Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.7e-154 549.3 272 100.0
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 1.8e-119 433.0 272 80.5
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 9.6e-118 427.2 272 80.1
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 4.8e-117 424.9 272 79.0
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 3.3e-110 402.1 272 74.6
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 1.3e-109 400.2 269 73.6
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 8.2e-109 397.5 272 74.3
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 2.6e-107 392.5 277 71.1
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.3e-106 390.2 272 72.4
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.2e-106 389.4 272 72.1
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 3.8e-106 388.7 263 72.2
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.0e-106 388.3 272 72.1
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.2e-104 383.6 266 71.1
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 2.1e-104 382.9 263 72.6
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.7e-104 382.5 271 72.0
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 6.1e-104 381.3 265 73.6
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 6.1e-104 381.3 265 74.0
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 7.9e-104 380.9 263 72.2
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 1.0e-103 380.6 265 72.8
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 1.0e-103 380.6 265 72.8
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 1.0e-103 380.6 265 73.2
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.8e-103 379.8 271 71.6
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 3.0e-103 379.0 264 71.6
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 3.9e-103 378.6 263 71.9
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.1e-102 377.1 266 68.8
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 2.5e-102 375.9 268 72.4
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 2.5e-102 375.9 264 71.2
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 3.3e-102 375.6 262 71.8
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 4.3e-102 375.2 274 69.7
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 5.7e-102 374.8 262 73.3
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 7.4e-102 374.4 263 71.9
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 9.7e-102 374.0 264 70.8
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 1.7e-101 373.2 262 72.5
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.8e-101 372.5 275 69.5
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 1.8e-100 369.8 264 70.5
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 1.8e-100 369.8 260 71.5
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 6.9e-100 367.9 272 71.0
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 9.1e-100 367.5 263 68.4
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 1.5e-99 366.7 260 70.8
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 1.5e-99 366.7 267 69.7
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 2.0e-99 366.3 264 69.3
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 3.4e-99 365.5 262 69.8
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 5.9e-99 364.8 266 68.4
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 5.9e-99 364.8 266 67.7
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 1.0e-98 364.0 272 68.0
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 1.7e-98 363.2 267 68.5
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.1e-97 360.5 262 68.7
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 1.4e-97 360.1 262 68.7
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.9e-97 359.8 262 68.7
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 2.5e-97 359.4 262 68.3
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 3.2e-97 359.0 262 67.9
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 4.2e-97 358.6 262 68.3
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 9.4e-97 357.5 264 67.4
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 1.2e-96 357.1 282 65.6
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.6e-96 356.7 262 67.9
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 2.1e-96 356.3 273 67.4
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 2.7e-96 355.9 264 67.0
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 1.0e-95 354.0 271 63.5
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 1.4e-95 353.6 262 67.6
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 3.9e-95 352.1 262 66.8
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 3.9e-95 352.1 253 70.0
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 5.1e-95 351.7 262 66.8
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 5.1e-95 351.7 262 66.8
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 5.1e-95 351.7 262 66.8
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 5.1e-95 351.7 286 64.0
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.7e-95 351.3 262 66.0
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 6.7e-95 351.3 262 66.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.3e-94 349.0 262 65.6
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 5.7e-94 348.2 264 65.2
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 7.4e-94 347.8 259 66.4
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.7e-93 346.7 267 64.4
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 1.7e-93 346.7 259 66.4
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 2.4e-92 342.8 265 66.8
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 7.0e-92 341.3 269 66.9
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 2.6e-91 339.3 255 65.9
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 4.5e-91 338.6 271 61.6
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 2.2e-90 336.3 264 62.5
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.8e-90 335.5 259 63.3
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 1.5e-89 333.6 272 64.7
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 7.2e-89 331.3 272 62.5
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.6e-88 330.1 282 59.9
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.6e-88 330.1 272 61.4
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.1e-88 329.7 272 62.1
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 4.4e-86 322.0 305 57.0
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 5.7e-86 321.6 262 63.0
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 3.7e-85 318.9 230 69.6
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 4.8e-85 318.5 294 57.8
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 1.2e-83 313.9 231 69.7
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.6e-83 313.5 303 55.8
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 7.5e-78 294.7 226 69.9
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 2.2e-77 293.1 269 55.0
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 4.8e-77 292.0 262 60.7
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.1e-76 290.8 226 65.5
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 7.0e-76 288.1 296 54.1
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.7e-74 283.5 256 55.5
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.9e-73 280.0 223 63.2
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 5.5e-73 278.5 230 62.2
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 9.4e-73 277.7 253 56.9
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 7.0e-68 261.5 181 71.3
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 2.0e-67 260.0 327 46.5
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 4.5e-67 258.8 260 50.4
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 8.6e-66 254.6 225 61.3
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 2.9e-61 239.6 250 48.4
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.2e-59 234.2 255 47.8
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.7e-58 230.3 250 51.2
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 1.0e-55 221.1 183 58.5
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 8.9e-55 218.0 225 55.6
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 2.6e-54 216.5 207 55.6
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 2.6e-54 216.5 207 55.6
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 4.4e-54 215.7 251 44.2
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 6.4e-53 211.8 172 62.8
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 3.9e-50 202.6 124 82.3
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 6.8e-39 165.2 122 69.7
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 4.1e-36 156.0 158 53.2
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.3e-34 150.2 93 78.5
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 1.5e-33 147.5 194 44.8
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 3.5e-27 126.3 83 73.5
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 2.3e-26 123.6 90 66.7
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.9e-25 120.6 69 87.0
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 6.9e-23 112.1 72 72.2
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 5.4e-20 102.4 128 46.9
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 1.3e-18 97.8 65 76.9
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 7.4e-17 92.0 85 55.3
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.3e-08 64.7 173 29.5
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 6.2e-08 62.4 65 49.2
Cre14.g619613 Chlamydomonas reinhardtii HOM05D006316 ORTHO05D008032 1.0e-05 55.1 97 29.9


User provided reference genes

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