Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold125G33711 Striga asiatica HOM05D005832 ORTHO05D007117 1.7e-85 319.7 217 100.0
MSTRG.8527 Avicennia marina HOM05D005832 ORTHO05D007117 5.2e-66 255.0 240 78.8
Dinv29254 Davidia involucrata HOM05D005832 ORTHO05D007117 3.3e-60 235.7 238 76.1
Oeu010700.1 Olea europaea HOM05D005832 ORTHO05D007117 9.6e-60 234.2 184 93.5
SalBow2G0471 Salvia bowleyana HOM05D005832 ORTHO05D007117 1.2e-59 233.8 235 77.4
Manes.01G039700 Manihot esculenta HOM05D005832 ORTHO05D007117 3.1e-58 229.2 239 74.1
CAN.G481.39 Capsicum annuum HOM05D005832 ORTHO05D007117 5.2e-58 228.4 214 79.9
Oeu055193.1 Olea europaea HOM05D005832 ORTHO05D007117 5.2e-58 228.4 262 59.9
PGSC0003DMG400018522 Solanum tuberosum HOM05D005832 ORTHO05D007117 6.9e-58 228.0 214 80.8
Cfa016207 Carpinus fangiana HOM05D005832 ORTHO05D007117 8.9e-58 227.6 237 75.1
ATR0680G157 Amborella trichopoda HOM05D005832 ORTHO05D007117 5.8e-57 224.9 185 88.6
Solyc03g082890.3 Solanum lycopersicum HOM05D005832 ORTHO05D007117 9.9e-57 224.2 214 79.9
Sopen03g022710 Solanum pennellii HOM05D005832 ORTHO05D007117 1.7e-56 223.4 215 78.6
MBI18_g01156_MAGBIO Magnolia biondii HOM05D005832 ORTHO05D007117 3.8e-56 222.2 186 88.7
AUR62006065 Chenopodium quinoa HOM05D005832 ORTHO05D007117 4.9e-56 221.9 184 89.1
TAR375G0053 Trochodendron aralioides HOM05D005832 ORTHO05D007117 4.9e-56 221.9 198 84.3
Haze_00242 Corylus avellana HOM05D005832 ORTHO05D007117 6.4e-56 221.5 237 73.8
Nn3g18931 Nelumbo nucifera HOM05D005832 ORTHO05D007117 6.4e-56 221.5 198 84.3
Actinidia06134 Actinidia chinensis HOM05D005832 ORTHO05D007117 8.4e-56 221.1 214 79.4
Cc02_g01260 Coffea canephora HOM05D005832 ORTHO05D007117 1.9e-55 219.9 184 89.7
COL.COLO4_16805 Corchorus olitorius HOM05D005832 ORTHO05D007117 2.4e-55 219.5 186 88.7
Haze_00239 Corylus avellana HOM05D005832 ORTHO05D007117 2.4e-55 219.5 237 73.8
Peaxi162Scf00740g00233 Petunia axillaris HOM05D005832 ORTHO05D007117 2.4e-55 219.5 184 89.1
Potri.012G018100 Populus trichocarpa HOM05D005832 ORTHO05D007117 4.2e-55 218.8 238 72.3
MELO3C019377.2 Cucumis melo HOM05D005832 ORTHO05D007117 5.4e-55 218.4 238 72.7
CDE09G0779 Ceratophyllum demersum HOM05D005832 ORTHO05D007117 7.1e-55 218.0 196 84.7
Eucgr.K00402 Eucalyptus grandis HOM05D005832 ORTHO05D007117 7.1e-55 218.0 195 73.8
Ciclev10021983m.g Citrus clementina HOM05D005832 ORTHO05D007117 2.1e-54 216.5 200 83.0
unitig_578.g16672 Utricularia gibba HOM05D005832 ORTHO05D007117 2.1e-54 216.5 212 79.2
GSVIVG01038586001 Vitis vinifera HOM05D005832 ORTHO05D007117 3.5e-54 215.7 237 72.6
AUR62035562 Chenopodium quinoa HOM05D005832 ORTHO05D007117 4.6e-54 215.3 184 88.0
Thecc.03G202400 Theobroma cacao HOM05D005832 ORTHO05D007117 4.6e-54 215.3 217 77.4
ClCG05G009090 Citrullus lanatus HOM05D005832 ORTHO05D007117 6.0e-54 214.9 238 72.7
