Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold126G33894 Striga asiatica HOM05D003921 ORTHO05D004394 2.6e-137 492.3 288 100.0
Migut.J00413 Erythranthe guttata HOM05D003921 ORTHO05D004394 7.1e-95 351.3 280 71.4
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla HOM05D003921 ORTHO05D004394 5.3e-82 308.5 260 64.6
Haze_17961 Corylus avellana HOM05D003921 ORTHO05D004394 1.2e-81 307.4 255 66.3
Cfa018157 Carpinus fangiana HOM05D003921 ORTHO05D004394 3.4e-81 305.8 255 66.3
Cpa.g.sc3.273 Carica papaya HOM05D003921 ORTHO05D004394 2.9e-80 302.8 257 64.6
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea HOM05D003921 ORTHO05D004394 2.5e-79 299.7 259 67.6
Potri.015G131200 Populus trichocarpa HOM05D003921 ORTHO05D004394 4.2e-79 298.9 262 63.7
unitig_744.g24672 Utricularia gibba HOM05D003921 ORTHO05D004394 3.6e-78 295.8 282 67.4
vmacro18851 Vaccinium macrocarpon HOM05D003921 ORTHO05D004394 4.6e-78 295.4 286 59.1
Thecc.03G161300 Theobroma cacao HOM05D003921 ORTHO05D004394 1.0e-77 294.3 290 57.9
Dinv22928 Davidia involucrata HOM05D003921 ORTHO05D004394 1.3e-77 293.9 261 63.2
Gohir.A07G039500 Gossypium hirsutum HOM05D003921 ORTHO05D004394 1.8e-77 293.5 282 58.9
Rhsim11G0028600 Rhododendron simsii HOM05D003921 ORTHO05D004394 3.0e-77 292.7 286 59.1
Solyc01g006170.4 Solanum lycopersicum HOM05D003921 ORTHO05D004394 3.9e-77 292.4 280 60.4
Lalb_Chr10g0096111 Lupinus albus HOM05D003921 ORTHO05D004394 5.1e-77 292.0 259 65.3
Sopen01g002180 Solanum pennellii HOM05D003921 ORTHO05D004394 1.5e-76 290.4 280 60.0
MBI05_g15474_MAGBIO Magnolia biondii HOM05D003921 ORTHO05D004394 2.5e-76 289.7 279 61.3
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 9.7e-76 287.7 281 65.8
Gorai.001G046600 Gossypium raimondii HOM05D003921 ORTHO05D004394 1.3e-75 287.3 282 58.9
PGSC0003DMG400032192 Solanum tuberosum HOM05D003921 ORTHO05D004394 1.3e-75 287.3 280 59.3
Nitab4.5_0005477g0070 Nicotiana tabacum HOM05D003921 ORTHO05D004394 2.2e-75 286.6 285 63.9
TPR.G27266 Trifolium pratense HOM05D003921 ORTHO05D004394 2.2e-75 286.6 285 64.2
Aa31LG5G22190 Aethionema arabicum HOM05D003921 ORTHO05D004394 3.7e-75 285.8 256 62.5
Nitab4.5_0001620g0040 Nicotiana tabacum HOM05D003921 ORTHO05D004394 3.7e-75 285.8 267 67.4
Gohir.D07G043600 Gossypium hirsutum HOM05D003921 ORTHO05D004394 4.8e-75 285.4 282 58.5
PGSC0003DMG400032141 Solanum tuberosum HOM05D003921 ORTHO05D004394 4.8e-75 285.4 283 57.2
Cc02_g03920 Coffea canephora HOM05D003921 ORTHO05D004394 8.2e-75 284.6 281 65.1
QL02p008779 Quercus lobata HOM05D003921 ORTHO05D004394 8.2e-75 284.6 257 65.4
Solyc01g006090.3 Solanum lycopersicum HOM05D003921 ORTHO05D004394 8.2e-75 284.6 276 58.3
Aa31LG5G22200 Aethionema arabicum HOM05D003921 ORTHO05D004394 1.1e-74 284.3 256 62.5
RcHm_v2.0_Chr1g0375101 Rosa chinensis HOM05D003921 ORTHO05D004394 1.1e-74 284.3 259 64.5
Lsat_1_v5_gn_6_96180 Lactuca sativa HOM05D003921 ORTHO05D004394 2.4e-74 283.1 261 60.5
CDE07G0272 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 4.1e-74 282.3 256 59.4
