Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33597 Striga asiatica HOM05D010621 ORTHO05D000004 1.1e-62 243.0 116 100.0
SGA_v2.0_scaffold66G22256 Striga asiatica HOM05D000003 ORTHO05D000004 3.0e-20 102.1 96 47.9
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 7.0e-17 90.9 98 41.8
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 3.2e-14 82.0 139 36.0
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 3.2e-14 82.0 135 31.1
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 7.2e-14 80.9 91 38.5
SGA_v2.0_scaffold43G16397 Striga asiatica HOM05D009140 ORTHO05D010215 1.4e-12 76.6 83 39.8
SGA_v2.0_scaffold42G16140 Striga asiatica HOM05D010621 ORTHO05D000004 3.7e-10 68.6 75 40.0
SGA_v2.0_scaffold225G43070 Striga asiatica HOM05D000003 ORTHO05D000004 4.8e-10 68.2 88 31.8
SGA_v2.0_scaffold206G41847 Striga asiatica HOM05D000254 ORTHO05D010636 1.4e-09 66.6 108 32.4
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 1.8e-09 66.2 99 31.3
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 3.1e-09 65.5 72 37.5
SGA_v2.0_scaffold830G53648 Striga asiatica HOM05D023122 ORTHO05D010636 9.1e-09 63.9 93 28.0
SGA_v2.0_scaffold53G19333 Striga asiatica HOM05D009140 ORTHO05D010636 1.2e-08 63.5 94 31.9
QL03p029989 Quercus lobata HOM05D000003 ORTHO05D000004 1.6e-08 63.2 86 33.7
SGA_v2.0_scaffold141G35547 Striga asiatica HOM05D010621 ORTHO05D010215 1.6e-08 63.2 73 38.4
SGA_v2.0_scaffold14G06828 Striga asiatica HOM05D002039 ORTHO05D005834 5.9e-08 61.2 76 35.5
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.8e-07 58.5 94 29.8
PSO478G1708 Papaver somniferum HOM05D000003 ORTHO05D006738 3.8e-07 58.5 98 27.6
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.0e-07 58.2 86 32.6
FvH4_4g09142 Fragaria vesca HOM05D000003 ORTHO05D000004 8.6e-07 57.4 87 29.9
Rhsim01G0174200 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.6e-07 57.4 85 25.9
Aa31LG3G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-06 56.6 137 27.7
Aa31sc25G170 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-06 56.6 87 27.6
SGA_v2.0_scaffold145G36011 Striga asiatica HOM05D009140 ORTHO05D010636 1.5e-06 56.6 99 30.3
PSO675G2167 Papaver somniferum HOM05D007919 ORTHO05D006738 1.9e-06 56.2 95 26.3
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 1.9e-06 56.2 91 29.7
SGA_v2.0_scaffold208G41982 Striga asiatica HOM05D009140 ORTHO05D010636 2.5e-06 55.8 93 31.2
Aa31LG8G12860 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.3e-06 55.5 87 28.7
Aqoxy1G03329 Aquilegia oxysepala HOM05D000003 ORTHO05D018414 3.3e-06 55.5 74 39.2
SGA_v2.0_scaffold76G25079 Striga asiatica HOM05D009140 ORTHO05D000004 3.3e-06 55.5 72 33.3
Aa31sc56G70 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.2e-06 55.1 137 28.5
SGA_v2.0_scaffold214G42292 Striga asiatica HOM05D011272 ORTHO05D010636 4.2e-06 55.1 111 26.1
SGA_v2.0_scaffold142G35659 Striga asiatica HOM05D016777 ORTHO05D026198 5.5e-06 54.7 86 30.2
PSO223G0058 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-06 53.9 83 34.9
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.5e-06 53.9 85 24.7
RcHm_v2.0_Chr1g0346251 Rosa chinensis HOM05D000003 ORTHO05D000004 9.5e-06 53.9 85 30.6


User provided reference genes

Program Settings