Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold130G34321 Striga asiatica HOM05D009041 ORTHO05D010054 3.1e-77 291.6 135 100.0
SGA_v2.0_scaffold211G42151 Striga asiatica HOM05D009041 ORTHO05D010054 4.0e-56 221.5 105 95.2
SGA_v2.0_scaffold63G21825 Striga asiatica HOM05D009041 ORTHO05D010054 3.6e-33 145.2 107 60.7
SGA_v2.0_scaffold25G10890 Striga asiatica HOM05D009041 ORTHO05D010054 1.4e-32 143.3 103 64.1
SGA_v2.0_scaffold47G17570 Striga asiatica HOM05D009041 ORTHO05D010054 5.2e-32 141.4 109 62.4
SGA_v2.0_scaffold160G37740 Striga asiatica HOM05D009041 ORTHO05D010054 2.2e-30 136.0 96 64.6
SGA_v2.0_scaffold13G06721 Striga asiatica HOM05D009041 ORTHO05D010054 8.4e-30 134.0 108 53.7
SGA_v2.0_scaffold26G11342 Striga asiatica HOM05D009041 ORTHO05D010054 8.4e-30 134.0 108 53.7
SGA_v2.0_scaffold366G50039 Striga asiatica HOM05D009041 ORTHO05D010054 3.2e-29 132.1 105 54.3
SGA_v2.0_scaffold6G03390 Striga asiatica HOM05D009041 ORTHO05D010054 3.2e-29 132.1 109 56.0
SGA_v2.0_scaffold668G53413 Striga asiatica HOM05D009041 ORTHO05D010054 7.1e-29 131.0 92 64.1
SGA_v2.0_scaffold347G49563 Striga asiatica HOM05D009041 ORTHO05D010054 9.3e-29 130.6 95 61.1
SGA_v2.0_scaffold21G09336 Striga asiatica HOM05D009041 ORTHO05D010054 4.6e-28 128.3 103 55.3
SGA_v2.0_scaffold5G02531 Striga asiatica HOM05D009041 ORTHO05D010054 6.0e-28 127.9 92 57.6
SGA_v2.0_scaffold11G05825 Striga asiatica HOM05D009041 ORTHO05D010054 1.0e-27 127.1 92 57.6
SGA_v2.0_scaffold180G39666 Striga asiatica HOM05D000045 ORTHO05D010054 6.6e-27 124.4 91 59.3
SGA_v2.0_scaffold115G32155 Striga asiatica HOM05D009041 ORTHO05D010054 8.7e-27 124.0 109 52.3
SGA_v2.0_scaffold548G52852 Striga asiatica HOM05D009041 ORTHO05D010054 8.7e-27 124.0 109 52.3
SGA_v2.0_scaffold270G46313 Striga asiatica HOM05D009041 ORTHO05D010054 1.9e-26 122.9 92 60.9
SGA_v2.0_scaffold21G09437 Striga asiatica HOM05D009041 ORTHO05D010054 3.3e-26 122.1 89 59.6
SGA_v2.0_scaffold79G25579 Striga asiatica HOM05D009041 ORTHO05D010054 7.3e-26 120.9 92 55.4
SGA_v2.0_scaffold46G17333 Striga asiatica HOM05D009041 ORTHO05D010054 9.3e-21 104.0 70 61.4
SGA_v2.0_scaffold249G44954 Striga asiatica HOM05D009041 ORTHO05D010054 2.1e-20 102.8 142 41.5
SGA_v2.0_scaffold142G35653 Striga asiatica HOM05D009041 ORTHO05D010054 3.0e-19 99.0 97 47.4
SGA_v2.0_scaffold577G53016 Striga asiatica HOM05D009041 ORTHO05D010054 1.1e-16 90.5 72 55.6
SGA_v2.0_scaffold147G36271 Striga asiatica HOM05D009041 ORTHO05D010054 9.0e-16 87.4 64 57.8
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 1.2e-15 87.0 74 51.4
SGA_v2.0_scaffold18G08321 Striga asiatica HOM05D009041 ORTHO05D010054 4.5e-15 85.1 63 55.6
TPR.G30322 Trifolium pratense HOM05D009041 ORTHO05D010054 2.1e-12 76.3 69 49.3
SGA_v2.0_scaffold27G11549 Striga asiatica HOM05D009041 ORTHO05D010054 2.7e-12 75.9 91 42.9
SGA_v2.0_scaffold309G48184 Striga asiatica HOM05D014716 ORTHO05D010054 4.6e-12 75.1 106 34.0
