Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 1.9e-87 325.9 170 100.0
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 9.9e-28 127.5 174 48.9
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 1.0e-24 117.5 158 44.9
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 8.4e-19 97.8 152 45.4
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 6.0e-17 91.7 172 36.6
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 5.1e-16 88.6 166 41.0
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 4.8e-14 82.0 169 40.8
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 1.4e-13 80.5 166 36.1
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 2.6e-12 76.3 111 48.6
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 5.8e-12 75.1 165 33.3
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 1.7e-11 73.6 146 37.7
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 1.7e-11 73.6 168 38.7
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 2.9e-11 72.8 162 34.0
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 2.9e-11 72.8 168 38.7
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 2.9e-11 72.8 166 32.5
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 3.8e-11 72.4 146 37.0
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 8.4e-11 71.2 173 34.1
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 8.4e-11 71.2 99 48.5
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 1.1e-10 70.9 144 36.8
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 1.4e-10 70.5 155 32.3
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 1.9e-10 70.1 152 35.5
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 2.4e-10 69.7 173 32.9
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 2.4e-10 69.7 99 49.5
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 7.1e-10 68.2 128 35.9
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 9.3e-10 67.8 170 33.5
Nitab4.5_0010499g0010 Nicotiana tabacum HOM05D008192 ORTHO05D010301 1.6e-09 67.0 153 36.6
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 2.1e-09 66.6 162 30.9
arahy.Tifrunner.gnm1.ann1.D8U9UB Arachis hypogaea HOM05D008192 ORTHO05D010301 2.7e-09 66.2 163 33.7
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 3.5e-09 65.9 150 32.0
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 3.5e-09 65.9 176 31.2
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 3.5e-09 65.9 176 31.2
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 3.5e-09 65.9 152 34.9
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 1.0e-08 64.3 107 41.1
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 1.0e-08 64.3 168 30.4
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 1.3e-08 63.9 102 41.2
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 1.8e-08 63.5 160 31.9
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.3e-08 63.2 166 31.3
Potri.006G264900 Populus trichocarpa HOM05D008192 ORTHO05D010301 5.1e-08 62.0 86 46.5
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 6.7e-08 61.6 112 37.5
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 6.7e-08 61.6 154 33.8
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 8.7e-08 61.2 79 44.3
arahy.Tifrunner.gnm1.ann1.XVGB1U Arachis hypogaea HOM05D008192 ORTHO05D010301 1.1e-07 60.8 186 30.6
EL10Ac2g02493 Beta vulgaris HOM05D008192 ORTHO05D010301 1.9e-07 60.1 154 29.2
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 1.9e-07 60.1 157 29.9
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 1.9e-07 60.1 90 41.1
CAN.G1198.1 Capsicum annuum HOM05D008192 ORTHO05D010301 2.5e-07 59.7 112 36.6
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.5e-07 59.7 73 42.5
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 2.5e-07 59.7 73 42.5
PGSC0003DMG400026278 Solanum tuberosum HOM05D008192 ORTHO05D010301 2.5e-07 59.7 86 43.0
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 4.3e-07 58.9 111 39.6
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 5.6e-07 58.5 70 42.9
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 5.6e-07 58.5 88 39.8
VMungo0647G0321 Vigna mungo HOM05D008192 ORTHO05D010301 7.4e-07 58.2 138 31.2
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 9.6e-07 57.8 80 46.2
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 1.3e-06 57.4 135 35.6
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 1.6e-06 57.0 165 29.1
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 1.6e-06 57.0 60 58.3
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 2.1e-06 56.6 58 53.4
Sopen08g002700 Solanum pennellii HOM05D008192 ORTHO05D010301 2.8e-06 56.2 172 32.0
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 4.8e-06 55.5 178 30.9
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 6.2e-06 55.1 171 30.4
Peaxi162Scf01286g00122 Petunia axillaris HOM05D008192 ORTHO05D010301 8.1e-06 54.7 135 35.6


User provided reference genes

Program Settings