Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold144G35850 Striga asiatica HOM05D002129 ORTHO05D002188 0.0e+00 1850.1 1956 100.0
SGA_v2.0_scaffold111G31429 Striga asiatica HOM05D002129 ORTHO05D002188 2.0e-95 355.9 300 72.0
SalBow8G2059 Salvia bowleyana HOM05D002129 ORTHO05D002188 8.9e-72 277.3 1987 47.9
Migut.E01236 Erythranthe guttata HOM05D002129 ORTHO05D002188 4.6e-68 265.0 1992 40.9
Oeu009945.1 Olea europaea HOM05D002129 ORTHO05D002188 6.2e-65 254.6 1960 31.6
Oeu042387.1 Olea europaea HOM05D002129 ORTHO05D002188 4.4e-63 248.4 1959 33.1
MSTRG.25657 Avicennia marina HOM05D002129 ORTHO05D002188 1.9e-53 216.5 293 48.5
unitig_52.g17439 Utricularia gibba HOM05D002129 ORTHO05D002188 1.2e-52 213.8 835 31.5
Actinidia27335 Actinidia chinensis HOM05D002129 ORTHO05D002188 1.1e-48 200.7 288 49.7
arahy.Tifrunner.gnm1.ann1.DN0YA4 Arachis hypogaea HOM05D002129 ORTHO05D002188 7.6e-47 194.5 316 44.0
Dinv37550 Davidia involucrata HOM05D002129 ORTHO05D002188 1.7e-43 183.3 479 34.0
Nitab4.5_0000223g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 8.7e-43 181.0 488 35.7
Manes.01G045900 Manihot esculenta HOM05D002129 ORTHO05D002188 1.6e-41 176.8 277 46.6
arahy.Tifrunner.gnm1.ann1.Q3GPI2 Arachis hypogaea HOM05D002129 ORTHO05D002188 2.1e-41 176.4 291 44.0
Eucgr.E00844 Eucalyptus grandis HOM05D002129 ORTHO05D002188 1.2e-39 170.6 285 43.5
Duzib205G0555 Durio zibethinus HOM05D002129 ORTHO05D002188 1.7e-38 166.8 248 46.8
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 2.2e-38 166.4 849 41.9
Gohir.A02G102200 Gossypium hirsutum HOM05D002129 ORTHO05D002188 6.4e-38 164.9 246 45.1
Manes.10G064266 Manihot esculenta HOM05D002129 ORTHO05D002188 8.4e-38 164.5 277 46.2
Cc08_g15780 Coffea canephora HOM05D002129 ORTHO05D002188 1.9e-37 163.3 211 52.6
Glyma.05G215100 Glycine max HOM05D002129 ORTHO05D002188 2.4e-37 162.9 312 43.3
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 2.4e-37 162.9 228 46.5
COL.COLO4_21718 Corchorus olitorius HOM05D002129 ORTHO05D002188 5.4e-37 161.8 232 47.4
Nitab4.5_0004161g0030 Nicotiana tabacum HOM05D002129 ORTHO05D002188 5.4e-37 161.8 208 55.3
Gohir.D03G081900 Gossypium hirsutum HOM05D002129 ORTHO05D002188 1.2e-36 160.6 212 49.1
Gorai.003G081700 Gossypium raimondii HOM05D002129 ORTHO05D002188 1.6e-36 160.2 246 45.1
TAR374G0929 Trochodendron aralioides HOM05D002129 ORTHO05D002188 1.6e-36 160.2 302 42.4
TWI60G1278 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 6.0e-36 158.3 530 31.3
Duzib068G1418 Durio zibethinus HOM05D002129 ORTHO05D002188 2.3e-35 156.4 271 42.1
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 2.3e-35 156.4 218 49.5
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 3.9e-35 155.6 218 49.5
RcHm_v2.0_Chr7g0195431 Rosa chinensis HOM05D002129 ORTHO05D002188 8.7e-35 154.5 204 52.5
vmacro13912 Vaccinium macrocarpon HOM05D002129 ORTHO05D002188 1.9e-34 153.3 183 47.5
Gohir.A09G190800 Gossypium hirsutum HOM05D002129 ORTHO05D002188 3.3e-34 152.5 215 48.8
VMungo0251G1428 Vigna mungo HOM05D002129 ORTHO05D002188 3.3e-34 152.5 312 39.4
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 7.3e-34 151.4 219 49.3