TPR.G33858 Trifolium pratense HOM05D001572 ORTHO05D000733 1.3e-11 73.6 69 47.8
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 1.8e-11 73.2 93 34.4
Hund03678 Selenicereus undatus HOM05D004088 ORTHO05D010054 1.8e-11 73.2 74 43.2
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 2.3e-11 72.8 63 47.6
EL10Ac5g11838 Beta vulgaris HOM05D000045 ORTHO05D010054 5.1e-11 71.6 89 39.3
EL10Ac2g03825 Beta vulgaris HOM05D000045 ORTHO05D010054 6.7e-11 71.2 89 39.3
EL10Ac4g09061 Beta vulgaris HOM05D010653 ORTHO05D013151 6.7e-11 71.2 89 39.3
EL10Ac6g15511 Beta vulgaris HOM05D000045 ORTHO05D010054 6.7e-11 71.2 89 39.3
EL10Ac8g19823 Beta vulgaris HOM05D000045 ORTHO05D010054 6.7e-11 71.2 89 39.3
EL10Ac9g21271 Beta vulgaris HOM05D000045 ORTHO05D010054 6.7e-11 71.2 89 39.3
EL10Ac9g22734 Beta vulgaris HOM05D000045 ORTHO05D010054 6.7e-11 71.2 89 39.3
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-10 70.5 72 41.7
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-10 70.5 72 41.7
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-10 70.5 72 41.7
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 1.1e-10 70.5 72 41.7
Hund10326 Selenicereus undatus HOM05D020589 ORTHO05D010054 1.1e-10 70.5 66 45.5
SGA_v2.0_scaffold54G19493 Striga asiatica HOM05D009041 ORTHO05D010054 1.5e-10 70.1 58 50.0
EL10Ac1g02190 Beta vulgaris HOM05D000045 ORTHO05D010054 1.9e-10 69.7 89 38.2
EL10Ac8g19058 Beta vulgaris HOM05D000045 ORTHO05D010054 1.9e-10 69.7 89 38.2
EL10Ac8g19517 Beta vulgaris HOM05D000045 ORTHO05D010054 1.9e-10 69.7 89 38.2
EL10Ac4g08127 Beta vulgaris HOM05D000045 ORTHO05D000067 2.5e-10 69.3 75 42.7
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 2.5e-10 69.3 78 38.5
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 2.5e-10 69.3 72 40.3
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 2.5e-10 69.3 78 38.5
EL10Ac2g03240 Beta vulgaris HOM05D000045 ORTHO05D000695 3.3e-10 68.9 75 42.7
EL10Ac4g08128 Beta vulgaris HOM05D000045 ORTHO05D000067 4.3e-10 68.6 75 42.7
EL10Ac4g09892 Beta vulgaris HOM05D000045 ORTHO05D000067 4.3e-10 68.6 75 42.7
EL10Ac5g11529 Beta vulgaris HOM05D000045 ORTHO05D000067 4.3e-10 68.6 75 42.7
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 4.3e-10 68.6 75 42.7
Ah.07g198010 Amaranthus hybridus HOM05D000045 ORTHO05D010054 5.6e-10 68.2 71 39.4
EL10Ac1g01865 Beta vulgaris HOM05D000045 ORTHO05D010054 5.6e-10 68.2 89 38.2
EL10Ac9g21079 Beta vulgaris HOM05D000045 ORTHO05D000695 7.4e-10 67.8 75 42.7
SGA_v2.0_scaffold108G30934 Striga asiatica HOM05D000045 ORTHO05D010054 9.6e-10 67.4 68 47.1
AUR62024057 Chenopodium quinoa HOM05D000045 ORTHO05D000695 1.3e-09 67.0 71 43.7
EL10Ac1g01956 Beta vulgaris HOM05D000045 ORTHO05D010054 1.6e-09 66.6 75 41.3
Medtr6g060410 Medicago truncatula HOM05D009041 ORTHO05D010054 2.1e-09 66.2 62 43.5
Medtr4g080290 Medicago truncatula HOM05D009041 ORTHO05D010054 6.2e-09 64.7 62 41.9
