Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold139G35388 Striga asiatica HOM05D028223 ORTHO05D051408 4.7e-171 604.4 293 100.0
SGA_v2.0_scaffold126G33915 Striga asiatica HOM05D028223 ORTHO05D051408 7.9e-17 92.0 55 83.6
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 5.1e-16 89.4 73 49.3
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-13 81.6 98 39.8
SGA_v2.0_scaffold127G33968 Striga asiatica HOM05D009140 ORTHO05D000004 2.0e-12 77.4 67 47.8
SGA_v2.0_scaffold132G34546 Striga asiatica HOM05D010565 ORTHO05D011213 2.0e-12 77.4 80 41.2
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 4.5e-12 76.3 80 43.8
Cc08_g06220 Coffea canephora HOM05D000003 ORTHO05D000004 5.9e-12 75.9 69 43.5
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 8.5e-11 72.0 73 42.5
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 1.4e-10 71.2 111 33.3
Cc01_g07280 Coffea canephora HOM05D000003 ORTHO05D000004 2.5e-10 70.5 69 44.9
SGA_v2.0_scaffold335G49110 Striga asiatica HOM05D001364 ORTHO05D001316 3.2e-10 70.1 80 36.2
Cc11_g12030 Coffea canephora HOM05D000003 ORTHO05D000004 5.5e-10 69.3 71 38.0
SGA_v2.0_scaffold134G34731 Striga asiatica HOM05D009140 ORTHO05D000004 9.4e-10 68.6 53 54.7
SGA_v2.0_scaffold1G00790 Striga asiatica HOM05D010565 ORTHO05D011213 1.6e-09 67.8 69 42.0
SGA_v2.0_scaffold380G50369 Striga asiatica HOM05D010565 ORTHO05D011213 3.6e-09 66.6 61 44.3
SGA_v2.0_scaffold43G16501 Striga asiatica HOM05D000007 ORTHO05D021020 3.6e-09 66.6 62 46.8
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 3.6e-09 66.6 52 53.8
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 4.7e-09 66.2 135 28.9
SGA_v2.0_scaffold67G22785 Striga asiatica HOM05D010565 ORTHO05D011213 4.7e-09 66.2 51 45.1
BolC3t16094H Brassica oleracea HOM05D000003 ORTHO05D016458 6.1e-09 65.9 51 52.9
EL10Ac9g21339 Beta vulgaris HOM05D000003 ORTHO05D000167 7.9e-09 65.5 64 43.8
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 1.0e-08 65.1 45 66.7
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 1.0e-08 65.1 89 33.7
Cc04_g14660 Coffea canephora HOM05D000003 ORTHO05D000167 2.3e-08 63.9 82 35.4
BcaB07g33905 Brassica carinata HOM05D014135 ORTHO05D016458 3.0e-08 63.5 51 51.0
SGA_v2.0_scaffold355G49769 Striga asiatica HOM05D000003 ORTHO05D011213 3.0e-08 63.5 60 41.7
SGA_v2.0_scaffold5G02882 Striga asiatica HOM05D001043 ORTHO05D001555 3.0e-08 63.5 77 36.4
Aa31LG1G13000 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.1e-08 62.8 49 55.1
BcaC02g12393 Brassica carinata HOM05D000003 ORTHO05D016043 6.7e-08 62.4 61 49.2
SGA_v2.0_scaffold419G51290 Striga asiatica HOM05D010565 ORTHO05D011213 6.7e-08 62.4 62 38.7
Aa31LG3G4270 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.8e-08 62.0 48 54.2
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.8e-08 62.0 54 46.3
Aa31sc77G40 Aethionema arabicum HOM05D000003 ORTHO05D009772 8.8e-08 62.0 50 52.0
BraA05t23088Z Brassica rapa HOM05D001239 ORTHO05D000925 1.1e-07 61.6 90 42.2
SGA_v2.0_scaffold117G32378 Striga asiatica HOM05D009140 ORTHO05D011213 1.1e-07 61.6 91 36.3
SGA_v2.0_scaffold64G21963 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-07 61.6 84 35.7
Lj4g0023123 Lotus japonicus HOM05D000003 ORTHO05D000004 1.5e-07 61.2 68 33.8
Sp6g38460 Schrenkiella parvula HOM05D000003 ORTHO05D009772 1.5e-07 61.2 49 51.0
SGA_v2.0_scaffold16G07893 Striga asiatica HOM05D016777 ORTHO05D026198 1.5e-07 61.2 47 55.3
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-07 60.8 52 48.1
SGA_v2.0_scaffold83G26428 Striga asiatica HOM05D000003 ORTHO05D051420 2.6e-07 60.5 49 49.0
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.3e-07 60.1 48 56.2
C09p19850 Brassica napus HOM05D000003 ORTHO05D009772 3.3e-07 60.1 40 57.5
BraA02t06467Z Brassica rapa HOM05D001239 ORTHO05D000925 3.3e-07 60.1 90 36.7
PSO238G0046 Papaver somniferum HOM05D003407 ORTHO05D001026 4.4e-07 59.7 80 36.2
SGA_v2.0_scaffold10G05484 Striga asiatica HOM05D010565 ORTHO05D011213 4.4e-07 59.7 53 45.3
