Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold127G34044 Striga asiatica HOM05D001520 ORTHO05D398968 5.6e-59 230.7 114 100.0
FAN16G3511 Fragaria x ananassa HOM05D001520 ORTHO05D001373 1.3e-10 70.1 69 58.0
FvH4_3g31140 Fragaria vesca HOM05D016449 ORTHO05D001373 2.8e-10 68.9 69 58.0
FAN21G3490 Fragaria x ananassa HOM05D001520 ORTHO05D001373 2.8e-10 68.9 69 58.0
Cc01_g10550 Coffea canephora HOM05D001520 ORTHO05D001373 3.6e-10 68.6 75 61.3
Nitab4.5_0002044g0010 Nicotiana tabacum HOM05D001520 ORTHO05D001373 6.2e-10 67.8 68 54.4
CSS0036444 Camellia sinensis var. sinensis HOM05D001520 ORTHO05D001373 8.1e-10 67.4 69 60.9
ECA248G3335 Erigeron canadensis HOM05D001520 ORTHO05D001373 1.4e-09 66.6 66 56.1
Nitab4.5_0000106g0420 Nicotiana tabacum HOM05D001520 ORTHO05D001373 4.0e-09 65.1 72 55.6
Oeu018374.1 Olea europaea HOM05D001520 ORTHO05D001373 6.9e-09 64.3 75 54.7
PGSC0003DMG400007162 Solanum tuberosum HOM05D001520 ORTHO05D001373 1.2e-08 63.5 68 57.4
Prupe.6G108500 Prunus persica HOM05D001520 ORTHO05D001373 2.0e-08 62.8 70 57.1
RcHm_v2.0_Chr5g0057771 Rosa chinensis HOM05D001520 ORTHO05D001373 4.5e-08 61.6 69 55.1
Oeu018482.1 Olea europaea HOM05D001520 ORTHO05D001373 5.8e-08 61.2 75 53.3
Dinv34703 Davidia involucrata HOM05D001520 ORTHO05D001373 1.3e-07 60.1 74 51.4
Prupe.6G108300 Prunus persica HOM05D001520 ORTHO05D001373 1.3e-07 60.1 72 55.6
RcHm_v2.0_Chr5g0057781 Rosa chinensis HOM05D001520 ORTHO05D001373 1.3e-07 60.1 69 53.6
TAR623G1087 Trochodendron aralioides HOM05D001520 ORTHO05D001373 1.3e-07 60.1 74 54.1
CAN.G1755.6 Capsicum annuum HOM05D001520 ORTHO05D001373 1.7e-07 59.7 68 57.4
Migut.N02572 Erythranthe guttata HOM05D001520 ORTHO05D001373 1.7e-07 59.7 76 52.6
Hma1.2p1_0344F.1_g131070 Hydrangea macrophylla HOM05D001520 ORTHO05D001373 1.7e-07 59.7 84 48.8
Actinidia07172 Actinidia chinensis HOM05D004760 ORTHO05D006114 2.2e-07 59.3 69 58.0
DCAR_006107 Daucus carota HOM05D001520 ORTHO05D001373 2.2e-07 59.3 61 60.7
GSVIVG01031507001 Vitis vinifera HOM05D001520 ORTHO05D001373 2.9e-07 58.9 70 55.7
MD00G1033700 Malus domestica HOM05D001520 ORTHO05D001373 3.8e-07 58.5 71 57.7
QL01p015848 Quercus lobata HOM05D001520 ORTHO05D001373 3.8e-07 58.5 75 52.0
CiPaw.13G118700 Carya illinoinensis HOM05D001520 ORTHO05D001373 4.9e-07 58.2 73 54.8
MELO3C026914.2 Cucumis melo HOM05D001520 ORTHO05D001373 4.9e-07 58.2 78 53.8
Rhsim01G0212200 Rhododendron simsii HOM05D001520 ORTHO05D001373 6.4e-07 57.8 84 51.2
ClCG03G002720 Citrullus lanatus HOM05D001520 ORTHO05D001373 8.4e-07 57.4 86 43.0
Duzib168G1009 Durio zibethinus HOM05D001520 ORTHO05D001373 8.4e-07 57.4 74 52.7
CSS0032131 Camellia sinensis var. sinensis HOM05D001520 ORTHO05D001373 1.1e-06 57.0 73 52.1
COL.COLO4_34700 Corchorus olitorius HOM05D001520 ORTHO05D001373 1.1e-06 57.0 79 53.2
Ciclev10030059m.g Citrus clementina HOM05D001520 ORTHO05D001373 1.4e-06 56.6 72 50.0
HanXRQChr01g0017891 Helianthus annuus HOM05D001520 ORTHO05D001373 1.9e-06 56.2 70 50.0
HanXRQChr01g0017911 Helianthus annuus HOM05D001520 ORTHO05D001373 1.9e-06 56.2 70 50.0
Glyma.13G323300 Glycine max HOM05D001520 ORTHO05D001373 2.4e-06 55.8 60 55.0
Lsat_1_v5_gn_1_63001 Lactuca sativa HOM05D001520 ORTHO05D001373 2.4e-06 55.8 70 51.4
Nitab4.5_0002186g0060 Nicotiana tabacum HOM05D001520 ORTHO05D001373 2.4e-06 55.8 74 55.4
Prupe.6G108400 Prunus persica HOM05D001520 ORTHO05D001373 2.4e-06 55.8 72 54.2
TPR.G11527 Trifolium pratense HOM05D001520 ORTHO05D001373 2.4e-06 55.8 95 47.4
Solyc11g069093.1 Solanum lycopersicum HOM05D001520 ORTHO05D001373 3.2e-06 55.5 75 50.7
Sopen11g027820 Solanum pennellii HOM05D001520 ORTHO05D001373 3.2e-06 55.5 75 50.7
CsaV3_6G014200 Cucumis sativus L. HOM05D001520 ORTHO05D001373 4.2e-06 55.1 78 52.6
HanXRQChr13g0396601 Helianthus annuus HOM05D001520 ORTHO05D001373 4.2e-06 55.1 74 51.4
Phvul.005G131801 Phaseolus vulgaris HOM05D001520 ORTHO05D001373 4.2e-06 55.1 82 45.1
TAR633G0735 Trochodendron aralioides HOM05D001520 ORTHO05D001373 4.2e-06 55.1 72 52.8
Duzib170G1023 Durio zibethinus HOM05D001520 ORTHO05D001373 5.5e-06 54.7 74 51.4
ECA233G1003 Erigeron canadensis HOM05D001520 ORTHO05D001373 5.5e-06 54.7 65 52.3
MD11G1145300 Malus domestica HOM05D001520 ORTHO05D001373 5.5e-06 54.7 84 47.6
Sed0013058 Sechium edule HOM05D001520 ORTHO05D001373 5.5e-06 54.7 81 40.7
ClCG02G021410 Citrullus lanatus HOM05D001520 ORTHO05D001373 9.3e-06 53.9 77 50.6


User provided reference genes

Program Settings