HanXRQChr14g0449641 Helianthus annuus HOM05D000045 ORTHO05D000067 8.2e-09 64.3 69 46.4
EL10Ac1g01220 Beta vulgaris HOM05D000045 ORTHO05D010054 1.1e-08 63.9 89 36.0
EL10Ac2g03393 Beta vulgaris HOM05D009041 ORTHO05D010054 1.4e-08 63.5 83 36.1
Hund25812 Selenicereus undatus HOM05D000045 ORTHO05D010054 1.8e-08 63.2 79 36.7
AUR62035444 Chenopodium quinoa HOM05D009508 ORTHO05D000695 2.4e-08 62.8 99 39.4
ECA232G1430 Erigeron canadensis HOM05D000045 ORTHO05D000695 2.4e-08 62.8 69 40.6
ECA233G1000 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.4e-08 62.8 69 40.6
EL10Ac7g17203 Beta vulgaris HOM05D000045 ORTHO05D010054 4.0e-08 62.0 72 37.5
AUR62026947 Chenopodium quinoa HOM05D009508 ORTHO05D000695 4.0e-08 62.0 71 42.3
EL10Ac1g01998 Beta vulgaris HOM05D000045 ORTHO05D010054 5.3e-08 61.6 77 36.4
EL10Ac9g22455 Beta vulgaris HOM05D010653 ORTHO05D010054 5.3e-08 61.6 89 34.8
AUR62034412 Chenopodium quinoa HOM05D000575 ORTHO05D000695 5.3e-08 61.6 71 40.8
Hund31201 Selenicereus undatus HOM05D000045 ORTHO05D000067 5.3e-08 61.6 79 36.7
EL10Ac6g13880 Beta vulgaris HOM05D000045 ORTHO05D010054 6.9e-08 61.2 89 33.7
AUR62030095 Chenopodium quinoa HOM05D009508 ORTHO05D000695 6.9e-08 61.2 111 35.1
AUR62035958 Chenopodium quinoa HOM05D009508 ORTHO05D000695 6.9e-08 61.2 72 43.1
Hund04144 Selenicereus undatus HOM05D000045 ORTHO05D000695 9.0e-08 60.8 66 42.4
AUR62041424 Chenopodium quinoa HOM05D009508 ORTHO05D000695 1.2e-07 60.5 71 40.8
ECA240G3819 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.5e-07 60.1 69 39.1
MBI07_g18522_MAGBIO Magnolia biondii HOM05D057054 ORTHO05D014656 2.6e-07 59.3 62 46.8
MBI10_g43911_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000611 2.6e-07 59.3 80 40.0
CDE05G1679 Ceratophyllum demersum HOM05D000045 ORTHO05D000611 3.4e-07 58.9 110 34.5
ECA238G0358 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.4e-07 58.9 69 39.1
ECA248G3866 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.4e-07 58.9 69 42.0
PSO384G0901 Papaver somniferum HOM05D000045 ORTHO05D000067 4.5e-07 58.5 95 34.7
GSVIVG01012789001 Vitis vinifera HOM05D000045 ORTHO05D037848 4.5e-07 58.5 65 43.1
EL10Ac4g08992 Beta vulgaris HOM05D000045 ORTHO05D010054 5.8e-07 58.2 95 34.7
FvH4_6g21931 Fragaria vesca HOM05D000045 ORTHO05D000067 5.8e-07 58.2 93 34.4
AUR62037106 Chenopodium quinoa HOM05D009508 ORTHO05D000695 7.6e-07 57.8 111 34.2
Hund09722 Selenicereus undatus HOM05D020589 ORTHO05D010054 7.6e-07 57.8 56 42.9
CDE05G1292 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 1.0e-06 57.4 78 42.3
AUR62005535 Chenopodium quinoa HOM05D009508 ORTHO05D000695 1.0e-06 57.4 123 33.3
ECA238G1220 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.0e-06 57.4 69 37.7
Medtr1g013060 Medicago truncatula HOM05D000045 ORTHO05D010054 1.0e-06 57.4 63 41.3
TPR.G36565 Trifolium pratense HOM05D009041 ORTHO05D010054 1.0e-06 57.4 74 39.2