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 1.3e-33 150.6 200 53.5
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 1.6e-33 150.2 276 41.3
Ca_17495_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 2.1e-33 149.8 281 42.0
Peaxi162Scf00074g01134 Petunia axillaris HOM05D002129 ORTHO05D002188 2.1e-33 149.8 333 51.4
Manes.02G012600 Manihot esculenta HOM05D002129 ORTHO05D002188 8.1e-33 147.9 192 50.0
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 1.1e-32 147.5 183 50.8
CAN.G532.94 Capsicum annuum HOM05D002129 ORTHO05D002188 1.4e-32 147.1 333 50.8
Potri.001G094200 Populus trichocarpa HOM05D002129 ORTHO05D002188 1.4e-32 147.1 239 45.2
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 1.8e-32 146.7 270 41.1
Migut.A00678 Erythranthe guttata HOM05D002129 ORTHO05D002188 1.8e-32 146.7 235 41.3
Glyma.08G021400 Glycine max HOM05D002129 ORTHO05D002188 1.2e-31 144.1 444 33.6
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 1.5e-31 143.7 183 47.0
MSTRG.1816 Avicennia marina HOM05D002129 ORTHO05D002188 2.0e-31 143.3 532 40.0
Lalb_Chr16g0390551 Lupinus albus HOM05D002129 ORTHO05D002188 2.0e-31 143.3 288 37.2
Solyc08g082010.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 2.6e-31 142.9 495 36.4
DCAR_005027 Daucus carota HOM05D002129 ORTHO05D002188 3.4e-31 142.5 697 33.9
FvH4_5g04072 Fragaria vesca HOM05D002129 ORTHO05D002188 3.4e-31 142.5 541 29.2
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 4.5e-31 142.1 541 32.0
PGSC0003DMG400012303 Solanum tuberosum HOM05D002129 ORTHO05D002188 7.6e-31 141.4 232 40.5
MD14G1121500 Malus domestica HOM05D002129 ORTHO05D002188 9.9e-31 141.0 543 28.9
Medtr8g099275 Medicago truncatula HOM05D002129 ORTHO05D002188 9.9e-31 141.0 286 39.2
FAN18G3989 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.2e-30 139.8 555 28.1
Phvul.002G296300 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 2.4e-29 136.3 228 44.7
Carub.0007s3359 Capsella rubella HOM05D002129 ORTHO05D002188 3.2e-29 136.0 306 39.5
Potri.003G137400 Populus trichocarpa HOM05D002129 ORTHO05D002188 3.2e-29 136.0 224 43.8
SalBow1G3214 Salvia bowleyana HOM05D002129 ORTHO05D002188 7.1e-29 134.8 240 44.2
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 9.3e-29 134.4 206 46.6
FAN08G2643 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.2e-28 134.0 530 30.2
FAN04G1700 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.1e-28 133.3 304 37.2
FAN04G3154 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.1e-28 133.3 304 37.2
AT5G41790 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 3.5e-28 132.5 304 38.5
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 2.3e-27 129.8 547 35.8
ECA233G6022 Erigeron canadensis HOM05D002129 ORTHO05D002188 3.9e-27 129.0 229 43.2
Lalb_Chr05g0224241 Lupinus albus HOM05D002129 ORTHO05D002188 3.9e-27 129.0 204 39.7
Duzib084G0477 Durio zibethinus HOM05D002129 ORTHO05D002188 6.7e-27 128.3 202 45.0
TPR.G3412 Trifolium pratense HOM05D002129 ORTHO05D002188 1.1e-26 127.5 209 43.1
Lsat_1_v5_gn_6_12040 Lactuca sativa HOM05D002129 ORTHO05D002188 3.3e-26 125.9 225 40.9
