-241 838.6 702 62.8
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 6.7e-241 837.8 702 62.8
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 6.7e-241 837.8 684 63.7
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 1.1e-240 837.0 723 63.1
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 1.9e-240 836.3 700 62.7
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 4.8e-239 831.6 713 62.8
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 6.9e-238 827.8 689 63.1
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 2.0e-237 826.2 692 61.0
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 2.6e-237 825.9 690 61.9
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 1.1e-235 820.5 693 65.1
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 1.9e-235 819.7 689 63.6
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 2.5e-235 819.3 707 60.8
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 2.5e-235 819.3 689 66.2
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 3.2e-235 818.9 701 64.2
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 7.2e-235 817.8 723 60.4
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 9.4e-235 817.4 692 65.5
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 3.9e-233 812.0 733 59.8
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 5.1e-233 811.6 708 61.2
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 6.7e-233 811.2 690 61.2
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 1.5e-232 810.1 689 66.0
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 2.6e-232 809.3 690 63.2
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 5.7e-232 808.1 688 65.7
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 9.7e-232 807.4 692 65.2
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 2.8e-231 805.8 681 62.3
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 8.2e-231 804.3 688 65.3
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 1.1e-230 803.9 690 65.5
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 1.4e-230 803.5 690 65.5
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 2.6e-229 799.3 687 59.4
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 4.5e-229 798.5 692 61.8
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 2.0e-224 783.1 690 60.3
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 9.1e-222 774.2 708 59.6
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 4.5e-221 771.9 696 61.4
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 1.7e-220 770.0 706 60.6
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 2.9e-220 769.2 580 69.3
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 3.8e-220 768.8 1013 46.7
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 8.8e-217 757.7 694 60.1
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 5.7e-216 755.0 694 59.9
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 2.8e-215 752.7 690 60.1
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 2.8e-215 752.7 690 60.1
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 3.5e-213 745.7 510 72.7
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 1.0e-212 744.2 692 56.4
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 4.2e-211 738.8 719 58.1
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 1.3e-204 717.2 693 60.9
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 9.2e-198 694.5 684 52.5
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 2.3e-196 689.9 705 51.6
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 7.3e-195 684.9 510 67.3
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 2.1e-194 683.3 452 73.9
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 2.3e-193 679.9 717 51.0
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 1.7e-188 663.7 689 54.6
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 4.4e-184 649.0 544 64.5
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 1.7e-183 647.1 438 73.5
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 1.4e-182 644.0 830 46.1
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 3.2e-182 642.9 683 50.5
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 1.1e-174 617.8 669 52.3
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 4.6e-173 612.5 416 68.0
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 8.1e-162 575.1 692 50.1
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 3.5e-157 559.7 708 44.4
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 4.2e-150 536.2 556 58.6
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 3.0e-148 530.0 578 52.8
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 9.6e-147 525.0 544 52.8
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 3.1e-145 520.0 732 41.8
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 9.0e-145 518.5 707 43.3
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 8.5e-119 432.2 460 57.0
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 3.3e-115 420.2 536 42.2
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 1.7e-111 407.9 434 51.2
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 4.4e-99 366.7 412 52.9
Thecc.05G137700 Theobroma cacao HOM05D003729 ORTHO05D004384 5.5e-94 349.7 299 61.5
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-92 345.1 433 50.8
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 1.5e-83 315.1 374 53.7
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 1.6e-80 305.1 218 70.2
