Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 0.0e+00 1198.3 612 100.0
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 1.7e-191 673.3 650 58.9
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 5.8e-179 631.7 640 54.8
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 6.9e-172 608.2 657 54.9
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 8.4e-162 574.7 630 53.8
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 1.8e-148 530.4 644 47.4
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.7e-138 497.3 646 46.3
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 1.6e-136 490.7 644 45.2
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 3.6e-136 489.6 650 45.1
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 7.9e-136 488.4 655 44.9
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 2.3e-135 486.9 644 45.2
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 5.7e-134 482.3 644 44.7
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 9.7e-134 481.5 659 44.9
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 2.8e-133 479.9 655 45.0
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 3.7e-133 479.6 642 43.9
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 1.4e-132 477.6 623 45.9
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.7e-130 470.7 654 44.5
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 1.4e-129 467.6 638 43.6
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 1.6e-128 464.2 647 43.0
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 1.8e-127 460.7 647 43.9
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 2.3e-127 460.3 641 42.1
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 6.7e-127 458.8 641 42.4
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 2.0e-126 457.2 645 42.3
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 2.6e-126 456.8 649 41.9
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 7.4e-126 455.3 649 43.0
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.8e-125 453.4 640 43.9
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 3.7e-125 453.0 711 41.9
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 8.2e-125 451.8 645 42.2
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.8e-124 450.7 640 43.4
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 3.1e-124 449.9 644 42.9
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 5.3e-124 449.1 637 42.5
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 2.0e-123 447.2 645 42.5
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 2.0e-123 447.2 644 42.1
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 1.5e-121 441.0 636 42.9
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 2.5e-121 440.3 618 43.9
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 4.2e-121 439.5 643 41.2
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 7.2e-121 438.7 642 40.5
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 1.4e-119 434.5 641 41.2
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 4.0e-119 433.0 670 41.3
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 4.0e-119 433.0 640 40.9
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 5.2e-119 432.6 650 42.0
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.2e-118 431.4 668 41.0
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 3.3e-118 429.9 668 41.0
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 3.3e-118 429.9 635 41.7
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 3.3e-118 429.9 622 43.7
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.7e-117 427.6 652 40.6
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 3.7e-117 426.4 635 42.4
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 8.2e-117 425.2 637 41.4
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 3.5e-115 419.9 639 41.3
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 5.9e-115 419.1 666 38.9
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 1.3e-114 417.9 615 43.1
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 8.5e-114 415.2 642 40.2
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 2.5e-113 413.7 645 42.8
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 4.2e-113 412.9 595 43.0
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 7.2e-113 412.1 694 38.5
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 2.1e-112 410.6 610 42.8
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 2.7e-112 410.2 638 41.4
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 4.8e-109 399.4 647 40.2
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 1.8e-108 397.5 618 41.3
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 3.1e-108 396.7 646 37.9
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 5.4e-108 396.0 684 37.6
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 5.9e-107 392.5 644 38.2
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 5.0e-106 389.4 631 39.3
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 2.5e-105 387.1 668 38.9
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 2.8e-104 383.6 627 41.5
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 1.0e-103 381.7 647 38.5
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.8e-103 380.9 647 38.2
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 5.2e-103 379.4 624 40.2
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.2e-102 378.3 509 43.6
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 1.6e-99 367.9 638 38.2
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 1.7e-98 364.4 638 37.6
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 1.1e-97 361.7 637 37.0
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 2.5e-97 360.5 632 37.5
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 7.5e-94 349.0 651 34.9
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 7.0e-92 342.4 660 35.3
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 3.0e-90 337.0 661 35.4
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 2.5e-89 334.0 659 35.4
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.5e-89 334.0 633 36.0
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.2e-88 331.6 660 34.8
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 8.0e-88 328.9 667 34.5
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.1e-87 328.6 427 45.0
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 3.1e-87 327.0 513 38.4
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 8.9e-87 325.5 628 36.6
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 2.9e-85 320.5 544 37.7
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 4.6e-83 313.2 522 37.9
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.7e-82 311.2 384 46.6
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 3.3e-81 307.0 515 36.5
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 1.1e-79 302.0 658 33.3
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 3.7e-77 293.5 497 36.4
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 6.0e-75 286.2 643 33.0
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.2e-72 278.5 619 32.3
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 9.9e-70 268.9 578 34.1
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.4e-68 264.2 426 41.3
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.2e-68 263.8 430 40.5
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 2.7e-67 260.8 412 38.8
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.1e-63 247.3 424 39.4
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 9.3e-52 209.1 408 36.3
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 2.3e-50 204.5 390 39.0
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 8.1e-48 196.1 501 31.7
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.1e-47 195.7 409 36.2
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 1.2e-46 192.2 318 39.6
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 1.0e-42 179.1 299 38.8
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 8.4e-37 159.5 152 52.6
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 4.6e-35 153.7 547 25.8
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 1.6e-32 145.2 274 34.3
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 1.1e-31 142.5 173 46.8
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 5.0e-29 133.7 143 51.0
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 7.2e-28 129.8 622 25.1
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 5.1e-26 123.6 651 23.3
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 6.3e-24 116.7 293 30.4
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.4e-23 115.5 552 22.6
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 2.4e-23 114.8 685 22.8
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 8.5e-21 106.3 107 56.1
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.0e-18 97.8 80 58.8
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 5.2e-10 70.5 135 33.3
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 3.3e-09 67.8 71 46.5


User provided reference genes

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