Nitab4.5_0007100g0060 Nicotiana tabacum HOM05D005832 ORTHO05D007117 6.0e-54 214.9 239 72.0
QL09p007826 Quercus lobata HOM05D005832 ORTHO05D007117 6.0e-54 214.9 183 87.4
Migut.F01014 Erythranthe guttata HOM05D005832 ORTHO05D007117 7.8e-54 214.5 154 72.1
Atru.chr12.2262 Acer truncatum HOM05D005832 ORTHO05D007117 1.0e-53 214.2 240 71.2
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.0e-53 214.2 208 79.3
CiPaw.06G044600 Carya illinoinensis HOM05D005832 ORTHO05D007117 1.3e-53 213.8 238 71.4
Gohir.A09G185500 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.3e-53 213.8 200 82.5
CsaV3_3G019700 Cucumis sativus L. HOM05D005832 ORTHO05D007117 1.7e-53 213.4 186 86.0
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 3.0e-53 212.6 181 90.1
Sabra12G0014400 Salix brachista HOM05D005832 ORTHO05D007117 5.1e-53 211.8 184 87.0
TWI39G1154 Tripterygium wilfordii HOM05D005832 ORTHO05D007117 5.1e-53 211.8 184 85.9
Gorai.013G219100 Gossypium raimondii HOM05D005832 ORTHO05D007117 6.6e-53 211.5 186 61.3
Prupe.2G314300 Prunus persica HOM05D005832 ORTHO05D007117 1.1e-52 210.7 184 85.9
PGR142G2159 Punica granatum HOM05D005832 ORTHO05D007117 1.1e-52 210.7 184 87.0
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.5e-52 210.3 186 87.1
RcHm_v2.0_Chr1g0381721 Rosa chinensis HOM05D005832 ORTHO05D007117 1.9e-52 209.9 184 86.4
Duzib084G1042 Durio zibethinus HOM05D005832 ORTHO05D007117 2.5e-52 209.5 199 82.4
FvH4_7g32120 Fragaria vesca HOM05D005832 ORTHO05D007117 3.3e-52 209.1 184 85.9
FAN06G2446 Fragaria x ananassa HOM05D005832 ORTHO05D007117 3.3e-52 209.1 184 85.9
arahy.Tifrunner.gnm1.ann1.26JPZN Arachis hypogaea HOM05D005832 ORTHO05D007117 4.3e-52 208.8 228 74.1
HanXRQChr08g0225151 Helianthus annuus HOM05D005832 ORTHO05D007117 4.3e-52 208.8 213 79.8
Hma1.2p1_0591F.1_g185170 Hydrangea macrophylla HOM05D005832 ORTHO05D007117 5.6e-52 208.4 212 75.0
arahy.Tifrunner.gnm1.ann1.082NQD Arachis hypogaea HOM05D005832 ORTHO05D007117 7.3e-52 208.0 228 74.1
Gorai.007G219400 Gossypium raimondii HOM05D005832 ORTHO05D007117 9.6e-52 207.6 226 74.3
FAN10G0265 Fragaria x ananassa HOM05D005832 ORTHO05D007117 2.8e-51 206.1 184 85.9
HPP92_013004 Vanilla planifolia HOM05D005832 ORTHO05D007117 2.8e-51 206.1 197 79.2
PSO170G4678 Papaver somniferum HOM05D005832 ORTHO05D007117 1.1e-50 204.1 187 85.0
Gorai.004G199200 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.4e-50 203.0 186 70.4
Sed0026931 Sechium edule HOM05D005832 ORTHO05D007117 2.4e-50 203.0 186 83.9
Os10g0502000 Oryza sativa ssp. japonica HOM05D005832 ORTHO05D007117 4.0e-50 202.2 180 87.8
DCAR_020339 Daucus carota HOM05D005832 ORTHO05D007117 6.9e-50 201.4 205 76.6
MD07G1294700 Malus domestica HOM05D005832 ORTHO05D007117 6.9e-50 201.4 185 85.4
CANSAT21G0464 Cannabis sativa HOM05D005832 ORTHO05D007117 9.0e-50 201.1 218 72.5