CSS0011813 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 5.3e-74 282.0 267 67.4
Rhsim07G0193400 Rhododendron simsii HOM05D003921 ORTHO05D004394 6.9e-74 281.6 250 62.4
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.5e-73 280.4 258 65.1
ClCG01G005120 Citrullus lanatus HOM05D003921 ORTHO05D004394 3.4e-73 279.3 257 63.8
FvH4_7g28160 Fragaria vesca HOM05D003921 ORTHO05D004394 3.4e-73 279.3 259 64.9
Glyma.20G233800 Glycine max HOM05D003921 ORTHO05D004394 3.4e-73 279.3 259 67.2
MELO3C005417.2 Cucumis melo HOM05D003921 ORTHO05D004394 1.7e-72 276.9 260 60.4
Phvul.007G180200 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 2.9e-72 276.2 286 62.9
CsaV3_5G005400 Cucumis sativus L. HOM05D003921 ORTHO05D004394 1.4e-71 273.9 265 59.2
Ca_20760_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.9e-71 273.5 258 69.0
Phvul.007G264700 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 2.5e-71 273.1 286 62.2
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 4.2e-71 272.3 280 58.9
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 4.2e-71 272.3 246 65.9
Sed0026547 Sechium edule HOM05D003921 ORTHO05D004394 5.5e-71 271.9 264 64.0
CSS0049059 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 7.2e-71 271.6 267 59.6
Carub.0003s2281 Capsella rubella HOM05D003921 ORTHO05D004394 7.2e-71 271.6 257 60.3
VMungo0720G1998 Vigna mungo HOM05D003921 ORTHO05D004394 7.2e-71 271.6 259 66.8
TAR626G1747 Trochodendron aralioides HOM05D003921 ORTHO05D004394 9.4e-71 271.2 262 66.8
Ca_31306_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.2e-70 270.8 258 68.6
Prupe.2G282000 Prunus persica HOM05D003921 ORTHO05D004394 1.2e-70 270.8 257 66.1
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 2.1e-70 270.0 242 66.5
THA.LOC104808294 Tarenaya hassleriana HOM05D003921 ORTHO05D004394 2.1e-70 270.0 254 59.4
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.6e-70 269.2 242 66.1
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.6e-70 269.2 242 66.1
TWI14G0513 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 3.6e-70 269.2 259 60.2
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 6.1e-70 268.5 242 66.1
TWI23G0331 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 6.1e-70 268.5 259 59.8
Sed0011284 Sechium edule HOM05D003921 ORTHO05D004394 7.9e-70 268.1 284 60.6
AT3G22660 Arabidopsis thaliana HOM05D003921 ORTHO05D004394 1.0e-69 267.7 257 59.5
Ciclev10005521m.g Citrus clementina HOM05D003921 ORTHO05D004394 1.8e-69 266.9 259 59.5
TAR636G2246 Trochodendron aralioides HOM05D003921 ORTHO05D004394 6.7e-69 265.0 262 59.5
CiPaw.15G078700 Carya illinoinensis HOM05D003921 ORTHO05D004394 1.1e-68 264.2 260 64.6
PSO478G1412 Papaver somniferum HOM05D003921 ORTHO05D004394 1.5e-68 263.8 281 60.9
ECA234G0656 Erigeron canadensis HOM05D003921 ORTHO05D004394 2.6e-68 263.1 261 57.9
A05p26040 Brassica napus HOM05D003921 ORTHO05D004394 3.3e-68 262.7 257 59.1
BraA01t03380Z Brassica rapa HOM05D003921 ORTHO05D004394 3.3e-68 262.7 259 59.5
BraA05t21488Z Brassica rapa HOM05D003921 ORTHO05D004394 3.3e-68 262.7 257 59.1
