Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold137G35103 Striga asiatica HOM05D001734 ORTHO05D028470 5.2e-62 241.1 144 100.0
SGA_v2.0_scaffold707G53490 Striga asiatica HOM05D029710 ORTHO05D028470 9.0e-22 107.5 58 91.4
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 1.5e-08 63.5 26 100.0
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.5e-08 63.5 26 100.0
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 1.5e-08 63.5 26 100.0
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 1.5e-08 63.5 26 100.0
SGA_v2.0_scaffold990G53774 Striga asiatica HOM05D001734 ORTHO05D003483 1.5e-08 63.5 26 100.0
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 3.3e-08 62.4 26 96.2
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 3.3e-08 62.4 26 96.2
Ah.11g051590 Amaranthus hybridus HOM05D001734 ORTHO05D003483 4.3e-08 62.0 26 96.2
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 4.3e-08 62.0 26 96.2
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 5.6e-08 61.6 26 96.2
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 5.6e-08 61.6 26 92.3
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 5.6e-08 61.6 25 96.0
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 5.6e-08 61.6 26 96.2
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 9.6e-08 60.8 26 92.3
unitig_0.g1443 Utricularia gibba HOM05D001734 ORTHO05D003483 9.6e-08 60.8 26 96.2
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 1.3e-07 60.5 26 96.2
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.3e-07 60.5 26 96.2
Hma1.2p1_0660F.1_g197810 Hydrangea macrophylla HOM05D001734 ORTHO05D003483 1.3e-07 60.5 26 96.2
Hma1.2p1_3947F.1_g338046 Hydrangea macrophylla HOM05D001734 ORTHO05D003483 1.3e-07 60.5 26 96.2
Lj9A448G35 Lonicera japonica HOM05D001734 ORTHO05D003483 1.3e-07 60.5 26 96.2
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 1.6e-07 60.1 26 92.3
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 3.7e-07 58.9 26 92.3
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 3.7e-07 58.9 26 92.3
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 4.8e-07 58.5 26 92.3
MSTRG.2696 Avicennia marina HOM05D000624 ORTHO05D000495 4.8e-07 58.5 64 59.4
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 4.8e-07 58.5 26 88.5
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 4.8e-07 58.5 26 88.5
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 4.8e-07 58.5 26 88.5
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 4.8e-07 58.5 26 92.3
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 4.8e-07 58.5 26 92.3
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 6.2e-07 58.2 26 88.5
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 6.2e-07 58.2 26 88.5
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 6.2e-07 58.2 26 88.5
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 6.2e-07 58.2 26 88.5
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 6.2e-07 58.2 26 88.5
Hma1.2p1_2281F.1_g318740 Hydrangea macrophylla HOM05D000624 ORTHO05D000495 6.2e-07 58.2 93 40.9
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 6.2e-07 58.2 26 88.5
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 6.2e-07 58.2 26 88.5
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 8.1e-07 57.8 26 88.5
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 8.1e-07 57.8 26 88.5
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 8.1e-07 57.8 26 88.5
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 8.1e-07 57.8 26 88.5
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 8.1e-07 57.8 26 88.5
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 8.1e-07 57.8 26 88.5
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 1.1e-06 57.4 26 84.6
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.1e-06 57.4 26 84.6
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.1e-06 57.4 26 84.6
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.1e-06 57.4 26 92.3
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 1.1e-06 57.4 26 88.5
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.4e-06 57.0 26 88.5
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 1.4e-06 57.0 26 88.5
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 2.4e-06 56.2 26 88.5
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 3.1e-06 55.8 26 88.5
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 3.1e-06 55.8 26 88.5
Lj2C465T10 Lonicera japonica HOM05D000624 ORTHO05D000495 3.1e-06 55.8 87 44.8
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 3.1e-06 55.8 26 88.5
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 3.1e-06 55.8 26 88.5
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 3.1e-06 55.8 26 88.5
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 3.1e-06 55.8 26 88.5
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 3.1e-06 55.8 26 88.5
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 3.1e-06 55.8 26 88.5
VMungo1309G1088 Vigna mungo HOM05D001734 ORTHO05D003483 3.1e-06 55.8 26 88.5
Cc04_g14130 Coffea canephora HOM05D001734 ORTHO05D003483 4.0e-06 55.5 26 84.6
MBI10_g06739_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 5.3e-06 55.1 26 84.6
MD14G1180200 Malus domestica HOM05D001734 ORTHO05D003483 5.3e-06 55.1 26 84.6
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 5.3e-06 55.1 26 84.6
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 6.9e-06 54.7 26 84.6
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 6.9e-06 54.7 26 80.8
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 6.9e-06 54.7 26 84.6
Oeu062507.1 Olea europaea HOM05D000624 ORTHO05D000495 6.9e-06 54.7 64 57.8
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 6.9e-06 54.7 26 84.6
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 6.9e-06 54.7 26 84.6
CAN.G900.54 Capsicum annuum HOM05D000624 ORTHO05D000495 9.0e-06 54.3 91 41.8
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 9.0e-06 54.3 25 88.0


User provided reference genes

Program Settings