Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 5.4e-133 477.6 234 100.0
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 8.4e-94 347.4 241 72.2
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 4.7e-89 331.6 210 76.7
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 3.8e-86 322.0 224 73.2
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 4.3e-82 308.5 227 70.0
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 1.3e-81 307.0 244 66.8
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 8.1e-81 304.3 246 65.4
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.8e-80 303.1 164 87.2
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.8e-80 303.1 240 64.6
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 2.4e-80 302.8 246 65.4
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 5.3e-80 301.6 225 68.9
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 6.9e-80 301.2 225 68.9
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 6.9e-80 301.2 223 68.2
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 9.0e-80 300.8 246 63.4
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.5e-79 300.1 226 69.0
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 2.0e-79 299.7 253 62.1
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 2.0e-79 299.7 232 64.2
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 2.6e-79 299.3 240 65.0
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 3.4e-79 298.9 244 63.9
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 4.5e-79 298.5 235 65.5
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.5e-79 298.5 215 68.8
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.5e-79 298.5 215 68.8
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 9.9e-79 297.4 244 66.4
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.3e-78 297.0 164 84.8
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 1.3e-78 297.0 236 65.3
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 1.3e-78 297.0 250 62.4
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 1.7e-78 296.6 164 84.8
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 1.7e-78 296.6 232 67.2
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.2e-78 296.2 180 78.9
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 2.2e-78 296.2 221 68.3
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 2.2e-78 296.2 245 66.1
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 3.8e-78 295.4 240 65.8
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 4.9e-78 295.0 239 65.7
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 4.9e-78 295.0 228 67.5
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 4.9e-78 295.0 164 84.1
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 1.1e-77 293.9 164 84.8
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 1.4e-77 293.5 211 70.1
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 1.4e-77 293.5 178 78.1
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.4e-77 293.5 173 80.9
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.9e-77 293.1 189 74.1
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 2.4e-77 292.7 224 67.9
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 3.2e-77 292.4 262 58.8
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 3.2e-77 292.4 230 65.2
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 9.3e-77 290.8 251 64.1
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 1.2e-76 290.4 215 67.9
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 2.1e-76 289.7 226 64.2
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 6.0e-76 288.1 229 64.6
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 6.0e-76 288.1 228 67.1
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 7.9e-76 287.7 240 63.3
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 1.3e-75 287.0 164 81.7
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.3e-75 287.0 164 81.7
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.8e-75 286.6 246 61.4
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 1.8e-75 286.6 180 76.7
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 2.3e-75 286.2 176 75.6
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 5.1e-75 285.0 164 79.3
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 6.7e-75 284.6 227 64.8
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 1.1e-74 283.9 166 79.5
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 1.1e-74 283.9 229 65.1
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.9e-74 283.1 164 81.1
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 3.3e-74 282.3 219 66.2
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 5.6e-74 281.6 164 79.9
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 6.2e-73 278.1 154 84.4
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 1.1e-72 277.3 233 60.9
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.4e-72 276.9 223 63.2
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.8e-72 276.6 164 78.7
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 2.4e-72 276.2 164 77.4
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 4.0e-72 275.4 164 79.3
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 5.3e-72 275.0 183 73.8
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 5.3e-72 275.0 183 73.8
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 9.0e-72 274.2 248 58.5
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 2.6e-71 272.7 244 59.4
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.6e-71 272.7 179 74.3
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 3.4e-71 272.3 226 62.4
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 3.4e-71 272.3 226 62.4
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 3.4e-71 272.3 226 62.4
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 3.4e-71 272.3 240 60.0
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 5.8e-71 271.6 235 60.0
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 2.2e-70 269.6 165 77.6
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 2.9e-70 269.2 234 59.0
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 3.8e-70 268.9 231 61.5
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 6.4e-70 268.1 230 60.0
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 1.4e-69 266.9 233 58.4
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 2.4e-69 266.2 223 61.4
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 3.2e-69 265.8 173 71.7
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.6e-68 263.5 161 76.4
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 3.5e-68 262.3 232 60.8
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 1.3e-67 260.4 176 72.2
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 4.3e-66 255.4 160 75.6
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.4e-64 249.6 187 67.9
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 2.2e-62 243.0 258 53.5
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 3.8e-62 242.3 177 65.0
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 1.9e-61 240.0 191 62.3
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.6e-60 236.9 164 71.3
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 2.7e-60 236.1 163 66.3
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.0e-59 234.2 175 62.3
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 1.1e-58 230.7 234 57.7
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 2.1e-57 226.5 204 56.9
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 4.5e-55 218.8 131 77.1
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 7.6e-55 218.0 234 55.6
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 4.6e-52 208.8 126 76.2
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 8.7e-51 204.5 199 60.8
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 2.8e-49 199.5 230 52.2
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 6.9e-48 194.9 116 79.3
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 1.7e-46 190.3 109 82.6
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 3.0e-43 179.5 113 73.5
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 7.4e-42 174.9 113 71.7
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 9.7e-42 174.5 113 71.7
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.1e-40 171.0 182 50.0
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.5e-39 167.2 141 66.0
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 1.0e-38 164.5 178 47.2
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 1.7e-38 163.7 106 76.4
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.1e-37 161.0 120 66.7
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 8.8e-35 151.4 109 66.1
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.5e-21 107.5 159 38.4
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 5.4e-16 89.0 48 85.4
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 8.6e-14 81.6 53 71.7
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 1.9e-13 80.5 186 28.0
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 9.5e-13 78.2 209 26.3
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 1.8e-11 73.9 167 26.9
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 2.2e-09 67.0 67 50.7
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 4.5e-07 59.3 60 53.3


User provided reference genes

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