Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 0.0e+00 2305.4 1386 100.0
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 0.0e+00 1170.6 1456 57.1
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 2.4e-273 946.4 1508 46.4
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 4.1e-241 839.3 1538 44.1
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 1.4e-236 824.3 1473 43.7
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 4.4e-235 819.3 1504 43.0
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 7.6e-235 818.5 1490 45.0
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 2.9e-234 816.6 1576 41.8
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 1.4e-233 814.3 1476 42.5
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 1.4e-233 814.3 1542 41.5
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 1.4e-233 814.3 1422 44.2
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 7.3e-230 802.0 1397 43.6
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 1.1e-228 798.1 1489 41.6
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 1.4e-228 797.7 1497 43.0
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 4.0e-228 796.2 1260 46.8
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 1.2e-227 794.7 1393 44.5
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 2.4e-225 786.9 1485 42.3
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 5.4e-225 785.8 1499 42.0
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 2.1e-224 783.9 1461 46.3
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 6.7e-223 778.9 1488 41.7
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 6.7e-223 778.9 1493 41.8
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 5.6e-222 775.8 1488 42.7
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 9.6e-222 775.0 1494 41.9
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 2.8e-221 773.5 1499 44.8
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 4.0e-220 769.6 1489 41.4
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 4.0e-220 769.6 1497 42.5
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 4.5e-219 766.1 1488 40.1
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 9.9e-219 765.0 1472 42.7
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 2.2e-218 763.8 1474 41.2
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 2.2e-218 763.8 1566 40.1
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 1.9e-217 760.8 1493 41.9
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 2.4e-217 760.4 1521 42.0
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 7.1e-217 758.8 1493 42.7
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 4.6e-216 756.1 1534 40.5
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 3.9e-215 753.1 1486 40.1
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 6.7e-215 752.3 1397 43.5
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 3.3e-214 750.0 1203 45.3
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.3e-213 748.0 1507 41.3
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 1.6e-213 747.7 1473 41.5
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 2.1e-213 747.3 1458 44.7
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 3.7e-213 746.5 1511 40.8
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 4.8e-213 746.1 1550 41.1
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 1.1e-212 745.0 1473 43.9
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 5.3e-212 742.7 1210 46.4
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 5.3e-212 742.7 1496 40.6
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 4.5e-211 739.6 1460 44.5
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 2.5e-209 733.8 1480 40.4
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 5.5e-209 732.6 1502 41.1
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 4.6e-208 729.6 1547 40.4
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 1.0e-207 728.4 1494 40.3
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 5.1e-207 726.1 1369 41.6
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 8.7e-207 725.3 1481 43.7
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 1.9e-206 724.2 1504 40.0
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 1.9e-206 724.2 1469 40.9
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 1.9e-206 724.2 1537 39.9
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 1.3e-205 721.5 1493 40.6
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 6.3e-205 719.2 1464 39.7
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 5.9e-203 712.6 1449 43.3
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 6.1e-200 702.6 1451 43.0
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 1.1e-198 698.4 1457 39.9
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 9.7e-198 695.3 1485 39.5
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 3.7e-197 693.3 1465 40.1
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 4.8e-197 693.0 1456 40.4
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 2.4e-196 690.6 1490 40.3
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 6.5e-194 682.6 1566 38.7
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 1.9e-193 681.0 1538 40.1
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 1.9e-193 681.0 1465 39.1
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 3.2e-185 653.7 1190 45.0
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 3.2e-185 653.7 1310 43.3
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 6.1e-184 649.4 1461 40.1
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 1.5e-182 644.8 663 57.5