Zm00001eb220820 Zea mays HOM05D005832 ORTHO05D007117 9.0e-50 201.1 180 87.8
FAN10G0314 Fragaria x ananassa HOM05D005832 ORTHO05D007117 1.2e-49 200.7 187 84.5
PSO063G3297 Papaver somniferum HOM05D005832 ORTHO05D007117 1.2e-49 200.7 187 84.0
Phvul.009G050400 Phaseolus vulgaris HOM05D005832 ORTHO05D007117 1.2e-49 200.7 183 86.3
Sc25g0000950 Simmondsia chinensis HOM05D005832 ORTHO05D007117 1.2e-49 200.7 200 79.5
ECA233G1427 Erigeron canadensis HOM05D005832 ORTHO05D007117 1.5e-49 200.3 183 84.7
Lj1g0002080 Lotus japonicus HOM05D005832 ORTHO05D007117 2.0e-49 199.9 183 86.3
Psat5g075600 Pisum sativum HOM05D005832 ORTHO05D007117 2.0e-49 199.9 183 85.8
Gorai.008G174000 Gossypium raimondii HOM05D005832 ORTHO05D007117 3.4e-49 199.1 186 84.4
Rhsim09G0206900 Rhododendron simsii HOM05D005832 ORTHO05D007117 3.4e-49 199.1 185 84.3
Lj3A899T66 Lonicera japonica HOM05D005832 ORTHO05D007117 4.5e-49 198.7 133 72.2
Medtr3g491890 Medicago truncatula HOM05D005832 ORTHO05D007117 5.8e-49 198.4 188 83.5
SEGI_24850 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 9.9e-49 197.6 201 75.6
VMungo1309G1177 Vigna mungo HOM05D005832 ORTHO05D007117 9.9e-49 197.6 183 85.8
vmacro10134 Vaccinium macrocarpon HOM05D005832 ORTHO05D007117 2.9e-48 196.1 234 69.2
TPR.G33655 Trifolium pratense HOM05D005832 ORTHO05D007117 3.8e-48 195.7 183 84.7
Ca_16726_v3 Cicer arietinum L. HOM05D005832 ORTHO05D007117 4.9e-48 195.3 183 85.8
Aa31LG3G9660 Aethionema arabicum HOM05D005832 ORTHO05D007117 6.4e-48 194.9 186 82.8
Glyma.06G131300 Glycine max HOM05D005832 ORTHO05D007117 8.4e-48 194.5 183 85.2
Lalb_Chr08g0240071 Lupinus albus HOM05D005832 ORTHO05D007117 8.4e-48 194.5 239 68.2
Gorai.006G202400 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.1e-47 194.1 240 69.2
MD01G1223900 Malus domestica HOM05D005832 ORTHO05D007117 1.1e-47 194.1 198 79.8
Glyma.04G233500 Glycine max HOM05D005832 ORTHO05D007117 1.9e-47 193.4 183 84.2
Gohir.D07G112932 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.4e-47 193.0 205 54.6
EL10Ac3g05248 Beta vulgaris HOM05D005832 ORTHO05D007117 5.4e-47 191.8 237 59.5
BcaC04g20449 Brassica carinata HOM05D005832 ORTHO05D007117 2.1e-46 189.9 215 72.1
BolC9t57215H Brassica oleracea HOM05D005832 ORTHO05D007117 2.1e-46 189.9 215 72.1
Thhalv10014535m.g Eutrema salsugineum HOM05D005832 ORTHO05D007117 2.1e-46 189.9 186 81.2
C09p43330 Brassica napus HOM05D005832 ORTHO05D007117 2.7e-46 189.5 215 72.1
Sp6g15630 Schrenkiella parvula HOM05D005832 ORTHO05D007117 3.5e-46 189.1 186 81.2
A10p10930 Brassica napus HOM05D005832 ORTHO05D007117 6.0e-46 188.3 216 72.2
BraA10t43184Z Brassica rapa HOM05D005832 ORTHO05D007117 1.0e-45 187.6 191 79.1
CARHR266630 Cardamine hirsuta HOM05D005832 ORTHO05D007117 3.0e-45 186.0 187 80.2
Carub.0008s1366 Capsella rubella HOM05D005832 ORTHO05D007117 6.7e-45 184.9 206 72.8