CiPaw.12G085000 Carya illinoinensis HOM05D002129 ORTHO05D002188 4.3e-26 125.6 179 46.9
Atru.chr9.2042 Acer truncatum HOM05D002129 ORTHO05D002188 9.6e-26 124.4 157 51.6
AL7G47470 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 4.8e-25 122.1 311 37.6
PGR042G1587 Punica granatum HOM05D002129 ORTHO05D002188 4.8e-25 122.1 281 37.7
Sp7g00300 Schrenkiella parvula HOM05D002129 ORTHO05D002188 5.3e-24 118.6 227 42.3
Sabra03G0098900 Salix brachista HOM05D002129 ORTHO05D002188 2.6e-23 116.3 244 38.5
THA.LOC104809341 Tarenaya hassleriana HOM05D002129 ORTHO05D002188 3.4e-23 115.9 183 49.7
BraA04t17139Z Brassica rapa HOM05D002129 ORTHO05D002188 1.3e-22 114.0 270 38.5
BcaB06g27672 Brassica carinata HOM05D002129 ORTHO05D002188 2.2e-22 113.2 227 43.6
CAN.G825.42 Capsicum annuum HOM05D002129 ORTHO05D002188 2.2e-22 113.2 192 38.0
AL2G10610 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 2.9e-22 112.8 304 36.5
GSVIVG01019499001 Vitis vinifera HOM05D002129 ORTHO05D002188 2.9e-22 112.8 283 33.6
BcaC02g08917 Brassica carinata HOM05D002129 ORTHO05D002188 6.4e-22 111.7 227 39.6
C04p49150 Brassica napus HOM05D002129 ORTHO05D002188 6.4e-22 111.7 227 39.6
BolC4t26499H Brassica oleracea HOM05D002129 ORTHO05D002188 6.4e-22 111.7 227 39.6
Migut.N02095 Erythranthe guttata HOM05D002129 ORTHO05D002188 6.4e-22 111.7 271 32.1
Aqoxy5G04152 Aquilegia oxysepala HOM05D002129 ORTHO05D002188 8.4e-22 111.3 324 40.1
Carub.0007s3367 Capsella rubella HOM05D002129 ORTHO05D021914 8.4e-22 111.3 287 36.9
CANSAT21G2383 Cannabis sativa HOM05D002129 ORTHO05D002188 3.2e-21 109.4 184 44.6
Lalb_Chr09g0332631 Lupinus albus HOM05D002129 ORTHO05D002188 4.2e-21 109.0 442 29.0
ECA240G2507 Erigeron canadensis HOM05D002129 ORTHO05D002188 7.1e-21 108.2 224 39.7
unitig_62.g23616 Utricularia gibba HOM05D002129 ORTHO05D002188 9.3e-21 107.8 232 31.5
Psat7g027680 Pisum sativum HOM05D002129 ORTHO05D002188 1.2e-20 107.5 212 42.0
CiPaw.11G123900 Carya illinoinensis HOM05D002129 ORTHO05D002188 2.1e-20 106.7 275 32.0
Sp2g00430 Schrenkiella parvula HOM05D002129 ORTHO05D002188 2.1e-20 106.7 205 42.9
A04p14960 Brassica napus HOM05D002129 ORTHO05D002188 3.5e-20 105.9 227 40.5
arahy.Tifrunner.gnm1.ann1.F3VNHJ Arachis hypogaea HOM05D002129 ORTHO05D002188 4.6e-20 105.5 150 42.7
arahy.Tifrunner.gnm1.ann1.P7UIV5 Arachis hypogaea HOM05D002129 ORTHO05D002188 4.6e-20 105.5 150 42.7
CSS0027740 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 7.9e-20 104.8 247 33.2
Dinv38857 Davidia involucrata HOM05D002129 ORTHO05D002188 1.3e-19 104.0 302 31.5
Thhalv10023387m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 1.3e-19 104.0 220 41.4
HanXRQChr03g0085141 Helianthus annuus HOM05D002129 ORTHO05D002188 1.3e-19 104.0 271 35.1
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 2.3e-19 103.2 305 31.5
Actinidia27334 Actinidia chinensis HOM05D002129 ORTHO05D002188 3.0e-19 102.8 151 58.9
ClCG07G014890 Citrullus lanatus HOM05D002129 ORTHO05D002188 5.1e-19 102.1 234 41.0
AUR62010809 Chenopodium quinoa HOM05D002129 ORTHO05D002188 8.7e-19 101.3 184 36.4
CSS0018198 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.1e-18 100.9 247 32.4