Aqoxy1G01610 Aquilegia oxysepala HOM05D003921 ORTHO05D004394 4.4e-68 262.3 279 55.2
A01p32500 Brassica napus HOM05D003921 ORTHO05D004394 4.4e-68 262.3 259 59.5
PSO782G4293 Papaver somniferum HOM05D003921 ORTHO05D004394 4.4e-68 262.3 281 60.5
Thhalv10021245m.g Eutrema salsugineum HOM05D003921 ORTHO05D004394 5.7e-68 261.9 255 58.0
Lj3g0006890 Lotus japonicus HOM05D003921 ORTHO05D004394 7.4e-68 261.5 257 58.4
Duzib084G0641 Durio zibethinus HOM05D003921 ORTHO05D004394 1.3e-67 260.8 281 54.8
Glyma.10G154500 Glycine max HOM05D003921 ORTHO05D004394 1.3e-67 260.8 259 61.4
AL3G36960 Arabidopsis lyrata HOM05D003921 ORTHO05D004394 2.2e-67 260.0 257 59.1
PGR042G0045 Punica granatum HOM05D003921 ORTHO05D004394 2.8e-67 259.6 254 62.6
BcaB04g20506 Brassica carinata HOM05D003921 ORTHO05D004394 3.7e-67 259.2 260 59.2
BraA03t13433Z Brassica rapa HOM05D003921 ORTHO05D004394 3.7e-67 259.2 260 59.2
Eucgr.E01709 Eucalyptus grandis HOM05D003921 ORTHO05D004394 6.3e-67 258.5 262 56.9
BcaB06g26378 Brassica carinata HOM05D003921 ORTHO05D004394 8.2e-67 258.1 257 58.4
A03p42870 Brassica napus HOM05D003921 ORTHO05D004394 8.2e-67 258.1 259 59.1
MD07G1257700 Malus domestica HOM05D003921 ORTHO05D004394 1.1e-66 257.7 283 64.3
MD01G1185600 Malus domestica HOM05D003921 ORTHO05D004394 1.4e-66 257.3 281 63.0
Manes.06G137800 Manihot esculenta HOM05D003921 ORTHO05D004394 1.4e-66 257.3 282 54.6
BcaC01g03432 Brassica carinata HOM05D003921 ORTHO05D004394 1.8e-66 256.9 261 58.2
Lalb_Chr06g0167921 Lupinus albus HOM05D003921 ORTHO05D004394 2.4e-66 256.5 257 58.0
HanXRQChr08g0224051 Helianthus annuus HOM05D003921 ORTHO05D004394 3.1e-66 256.1 261 56.3
Sc03g0002240 Simmondsia chinensis HOM05D003921 ORTHO05D004394 3.1e-66 256.1 256 55.1
DCAR_020219 Daucus carota HOM05D003921 ORTHO05D004394 5.3e-66 255.4 262 59.2
BcaC09g49188 Brassica carinata HOM05D003921 ORTHO05D004394 6.9e-66 255.0 259 59.8
C01p41660 Brassica napus HOM05D003921 ORTHO05D004394 6.9e-66 255.0 259 59.8
BolC1t04121H Brassica oleracea HOM05D003921 ORTHO05D004394 6.9e-66 255.0 259 59.8
C03p52650 Brassica napus HOM05D003921 ORTHO05D004394 1.2e-65 254.2 261 57.9
HanXRQChr05g0141401 Helianthus annuus HOM05D003921 ORTHO05D004394 1.2e-65 254.2 261 55.9
Lj1P984T37 Lonicera japonica HOM05D003921 ORTHO05D004394 1.5e-65 253.8 262 55.0
Peaxi162Scf00441g00013 Petunia axillaris HOM05D003921 ORTHO05D004394 2.6e-65 253.1 262 58.4
Atru.chr1.637 Acer truncatum HOM05D003921 ORTHO05D004394 5.9e-65 251.9 260 60.0
BolC3t17533H Brassica oleracea HOM05D003921 ORTHO05D004394 7.7e-65 251.5 261 58.6
Lalb_Chr17g0338581 Lupinus albus HOM05D003921 ORTHO05D004394 7.7e-65 251.5 296 55.4
BcaC05g28029 Brassica carinata HOM05D003921 ORTHO05D004394 1.3e-64 250.8 257 64.6
BcaB04g19210 Brassica carinata HOM05D003921 ORTHO05D004394 2.2e-64 250.0 256 57.4
CSS0023430 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 2.2e-64 250.0 267 56.2
ATR0626G386 Amborella trichopoda HOM05D003921 ORTHO05D004394 2.9e-64 249.6 277 52.0
BolC5t32786H Brassica oleracea HOM05D003921 ORTHO05D004394 5.0e-64 248.8 257 64.2