SGA_v2.0_scaffold120G33020 Striga asiatica HOM05D000003 ORTHO05D000004 4.4e-07 59.7 103 31.1
SGA_v2.0_scaffold221G42693 Striga asiatica HOM05D002835 ORTHO05D003008 4.4e-07 59.7 95 33.7
EL10Ac1g01308 Beta vulgaris HOM05D000003 ORTHO05D000167 7.4e-07 58.9 68 36.8
EL10Ac7g17531 Beta vulgaris HOM05D000003 ORTHO05D000004 7.4e-07 58.9 68 36.8
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 7.4e-07 58.9 160 28.1
Aa31sc19G100 Aethionema arabicum HOM05D000003 ORTHO05D000411 9.7e-07 58.5 53 49.1
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 9.7e-07 58.5 53 49.1
Lj6g0001642 Lotus japonicus HOM05D000003 ORTHO05D000167 9.7e-07 58.5 63 39.7
SGA_v2.0_scaffold127G33986 Striga asiatica HOM05D009140 ORTHO05D000004 9.7e-07 58.5 51 49.0
Aa31LG11G9070 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-06 58.2 54 50.0
PSO017G2202 Papaver somniferum HOM05D003407 ORTHO05D001026 1.3e-06 58.2 64 45.3
TPR.G36801 Trifolium pratense HOM05D000003 ORTHO05D000004 1.3e-06 58.2 69 34.8
C05p29390 Brassica napus HOM05D000003 ORTHO05D009772 1.7e-06 57.8 72 38.9
C09p39900 Brassica napus HOM05D000003 ORTHO05D000004 1.7e-06 57.8 68 45.6
BolC5t31671H Brassica oleracea HOM05D000003 ORTHO05D009772 1.7e-06 57.8 72 38.9
AUR62005341 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.7e-06 57.8 73 32.9
AUR62040533 Chenopodium quinoa HOM05D000102 ORTHO05D000006 1.7e-06 57.8 57 38.6
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 1.7e-06 57.8 60 38.3
Aa31LG10G2340 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-06 57.4 49 49.0
Aa31LG1G5430 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.2e-06 57.4 57 47.4
Aa31LG7G12380 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.2e-06 57.4 52 50.0
Aa31sc17G250 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.2e-06 57.4 77 39.0
BcaC07g42703 Brassica carinata HOM05D001239 ORTHO05D000925 2.2e-06 57.4 50 52.0
Aa31LG7G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.8e-06 57.0 49 46.9
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 2.8e-06 57.0 85 40.0
BcaB03g16821 Brassica carinata HOM05D000003 ORTHO05D001498 3.7e-06 56.6 53 47.2
BcaNung01395 Brassica carinata HOM05D000003 ORTHO05D000004 3.7e-06 56.6 51 47.1
C07p06100 Brassica napus HOM05D000003 ORTHO05D000004 3.7e-06 56.6 54 44.4
BolC7t41023H Brassica oleracea HOM05D000003 ORTHO05D000004 3.7e-06 56.6 54 44.4
PSO210G4139 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-06 56.6 72 34.7
SGA_v2.0_scaffold81G26044 Striga asiatica HOM05D000123 ORTHO05D000004 3.7e-06 56.6 43 51.2
TAR228G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000004 3.7e-06 56.6 65 36.9
Aa31LG11G5960 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.8e-06 56.2 54 48.1
Aa31LG11G6710 Aethionema arabicum HOM05D000003 ORTHO05D009772 4.8e-06 56.2 80 33.8
Aa31LG1G4840 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.8e-06 56.2 49 49.0
EL10Ac8g18252 Beta vulgaris HOM05D000003 ORTHO05D000004 6.3e-06 55.8 68 33.8
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 6.3e-06 55.8 55 40.0
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 6.3e-06 55.8 62 41.9
BcaB05g21914 Brassica carinata HOM05D000003 ORTHO05D001498 6.3e-06 55.8 53 49.1
BcaB05g23696 Brassica carinata HOM05D000003 ORTHO05D001498 6.3e-06 55.8 53 49.1
BcaC08g43351 Brassica carinata HOM05D000003 ORTHO05D001498 6.3e-06 55.8 78 37.2
BolC4t22146H Brassica oleracea HOM05D001239 ORTHO05D000925 6.3e-06 55.8 90 36.7
BraA08t32601Z Brassica rapa HOM05D000003 ORTHO05D000925 6.3e-06 55.8 80 38.8
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.2e-06 55.5 54 40.7
AUR62003020 Chenopodium quinoa HOM05D000003 ORTHO05D000004 8.2e-06 55.5 59 39.0
COL.COLO4_05866 Corchorus olitorius HOM05D012148 ORTHO05D000004 8.2e-06 55.5 44 45.5
PSO675G5675 Papaver somniferum HOM05D000003 ORTHO05D000004 8.2e-06 55.5 72 36.1
SGA_v2.0_scaffold208G42006 Striga asiatica HOM05D028223 ORTHO05D011213 8.2e-06 55.5 44 47.7


User provided reference genes

Program Settings