Gohir.A05G409400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.5e-44 183.7 104 86.5
Gohir.A10G001400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.5e-44 183.7 104 86.5
Gohir.D01G203700 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.5e-44 183.7 104 86.5
AT5G53490 Arabidopsis thaliana HOM05D005832 ORTHO05D007117 1.9e-44 183.3 204 74.0
THA.LOC104799961 Tarenaya hassleriana HOM05D005832 ORTHO05D007117 1.9e-44 183.3 186 80.6
BcaB08g35713 Brassica carinata HOM05D005832 ORTHO05D007117 2.5e-44 183.0 186 79.6
Ah.13g070460 Amaranthus hybridus HOM05D005832 ORTHO05D007117 5.6e-44 181.8 98 87.8
Gohir.D02G154600 Gossypium hirsutum HOM05D005832 ORTHO05D007117 7.4e-44 181.4 104 85.6
CSS0000669 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 2.1e-43 179.9 173 56.1
CSS0046458 Camellia sinensis var. sinensis HOM05D005832 ORTHO05D007117 2.1e-43 179.9 173 56.1
Gohir.D11G247000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.1e-43 179.9 104 83.7
Gohir.A13G227280 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.8e-43 179.5 104 84.6
Aqoxy6G02259 Aquilegia oxysepala HOM05D005832 ORTHO05D007117 8.1e-43 177.9 216 69.0
Gohir.A11G163501 Gossypium hirsutum HOM05D005832 ORTHO05D007117 8.1e-43 177.9 228 50.9
Gohir.D03G118200 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.1e-42 177.6 104 84.6
Gohir.D09G180400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 2.4e-42 176.4 230 68.3
AL8G28210 Arabidopsis lyrata HOM05D005832 ORTHO05D007117 3.8e-40 169.1 165 84.8
FAN03G0720 Fragaria x ananassa HOM05D005832 ORTHO05D007117 2.4e-39 166.4 158 86.7
Pp3c23_22190 Physcomitrium patens HOM05D005832 ORTHO05D007117 2.4e-39 166.4 187 73.3
Gohir.D12G161000 Gossypium hirsutum HOM05D005832 ORTHO05D007117 4.2e-39 165.6 230 49.6
FAN01G1435 Fragaria x ananassa HOM05D005832 ORTHO05D007117 5.5e-39 165.2 157 87.3
AagrBONN_evm.TU.Sc2ySwM_228.2510 Anthoceros agrestis HOM05D005832 ORTHO05D007117 6.2e-35 151.8 106 70.8
Gorai.004G257600 Gossypium raimondii HOM05D005832 ORTHO05D007117 6.9e-34 148.3 78 91.0
SMO111G0094 Selaginella moellendorffii HOM05D005832 ORTHO05D007117 1.3e-32 144.1 156 79.5
CBR_g40818 Chara braunii HOM05D005832 ORTHO05D007117 2.9e-32 142.9 108 66.7
Mapoly0014s0126 Marchantia polymorpha HOM05D005832 ORTHO05D007117 8.4e-32 141.4 190 63.2
Duzib205G0233 Durio zibethinus HOM05D005832 ORTHO05D007117 1.9e-31 140.2 214 65.4
SEGI_05976 Sequoiadendron giganteum HOM05D005832 ORTHO05D007117 6.7e-21 105.1 64 75.0
Actinidia18663 Actinidia chinensis HOM05D005832 ORTHO05D007117 5.7e-12 75.5 115 79.1
Cre09.g404000 Chlamydomonas reinhardtii HOM05D005832 ORTHO05D007117 1.3e-11 74.3 179 41.3
Cpa.g.sc3.109 Carica papaya HOM05D005832 ORTHO05D007117 2.1e-06 57.0 81 42.0


User provided reference genes

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