CANSAT11G2317 Cannabis sativa HOM05D003921 ORTHO05D004394 5.0e-64 248.8 215 60.9
Sp3g20420 Schrenkiella parvula HOM05D003921 ORTHO05D004394 9.4e-63 244.6 256 56.2
Medtr5g028350 Medicago truncatula HOM05D003921 ORTHO05D004394 1.2e-62 244.2 281 59.4
CAN.G140.50 Capsicum annuum HOM05D003921 ORTHO05D004394 3.6e-62 242.7 264 59.5
EL10Ac4g09457 Beta vulgaris HOM05D003921 ORTHO05D004394 7.9e-62 241.5 251 54.6
Rhsim11G0028700 Rhododendron simsii HOM05D003921 ORTHO05D004394 2.6e-60 236.5 223 61.9
Ah.06g188100 Amaranthus hybridus HOM05D003921 ORTHO05D004394 9.7e-60 234.6 261 54.8
Dinv22984 Davidia involucrata HOM05D003921 ORTHO05D004394 2.2e-59 233.4 261 54.4
Ah.06g188120 Amaranthus hybridus HOM05D003921 ORTHO05D004394 6.3e-59 231.9 283 53.7
Zm00001eb235000 Zea mays HOM05D003921 ORTHO05D004394 1.1e-58 231.1 275 54.5
ECA233G5254 Erigeron canadensis HOM05D003921 ORTHO05D004394 1.4e-58 230.7 237 57.8
CARHR098540 Cardamine hirsuta HOM05D003921 ORTHO05D004394 1.8e-58 230.3 259 61.0
AUR62000393 Chenopodium quinoa HOM05D003921 ORTHO05D004394 1.8e-58 230.3 288 50.3
Nitab4.5_0000249g0460 Nicotiana tabacum HOM05D003921 ORTHO05D004394 5.9e-57 225.3 252 56.7
Medtr8g075400 Medicago truncatula HOM05D003921 ORTHO05D004394 1.7e-56 223.8 274 57.7
Psat2g139240 Pisum sativum HOM05D003921 ORTHO05D004394 1.7e-56 223.8 285 55.8
Zm00001eb104900 Zea mays HOM05D003921 ORTHO05D004394 5.0e-56 222.2 249 55.0
Ca_25165_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.9e-55 220.3 249 60.6
AUR62006749 Chenopodium quinoa HOM05D003921 ORTHO05D004394 7.2e-55 218.4 289 51.2
Ciclev10006627m.g Citrus clementina HOM05D003921 ORTHO05D004394 7.2e-55 218.4 271 55.4
FAN10G0556 Fragaria x ananassa HOM05D003921 ORTHO05D004394 4.0e-53 212.6 190 65.3
Ah.06g188150 Amaranthus hybridus HOM05D003921 ORTHO05D004394 6.7e-53 211.8 269 51.3
Sopen01g002090 Solanum pennellii HOM05D003921 ORTHO05D004394 8.8e-53 211.5 205 60.5
Oeu019922.1 Olea europaea HOM05D003921 ORTHO05D004394 2.2e-51 206.8 245 60.4
SHI13875 Sapria himalayana HOM05D003921 ORTHO05D004394 6.3e-51 205.3 250 53.2
Os07g0475800 Oryza sativa ssp. japonica HOM05D003921 ORTHO05D004394 7.0e-50 201.8 252 51.2
SMO174G0035 Selaginella moellendorffii HOM05D003921 ORTHO05D004394 6.5e-48 195.3 256 50.4
MSTRG.14093 Avicennia marina HOM05D003921 ORTHO05D004394 3.6e-46 189.5 168 76.8
CDE04G0151 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 1.0e-45 188.0 207 56.0
Oeu019920.1 Olea europaea HOM05D003921 ORTHO05D004394 5.7e-44 182.2 302 52.0
Pp3c6_25210 Physcomitrium patens HOM05D003921 ORTHO05D004394 1.8e-42 177.2 267 41.6
MSTRG.14095 Avicennia marina HOM05D003921 ORTHO05D004394 1.2e-41 174.5 169 66.3
Mapoly0140s0011 Marchantia polymorpha HOM05D003921 ORTHO05D004394 2.7e-41 173.3 238 46.2
Nitab4.5_0004389g0020 Nicotiana tabacum HOM05D003921 ORTHO05D004394 3.5e-41 172.9 260 44.6
Ca_27419_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 4.7e-38 162.5 180 68.3
Ah.06g188070 Amaranthus hybridus HOM05D003921 ORTHO05D004394 3.4e-36 156.4 157 57.3