EL10Ac6g14847 Beta vulgaris HOM05D000045 ORTHO05D000067 1.3e-06 57.0 49 53.1
HanXRQChr03g0071931 Helianthus annuus HOM05D000385 ORTHO05D000269 1.3e-06 57.0 76 38.2
MD15G1227300 Malus domestica HOM05D000045 ORTHO05D000067 1.3e-06 57.0 81 35.8
ECA234G2985 Erigeron canadensis HOM05D003566 ORTHO05D005288 1.7e-06 56.6 69 37.7
ECA236G4481 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.7e-06 56.6 69 37.7
Os07g0615900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.7e-06 56.6 65 47.7
Hund08061 Selenicereus undatus HOM05D020589 ORTHO05D010054 1.7e-06 56.6 50 44.0
HPP92_013275 Vanilla planifolia HOM05D000045 ORTHO05D000067 1.7e-06 56.6 63 42.9
HPP92_019288 Vanilla planifolia HOM05D000045 ORTHO05D000067 1.7e-06 56.6 76 42.1
SGA_v2.0_scaffold278G46733 Striga asiatica HOM05D009041 ORTHO05D010054 2.2e-06 56.2 37 64.9
Nn5g31065 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.9e-06 55.8 70 40.0
Nn5g31066 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.9e-06 55.8 70 40.0
PSO170G0855 Papaver somniferum HOM05D000045 ORTHO05D000067 2.9e-06 55.8 83 33.7
QL07p012792 Quercus lobata HOM05D000045 ORTHO05D000067 2.9e-06 55.8 87 33.3
TAR376G0491 Trochodendron aralioides HOM05D000045 ORTHO05D000067 2.9e-06 55.8 70 40.0
Lalb_Chr09g0324891 Lupinus albus HOM05D000045 ORTHO05D000067 3.8e-06 55.5 87 35.6
Aqoxy3G00990 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.9e-06 55.1 61 42.6
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.9e-06 55.1 61 42.6
Aqoxy5G01360 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.9e-06 55.1 85 36.5
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 4.9e-06 55.1 61 42.6
AUR62038637 Chenopodium quinoa HOM05D009508 ORTHO05D000695 4.9e-06 55.1 100 35.0
Hma1.2p1_0032F.1_g018650 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 4.9e-06 55.1 70 40.0
Os03g0255400 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000611 4.9e-06 55.1 78 34.6
PSO017G4008 Papaver somniferum HOM05D000045 ORTHO05D000067 4.9e-06 55.1 67 40.3
PSO170G0991 Papaver somniferum HOM05D000045 ORTHO05D000067 4.9e-06 55.1 67 40.3
PSO170G6512 Papaver somniferum HOM05D000045 ORTHO05D000067 4.9e-06 55.1 59 47.5
PSO210G0651 Papaver somniferum HOM05D000045 ORTHO05D000067 4.9e-06 55.1 59 47.5
EL10Ac5g11372 Beta vulgaris HOM05D000045 ORTHO05D000067 6.5e-06 54.7 63 38.1
PSO017G1954 Papaver somniferum HOM05D000045 ORTHO05D000067 6.5e-06 54.7 83 32.5
Atru.chr1.251 Acer truncatum HOM05D009041 ORTHO05D019408 8.4e-06 54.3 74 39.2
Aqoxy7G02429 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 8.4e-06 54.3 61 41.0
EL10Ac8g19586 Beta vulgaris HOM05D010653 ORTHO05D010054 8.4e-06 54.3 89 32.6
Glyma.01G000600 Glycine max HOM05D000045 ORTHO05D000067 8.4e-06 54.3 79 35.4
PSO339G0029 Papaver somniferum HOM05D000045 ORTHO05D000067 8.4e-06 54.3 95 32.6


User provided reference genes

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