Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 3.3e-161 571.6 280 100.0
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 5.2e-50 202.2 127 78.7
SGA_v2.0_scaffold18G08304 Striga asiatica HOM05D010621 ORTHO05D000126 1.4e-26 124.4 213 39.9
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 5.4e-23 112.5 325 27.1
SGA_v2.0_scaffold73G24374 Striga asiatica HOM05D010621 ORTHO05D000126 8.9e-18 95.1 271 29.9
SGA_v2.0_scaffold42G16140 Striga asiatica HOM05D010621 ORTHO05D000004 1.5e-17 94.4 172 36.6
SGA_v2.0_scaffold290G47309 Striga asiatica HOM05D010621 ORTHO05D402271 1.3e-16 91.3 70 70.0
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 2.2e-16 90.5 92 46.7
SGA_v2.0_scaffold225G43070 Striga asiatica HOM05D000003 ORTHO05D000004 1.6e-14 84.3 92 39.1
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 3.5e-14 83.2 130 39.2
SGA_v2.0_scaffold830G53648 Striga asiatica HOM05D023122 ORTHO05D010636 4.6e-14 82.8 92 39.1
SGA_v2.0_scaffold124G33597 Striga asiatica HOM05D010621 ORTHO05D000004 7.8e-14 82.0 91 38.5
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 1.3e-13 81.3 133 36.8
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 3.9e-13 79.7 125 32.0
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 3.9e-13 79.7 188 30.3
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 5.1e-13 79.3 116 34.5
SGA_v2.0_scaffold332G48961 Striga asiatica HOM05D010621 ORTHO05D000126 6.6e-13 79.0 132 37.9
SGA_v2.0_scaffold283G46955 Striga asiatica HOM05D010621 ORTHO05D000126 1.1e-12 78.2 97 42.3
SGA_v2.0_scaffold56G20035 Striga asiatica HOM05D010621 ORTHO05D000126 1.1e-12 78.2 109 42.2
SGA_v2.0_scaffold244G44341 Striga asiatica HOM05D000003 ORTHO05D000004 1.5e-12 77.8 91 40.7
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 3.3e-12 76.6 108 39.8
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 2.8e-11 73.6 85 44.7
SGA_v2.0_scaffold66G22256 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-10 71.6 85 37.6
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 1.4e-10 71.2 90 36.7
SGA_v2.0_scaffold22G09699 Striga asiatica HOM05D000003 ORTHO05D000004 1.8e-10 70.9 91 38.5
SGA_v2.0_scaffold234G43650 Striga asiatica HOM05D037634 ORTHO05D000126 1.8e-10 70.9 115 34.8
SGA_v2.0_scaffold208G41982 Striga asiatica HOM05D009140 ORTHO05D010636 2.4e-10 70.5 99 38.4
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 5.3e-10 69.3 215 26.0
SGA_v2.0_scaffold122G33296 Striga asiatica HOM05D000003 ORTHO05D000004 2.0e-09 67.4 92 35.9
SGA_v2.0_scaffold14G06828 Striga asiatica HOM05D002039 ORTHO05D005834 2.6e-09 67.0 75 40.0
Aqoxy1G03329 Aquilegia oxysepala HOM05D000003 ORTHO05D018414 3.4e-09 66.6 93 38.7
SGA_v2.0_scaffold19G08685 Striga asiatica HOM05D017992 ORTHO05D000126 3.4e-09 66.6 85 38.8
SGA_v2.0_scaffold241G44220 Striga asiatica HOM05D000003 ORTHO05D000004 5.8e-09 65.9 92 33.7
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 5.8e-09 65.9 92 31.5
SGA_v2.0_scaffold7G03810 Striga asiatica HOM05D010621 ORTHO05D000126 5.8e-09 65.9 109 36.7
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 7.6e-09 65.5 118 33.1
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 9.9e-09 65.1 52 50.0
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.7e-08 64.3 73 42.5
SGA_v2.0_scaffold145G36011 Striga asiatica HOM05D009140 ORTHO05D010636 1.7e-08 64.3 92 38.0
TWI31G0724 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.2e-08 63.9 95 37.9
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.9e-08 63.5 91 35.2
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 2.9e-08 63.5 91 40.7
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.8e-08 63.2 52 40.4
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 3.8e-08 63.2 91 33.0
Rhsim09G0106200 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.9e-08 62.8 73 37.0
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 6.4e-08 62.4 51 47.1
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 6.4e-08 62.4 92 34.8
SGA_v2.0_scaffold15G07258 Striga asiatica HOM05D009140 ORTHO05D010636 8.4e-08 62.0 86 33.7
SGA_v2.0_scaffold54G19489 Striga asiatica HOM05D010621 ORTHO05D000126 8.4e-08 62.0 116 34.5
SGA_v2.0_scaffold67G22785 Striga asiatica HOM05D010565 ORTHO05D011213 8.4e-08 62.0 47 57.4
SGA_v2.0_scaffold72G24063 Striga asiatica HOM05D000047 ORTHO05D000044 8.4e-08 62.0 80 38.8