FAN18G4528 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.5e-18 100.5 523 26.4
AUR62019808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 3.3e-18 99.4 182 35.7
Aa31LG9G340 Aethionema arabicum HOM05D002129 ORTHO05D002188 7.4e-18 98.2 276 35.1
Carub.0002s0048 Capsella rubella HOM05D002129 ORTHO05D002188 1.3e-17 97.4 190 43.7
Oeu061087.1 Olea europaea HOM05D002129 ORTHO05D002188 2.1e-17 96.7 318 36.8
A09p14790 Brassica napus HOM05D002129 ORTHO05D002188 4.8e-17 95.5 262 37.0
C09p17910 Brassica napus HOM05D002129 ORTHO05D002188 4.8e-17 95.5 262 36.6
BolC9t54688H Brassica oleracea HOM05D002129 ORTHO05D002188 4.8e-17 95.5 262 36.6
CsaV3_4G006420 Cucumis sativus L. HOM05D002129 ORTHO05D002188 4.8e-17 95.5 335 33.1
Lsat_1_v5_gn_6_85821 Lactuca sativa HOM05D002129 ORTHO05D002188 1.1e-16 94.4 215 39.5
Cpa.g.sc79.65 Carica papaya HOM05D002129 ORTHO05D002188 1.8e-16 93.6 189 43.4
Sabra01G0070100 Salix brachista HOM05D002129 ORTHO05D002188 2.4e-16 93.2 216 38.0
SGA_v2.0_scaffold96G28980 Striga asiatica HOM05D002129 ORTHO05D002188 3.1e-16 92.8 243 34.6
BcaB07g31455 Brassica carinata HOM05D002129 ORTHO05D002188 4.0e-16 92.4 235 37.9
Thecc.03G293100 Theobroma cacao HOM05D002129 ORTHO05D002188 4.0e-16 92.4 284 31.0
Prupe.5G115300 Prunus persica HOM05D002129 ORTHO05D002188 5.3e-16 92.0 334 33.5
BcaC04g22559 Brassica carinata HOM05D002129 ORTHO05D002188 6.9e-16 91.7 262 36.3
HanXRQChr02g0048241 Helianthus annuus HOM05D002129 ORTHO05D002188 6.9e-16 91.7 179 39.1
Actinidia01396 Actinidia chinensis HOM05D002129 ORTHO05D002188 9.0e-16 91.3 286 31.1
MELO3C016308.2 Cucumis melo HOM05D002129 ORTHO05D002188 1.2e-15 90.9 328 30.5
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 2.6e-15 89.7 236 33.5
CARHR212780 Cardamine hirsuta HOM05D002129 ORTHO05D002188 5.8e-15 88.6 185 42.7
Rhsim02G0241100 Rhododendron simsii HOM05D002129 ORTHO05D002188 1.3e-14 87.4 176 34.7
CSS0047098 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 2.9e-14 86.3 258 30.6
Duzib068G0910 Durio zibethinus HOM05D002129 ORTHO05D002188 3.8e-14 85.9 284 29.9
CSS0015477 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 4.9e-14 85.5 256 31.2
Duzib084G0891 Durio zibethinus HOM05D002129 ORTHO05D002188 1.4e-13 84.0 197 33.0
Sc07g0009950 Simmondsia chinensis HOM05D002129 ORTHO05D002188 2.5e-13 83.2 303 28.4
Actinidia22719 Actinidia chinensis HOM05D002129 ORTHO05D002188 3.2e-13 82.8 223 34.1
AT1G64330 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 4.2e-13 82.4 186 42.5
MD14G1121400 Malus domestica HOM05D002129 ORTHO05D002188 9.3e-13 81.3 318 29.6
C06p20190 Brassica napus HOM05D001971 ORTHO05D002188 1.2e-12 80.9 274 34.3
Oeu061086.1 Olea europaea HOM05D002129 ORTHO05D002188 1.2e-12 80.9 306 27.5
Actinidia04212 Actinidia chinensis HOM05D002129 ORTHO05D002188 1.0e-11 77.8 100 43.0
MD06G1102200 Malus domestica HOM05D002129 ORTHO05D002188 1.0e-11 77.8 306 30.1
TWI15G0725 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 1.0e-11 77.8 249 31.7
PSO135G0315 Papaver somniferum HOM05D031015 ORTHO05D002188 1.8e-11 77.0 520 35.8
PSO170G1432 Papaver somniferum HOM05D031015 ORTHO05D002188 5.1e-11 75.5 181 42.0