MSTRG.5717 Avicennia marina HOM05D003921 ORTHO05D004394 3.7e-35 152.9 190 61.1
Nn1g08099 Nelumbo nucifera HOM05D003921 ORTHO05D004394 3.7e-35 152.9 125 64.0
DCAR_018123 Daucus carota HOM05D003921 ORTHO05D004394 8.3e-35 151.8 260 44.6
HPP92_008700 Vanilla planifolia HOM05D003921 ORTHO05D004394 9.2e-34 148.3 131 55.0
Oeu021724.1 Olea europaea HOM05D003921 ORTHO05D004394 1.2e-33 147.9 280 41.1
AagrBONN_evm.TU.Sc2ySwM_228.1082 Anthoceros agrestis HOM05D003921 ORTHO05D004394 5.0e-32 142.5 286 36.7
BcaC09g49189 Brassica carinata HOM05D003921 ORTHO05D004394 1.1e-31 141.4 152 61.2
Hund09280 Selenicereus undatus HOM05D003921 ORTHO05D004394 1.5e-31 141.0 168 53.0
Hund09282 Selenicereus undatus HOM05D003921 ORTHO05D004394 1.5e-31 141.0 168 53.0
Eucgr.K01460 Eucalyptus grandis HOM05D003921 ORTHO05D004394 2.3e-29 133.7 108 60.2
PRCOL_00003036 Prasinoderma coloniale HOM05D003921 ORTHO05D004394 3.0e-29 133.3 238 37.0
Nn1g01220 Nelumbo nucifera HOM05D003921 ORTHO05D004394 4.0e-29 132.9 125 54.4
Oeu023230.1 Olea europaea HOM05D003921 ORTHO05D004394 8.9e-29 131.7 282 36.5
CBR_g18581 Chara braunii HOM05D001161 ORTHO05D000497 7.5e-28 128.6 254 37.4
RcHm_v2.0_Chr5g0027461 Rosa chinensis HOM05D003921 ORTHO05D017011 6.4e-27 125.6 103 57.3
MCO16G303 Micromonas commoda HOM05D003921 ORTHO05D004394 8.6e-24 115.2 205 38.0
Cre07.g351750 Chlamydomonas reinhardtii HOM05D003921 ORTHO05D004394 1.5e-23 114.4 244 37.7
GSVIVG01018514001 Vitis vinifera HOM05D003921 ORTHO05D004394 4.7e-22 109.4 261 33.0
ATR0564G120 Amborella trichopoda HOM05D003921 ORTHO05D004394 1.0e-21 108.2 195 42.1
Actinidia25037 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.5e-20 104.4 93 58.1
Prupe.2G115300 Prunus persica HOM05D003921 ORTHO05D004394 2.6e-20 103.6 198 40.4
Actinidia31394 Actinidia chinensis HOM05D003921 ORTHO05D004394 2.2e-19 100.5 93 66.7
Nn4g26407 Nelumbo nucifera HOM05D003921 ORTHO05D004394 9.2e-18 95.1 141 43.3
Actinidia13554 Actinidia chinensis HOM05D003921 ORTHO05D004394 6.0e-17 92.4 63 69.8
Ca_29708_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 3.3e-15 86.7 81 66.7
Actinidia39598 Actinidia chinensis HOM05D003921 ORTHO05D004394 9.5e-15 85.1 88 56.8
Nn4g26401 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.4e-13 81.3 73 54.8
Gohir.D12G264333 Gossypium hirsutum HOM05D003921 ORTHO05D004394 4.0e-13 79.7 238 30.7
Ah.06g188080 Amaranthus hybridus HOM05D003921 ORTHO05D004394 5.8e-12 75.9 90 56.7
Ah.06g188140 Amaranthus hybridus HOM05D003921 ORTHO05D004394 3.7e-11 73.2 128 46.9
Gorai.008G283700 Gossypium raimondii HOM05D003921 ORTHO05D004394 1.9e-10 70.9 238 27.7
Dinv10307 Davidia involucrata HOM05D003921 ORTHO05D004394 2.1e-09 67.4 43 74.4
CDE08G0595 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 3.5e-09 66.6 115 45.2
Oeu039213.1 Olea europaea HOM05D003921 ORTHO05D004394 1.7e-08 64.3 57 64.9
FvH4_1g22470 Fragaria vesca HOM05D003475 ORTHO05D035452 1.1e-07 61.6 59 52.5
Prupe.2G115400 Prunus persica HOM05D003921 ORTHO05D004394 2.1e-06 57.4 61 55.7


User provided reference genes

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