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 3.7e-181 640.2 1470 40.1
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 1.4e-180 638.3 812 51.5
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 2.2e-178 630.9 1464 37.7
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 3.8e-178 630.2 1474 38.5
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 1.9e-177 627.9 1626 35.4
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 1.2e-176 625.2 1252 40.7
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 3.3e-174 617.1 1483 38.7
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 1.1e-172 612.1 1414 39.5
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 1.1e-172 612.1 1589 36.8
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 7.0e-172 609.4 1433 37.3
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 2.7e-171 607.4 1482 39.9
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 1.0e-170 605.5 1409 41.3
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 2.6e-166 590.9 1505 36.5
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 1.7e-165 588.2 1446 36.9
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 2.2e-165 587.8 1523 37.6
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 3.1e-164 583.9 1447 37.0
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 3.5e-163 580.5 1173 40.8
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 1.7e-162 578.2 1451 36.9
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 2.3e-162 577.8 1438 38.0
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 2.3e-162 577.8 1438 38.0
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 5.5e-161 573.2 1500 41.5
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 4.4e-158 563.5 1498 35.3
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 2.4e-156 557.8 1307 41.2
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.7e-154 551.6 1449 35.7
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 2.2e-149 534.6 1463 38.5
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 7.8e-147 526.2 1483 37.0
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 4.6e-139 500.4 1052 39.1
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.2e-134 485.7 1359 33.0
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 9.9e-126 456.1 1290 34.7
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 4.9e-125 453.8 1178 32.7
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 5.4e-124 450.3 1452 36.3
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 9.0e-119 433.0 1170 35.5
Gohir.A04G146601 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.5e-110 405.6 578 50.2
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 8.7e-98 363.2 1304 29.9
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 2.2e-88 332.0 618 40.9
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 1.6e-83 315.8 1426 32.0
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 3.5e-62 245.0 1451 24.2
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 7.2e-60 237.3 1476 26.6
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 7.5e-57 227.3 271 42.8
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 2.2e-56 225.7 1401 24.5
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 4.1e-55 221.5 853 30.6
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 1.0e-53 216.9 1179 27.1
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 3.4e-49 201.8 1454 26.1
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 3.5e-46 191.8 470 38.1
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 2.3e-45 189.1 461 37.7
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 1.9e-44 186.0 193 56.5
Os06g0562700 Oryza sativa ssp. japonica HOM05D004594 ORTHO05D005225 2.3e-37 162.5 353 38.8
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 3.6e-35 155.2 92 77.2
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 1.4e-34 153.3 172 48.8
Oeu034639.1 Olea europaea HOM05D004594 ORTHO05D005225 2.6e-33 149.1 242 48.3
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 2.3e-26 125.9 229 40.6
Lj3A852T53 Lonicera japonica HOM05D004594 ORTHO05D005225 5.2e-26 124.8 132 55.3
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 1.4e-23 116.7 389 30.8
Gohir.1Z049616 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.4e-23 116.7 78 73.1
TPR.G11445 Trifolium pratense HOM05D004594 ORTHO05D005225 3.0e-21 109.0 62 83.9
Lsat_1_v5_gn_3_92661 Lactuca sativa HOM05D004594 ORTHO05D005225 1.1e-20 107.1 102 57.8
Lsat_1_v5_gn_4_108040 Lactuca sativa HOM05D004594 ORTHO05D005225 3.1e-18 99.0 63 69.8
Lsat_1_v5_gn_1_53021 Lactuca sativa HOM05D004594 ORTHO05D005225 4.6e-14 85.1 62 64.5
MBI02_g24139_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.0e-13 84.0 69 59.4
Cre06.g283634 Chlamydomonas reinhardtii HOM05D004594 ORTHO05D005225 2.3e-13 82.8 228 27.2
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 3.3e-12 79.0 359 27.3
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 5.6e-12 78.2 50 70.0
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 1.6e-11 76.6 50 66.0
SHI24778 Sapria himalayana HOM05D004594 ORTHO05D005225 1.6e-11 76.6 49 75.5
A02p33250 Brassica napus HOM05D004594 ORTHO05D005225 2.8e-11 75.9 77 50.6
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 1.1e-10 73.9 487 26.5
HPP92_001999 Vanilla planifolia HOM05D004594 ORTHO05D005225 1.4e-07 63.5 92 42.4
Actinidia04099 Actinidia chinensis HOM05D004594 ORTHO05D005225 3.2e-07 62.4 193 33.7
Nn3g17298 Nelumbo nucifera HOM05D004594 ORTHO05D005225 6.0e-06 58.2 71 40.8


User provided reference genes

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