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 1.1e-78 298.9 649 32.7
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 7.3e-78 296.2 276 56.5
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 3.3e-70 270.8 658 34.0
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 2.8e-69 267.7 364 47.8
Cpa.g.sc5.183 Carica papaya HOM05D003729 ORTHO05D004384 8.9e-68 262.7 255 55.3
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 2.8e-61 241.1 240 53.3
vmacro10989 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 3.6e-61 240.7 262 53.1
Cpa.g.sc1212.1 Carica papaya HOM05D003729 ORTHO05D004384 1.1e-57 229.2 140 77.9
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 5.6e-54 216.9 259 53.7
SHI46975 Sapria himalayana HOM05D003729 ORTHO05D004384 2.1e-53 214.9 207 55.6
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 2.8e-53 214.5 273 59.7
Thecc.05G138100 Theobroma cacao HOM05D003729 ORTHO05D004384 1.2e-51 209.1 130 76.9
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 2.0e-51 208.4 260 58.8
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 9.2e-49 199.5 260 57.3
HanXRQChr09g0238921 Helianthus annuus HOM05D003729 ORTHO05D004384 1.4e-44 185.7 107 79.4
Haze_16233 Corylus avellana HOM05D003729 ORTHO05D004384 3.3e-38 164.5 119 69.7
SEGI_35907 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 6.2e-37 160.2 119 63.9
AUR62022314 Chenopodium quinoa HOM05D000534 ORTHO05D000389 2.4e-36 158.3 150 56.7
Haze_16231 Corylus avellana HOM05D003729 ORTHO05D004384 1.7e-34 152.1 175 48.6
QL07p009838 Quercus lobata HOM05D003729 ORTHO05D004384 2.9e-34 151.4 120 64.2
Haze_20209 Corylus avellana HOM05D003729 ORTHO05D004384 1.6e-32 145.6 101 68.3
arahy.Tifrunner.gnm1.ann1.7FD8QN Arachis hypogaea HOM05D003729 ORTHO05D004384 2.1e-32 145.2 207 43.5
Haze_20213 Corylus avellana HOM05D003729 ORTHO05D004384 4.6e-32 144.1 101 67.3
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 4.6e-32 144.1 255 47.8
SHI49287 Sapria himalayana HOM05D003729 ORTHO05D004384 1.8e-31 142.1 105 64.8
Gohir.A07G111501 Gossypium hirsutum HOM05D003729 ORTHO05D004384 3.0e-31 141.4 86 76.7
Gohir.D02G195125 Gossypium hirsutum HOM05D003729 ORTHO05D004384 3.0e-31 141.4 86 76.7
Gohir.D06G065600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 3.0e-31 141.4 86 76.7
Gorai.004G004200 Gossypium raimondii HOM05D003729 ORTHO05D004384 3.9e-31 141.0 103 69.9
Glyma.03G135700 Glycine max HOM05D003729 ORTHO05D004384 1.1e-30 139.4 207 38.2
Zm00001eb034510 Zea mays HOM05D003729 ORTHO05D004384 1.9e-30 138.7 106 63.2
Gohir.D05G190600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 2.5e-30 138.3 85 75.3
SHI44105 Sapria himalayana HOM05D003729 ORTHO05D004384 9.6e-30 136.3 107 57.9
SHI46293 Sapria himalayana HOM05D003729 ORTHO05D004384 1.3e-26 125.9 70 78.6
vmacro12362 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.7e-26 125.6 77 74.0
Haze_16230 Corylus avellana HOM05D003729 ORTHO05D004384 1.2e-24 119.4 77 70.1
SHI45328 Sapria himalayana HOM05D003729 ORTHO05D004384 1.0e-23 116.3 64 78.1
Haze_16235 Corylus avellana HOM05D003729 ORTHO05D004384 1.3e-21 109.4 106 55.7
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 1.6e-21 109.0 162 46.3
Zm00001eb284510 Zea mays HOM05D001162 ORTHO05D001218 1.2e-19 102.8 56 80.4
Zm00001eb077600 Zea mays HOM05D001162 ORTHO05D029047 2.6e-19 101.7 55 80.0
Zm00001eb173210 Zea mays HOM05D001162 ORTHO05D001218 2.6e-19 101.7 56 78.6
Sabra16G0029600 Salix brachista HOM05D000075 ORTHO05D000073 1.7e-18 99.0 88 59.1
SHI50183 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-18 99.0 95 53.7
Cpa.g.sc5.181 Carica papaya HOM05D003729 ORTHO05D004384 1.1e-17 96.3 56 78.6
SHI38377 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-17 96.3 60 71.7
SHI53576 Sapria himalayana HOM05D003729 ORTHO05D004384 5.5e-17 94.0 60 71.7
SHI46294 Sapria himalayana HOM05D003729 ORTHO05D004384 1.2e-16 92.8 64 65.6
SHI51948 Sapria himalayana HOM05D003729 ORTHO05D004384 1.0e-15 89.7 186 45.2
FvH4_3g33711 Fragaria vesca HOM05D003729 ORTHO05D001837 1.1e-14 86.3 98 46.9
Haze_20208 Corylus avellana HOM05D003729 ORTHO05D004384 2.5e-14 85.1 55 67.3
Sabra16G0039200 Salix brachista HOM05D002722 ORTHO05D003076 3.3e-14 84.7 77 57.1
SHI49946 Sapria himalayana HOM05D003729 ORTHO05D004384 6.3e-13 80.5 109 42.2
SHI45329 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-12 79.7 47 74.5
QL01p046327 Quercus lobata HOM05D003729 ORTHO05D004384 1.8e-12 79.0 53 66.0
QL93p0119_0007 Quercus lobata HOM05D003729 ORTHO05D004384 1.8e-12 79.0 53 66.0
SHI48245 Sapria himalayana HOM05D003729 ORTHO05D004384 3.1e-12 78.2 63 60.3
Medtr8g007595 Medicago truncatula HOM05D003729 ORTHO05D004384 5.3e-12 77.4 48 72.9
Sabra16G0022500 Salix brachista HOM05D000075 ORTHO05D000073 5.9e-11 73.9 57 64.9
SHI48244 Sapria himalayana HOM05D003729 ORTHO05D004384 1.9e-09 68.9 51 62.7
Sabra16G0044400 Salix brachista HOM05D002722 ORTHO05D003076 2.5e-09 68.6 77 49.4
SHI50413 Sapria himalayana HOM05D003729 ORTHO05D004384 2.5e-09 68.6 195 34.9
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 9.4e-09 66.6 101 50.5
Sabra06G0025400 Salix brachista HOM05D003729 ORTHO05D004384 2.7e-08 65.1 34 73.5
SHI40171 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-07 62.8 76 48.7
SHI44104 Sapria himalayana HOM05D003729 ORTHO05D004384 5.1e-07 60.8 243 35.0
Medtr8g007590 Medicago truncatula HOM05D003729 ORTHO05D004384 1.1e-06 59.7 47 53.2


User provided reference genes

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