PGSC0003DMG400004988 Solanum tuberosum HOM05D002129 ORTHO05D002188 2.5e-10 73.2 100 41.0
Solyc12g056060.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 3.3e-10 72.8 100 40.0
CARHR046630 Cardamine hirsuta HOM05D002129 ORTHO05D002188 5.7e-10 72.0 261 32.6
PSO384G3006 Papaver somniferum HOM05D031015 ORTHO05D002188 5.7e-10 72.0 178 42.1
BolC6t37203H Brassica oleracea HOM05D002129 ORTHO05D002188 7.4e-10 71.6 255 32.2
Thhalv10027620m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 7.4e-10 71.6 207 37.2
Peaxi162Scf00117g00131 Petunia axillaris HOM05D002129 ORTHO05D002188 9.7e-10 71.2 289 27.3
QL02p031447 Quercus lobata HOM05D002129 ORTHO05D002188 9.7e-10 71.2 240 28.3
Gohir.D08G132401 Gossypium hirsutum HOM05D002129 ORTHO05D002188 2.2e-09 70.1 266 27.1
Gorai.004G135400 Gossypium raimondii HOM05D002129 ORTHO05D002188 2.2e-09 70.1 266 27.4
TAR374G1003 Trochodendron aralioides HOM05D002129 ORTHO05D002188 2.8e-09 69.7 234 31.2
EL10Ac5g12884 Beta vulgaris HOM05D002129 ORTHO05D002188 3.7e-09 69.3 163 39.3
Migut.E01235 Erythranthe guttata HOM05D002129 ORTHO05D002188 3.7e-09 69.3 300 30.7
Ah.07g197190 Amaranthus hybridus HOM05D002129 ORTHO05D002188 4.8e-09 68.9 324 28.4
CAN.G26.3 Capsicum annuum HOM05D002129 ORTHO05D002188 8.2e-09 68.2 307 25.4
Potri.003G137300 Populus trichocarpa HOM05D002129 ORTHO05D002188 8.2e-09 68.2 312 25.6
Dinv37551 Davidia involucrata HOM05D002129 ORTHO05D002188 1.1e-08 67.8 258 26.4
QL12p009828 Quercus lobata HOM05D002129 ORTHO05D002188 1.1e-08 67.8 285 27.0
QL12p010595 Quercus lobata HOM05D002129 ORTHO05D002188 1.1e-08 67.8 285 27.0
Ca_17494_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 1.8e-08 67.0 229 35.8
Sc07g0009960 Simmondsia chinensis HOM05D002129 ORTHO05D002188 3.1e-08 66.2 314 28.7
Ah.12g052300 Amaranthus hybridus HOM05D002129 ORTHO05D002188 4.1e-08 65.9 103 34.0
CANSAT21G0822 Cannabis sativa HOM05D002129 ORTHO05D002188 4.1e-08 65.9 312 27.6
Nitab4.5_0002213g0050 Nicotiana tabacum HOM05D002129 ORTHO05D002188 5.3e-08 65.5 81 42.0
COL.COLO4_21719 Corchorus olitorius HOM05D002129 ORTHO05D002188 1.5e-07 63.9 286 29.0
Ca_24520_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 2.6e-07 63.2 91 42.9
Gohir.A08G099784 Gossypium hirsutum HOM05D002129 ORTHO05D002188 3.4e-07 62.8 314 24.8
Nitab4.5_0005112g0010 Nicotiana tabacum HOM05D002129 ORTHO05D002188 4.5e-07 62.4 272 26.5
Sp2g00440 Schrenkiella parvula HOM05D002129 ORTHO05D002188 1.3e-06 60.8 159 29.6
AUR62010808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 1.7e-06 60.5 274 24.5
LjContig00312_ERROPOS870357g0010036 Lotus japonicus HOM05D002129 ORTHO05D002188 2.2e-06 60.1 79 40.5
Lalb_Chr05g0224251 Lupinus albus HOM05D002129 ORTHO05D002188 2.2e-06 60.1 92 43.5
MBI07_g09922_MAGBIO Magnolia biondii HOM05D002129 ORTHO05D002188 2.9e-06 59.7 355 29.3
Lalb_Chr16g0376981 Lupinus albus HOM05D002129 ORTHO05D002188 3.8e-06 59.3 275 27.3
Oeu042385.1 Olea europaea HOM05D002129 ORTHO05D002188 8.5e-06 58.2 186 28.0
Sopen12g028580 Solanum pennellii HOM05D002129 ORTHO05D002188 8.5e-06 58.2 321 25.2


User provided reference genes

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