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.4e-07 61.2 85 37.6
PSO478G5133 Papaver somniferum HOM05D008740 ORTHO05D006738 1.4e-07 61.2 89 41.6
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.4e-07 61.2 91 35.2
SGA_v2.0_scaffold232G43493 Striga asiatica HOM05D010621 ORTHO05D000126 1.4e-07 61.2 96 36.5
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 2.4e-07 60.5 62 38.7
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 2.4e-07 60.5 62 38.7
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.4e-07 60.5 72 41.7
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 3.2e-07 60.1 78 37.2
PSO478G1611 Papaver somniferum HOM05D007919 ORTHO05D006738 4.2e-07 59.7 90 27.8
SGA_v2.0_scaffold231G43436 Striga asiatica HOM05D015799 ORTHO05D010636 4.2e-07 59.7 100 30.0
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 5.4e-07 59.3 50 48.0
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 5.4e-07 59.3 65 40.0
PSO478G1708 Papaver somniferum HOM05D000003 ORTHO05D006738 5.4e-07 59.3 93 36.6
PSO675G2167 Papaver somniferum HOM05D007919 ORTHO05D006738 5.4e-07 59.3 96 32.3
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 5.4e-07 59.3 92 32.6
SGA_v2.0_scaffold142G35659 Striga asiatica HOM05D016777 ORTHO05D026198 7.1e-07 58.9 93 31.2
QL02p011410 Quercus lobata HOM05D000003 ORTHO05D000004 9.3e-07 58.5 92 30.4
SGA_v2.0_scaffold14G07069 Striga asiatica HOM05D000367 ORTHO05D002159 9.3e-07 58.5 110 33.6
SGA_v2.0_scaffold3G01490 Striga asiatica HOM05D030754 ORTHO05D000004 9.3e-07 58.5 82 36.6
TWI38G2234 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 9.3e-07 58.5 88 34.1
Aa31LG8G12860 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-06 58.2 91 35.2
RhsimUnG0169300 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.2e-06 58.2 85 37.6
RcHm_v2.0_Chr4g0410641 Rosa chinensis HOM05D000003 ORTHO05D000004 1.2e-06 58.2 90 34.4
SGA_v2.0_scaffold11G05749 Striga asiatica HOM05D017992 ORTHO05D000126 1.2e-06 58.2 115 33.0
SGA_v2.0_scaffold141G35547 Striga asiatica HOM05D010621 ORTHO05D010215 1.2e-06 58.2 76 40.8
TWI31G0369 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.2e-06 58.2 120 31.7
Atru.chr8.822 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 57.8 66 40.9
Manes.18G060301 Manihot esculenta HOM05D000003 ORTHO05D000004 1.6e-06 57.8 91 31.9
SGA_v2.0_scaffold23G10123 Striga asiatica HOM05D009140 ORTHO05D010636 1.6e-06 57.8 54 44.4
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 1.6e-06 57.8 138 36.2
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-06 57.0 94 31.9
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.7e-06 57.0 63 41.3
TAR121G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.7e-06 57.0 88 28.4
TAR133G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.7e-06 57.0 92 31.5
SGA_v2.0_scaffold161G37849 Striga asiatica HOM05D025911 ORTHO05D000006 3.5e-06 56.6 78 39.7
SGA_v2.0_scaffold64G21923 Striga asiatica HOM05D010621 ORTHO05D000126 3.5e-06 56.6 120 35.0
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 3.5e-06 56.6 115 34.8
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.6e-06 56.2 92 38.0
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.6e-06 56.2 50 48.0
RcHm_v2.0_Chr4g0398671 Rosa chinensis HOM05D000003 ORTHO05D010102 4.6e-06 56.2 90 32.2
Rhsim03G0129300 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.0e-06 55.8 66 36.4
Rhsim04G0211900 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.0e-06 55.8 91 29.7
SGA_v2.0_scaffold139G35402 Striga asiatica HOM05D010621 ORTHO05D000004 6.0e-06 55.8 62 37.1
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.9e-06 55.5 91 31.9
FvH4_5g06193 Fragaria vesca HOM05D000003 ORTHO05D015112 7.9e-06 55.5 86 33.7
Lj4C35T6 Lonicera japonica HOM05D000003 ORTHO05D000126 7.9e-06 55.5 65 43.1
Lj8C13T6 Lonicera japonica HOM05D000003 ORTHO05D000126 7.9e-06 55.5 51 51.0
Manes.06G094851 Manihot esculenta HOM05D000003 ORTHO05D000004 7.9e-06 55.5 92 33.7
QL05p047317 Quercus lobata HOM05D000003 ORTHO05D000004 7.9e-06 55.5 93 31.2
SGA_v2.0_scaffold104G30166 Striga asiatica HOM05D000003 ORTHO05D000004 7.9e-06 55.5 89 33.7
SGA_v2.0_scaffold12G06017 Striga asiatica HOM05D009140 ORTHO05D010636 7.9e-06 55.5 83 32.5
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 7.9e-06 55.5 106 30.2


User provided reference genes

Program Settings