Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 7.3e-119 430.6 227 100.0
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 2.0e-100 369.4 227 84.1
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 7.8e-97 357.5 227 81.9
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 4.3e-95 351.7 224 81.7
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 6.9e-93 344.4 257 72.8
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 2.4e-90 335.9 224 76.8
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.2e-89 333.6 224 75.9
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 1.2e-89 333.6 224 75.4
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 2.7e-89 332.4 223 75.8
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 3.5e-89 332.0 224 75.4
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 6.0e-89 331.3 224 75.4
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 1.3e-88 330.1 224 75.9
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 1.7e-88 329.7 224 72.8
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 2.3e-88 329.3 224 73.7
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 3.9e-88 328.6 224 75.0
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 3.9e-88 328.6 224 74.6
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 8.7e-88 327.4 224 75.4
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 8.7e-88 327.4 224 75.4
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 8.7e-88 327.4 224 74.1
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 8.7e-88 327.4 224 74.1
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 8.7e-88 327.4 234 71.8
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 8.7e-88 327.4 224 72.8
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 1.9e-87 326.2 224 75.0
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 1.9e-87 326.2 224 75.9
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 3.3e-87 325.5 224 72.8
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 3.3e-87 325.5 224 73.7
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 2.1e-86 322.8 224 72.8
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 2.8e-86 322.4 264 66.3
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 3.6e-86 322.0 224 73.2
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 3.6e-86 322.0 224 73.2
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 4.8e-86 321.6 224 72.3
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 8.1e-86 320.9 224 73.2
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 8.1e-86 320.9 224 71.9
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 8.1e-86 320.9 224 72.8
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 1.1e-85 320.5 224 72.3
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 1.4e-85 320.1 224 71.9
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 4.0e-85 318.5 224 72.8
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 4.0e-85 318.5 228 72.4
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 6.9e-85 317.8 224 72.8
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 9.0e-85 317.4 224 72.3
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 9.0e-85 317.4 225 72.9
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 9.0e-85 317.4 224 71.9
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 2.0e-84 316.2 224 72.8
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 2.0e-84 316.2 224 72.8
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 2.6e-84 315.8 222 72.5
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 3.4e-84 315.5 215 74.9
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 4.5e-84 315.1 224 71.9
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 7.6e-84 314.3 224 71.4
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 6.4e-83 311.2 227 70.0
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 1.1e-82 310.5 224 69.2
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 5.4e-82 308.1 224 69.6
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 2.1e-81 306.2 224 68.8
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 3.5e-81 305.4 224 71.9
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 4.6e-81 305.1 207 76.8
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 1.3e-80 303.5 224 68.3
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 5.1e-80 301.6 220 69.1
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 5.1e-80 301.6 224 68.8
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 5.1e-80 301.6 224 68.8
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 6.7e-80 301.2 224 68.8
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 8.7e-80 300.8 224 69.2
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 1.5e-79 300.1 207 75.4
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 3.3e-79 298.9 224 67.4
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 4.3e-79 298.5 224 67.4
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 5.6e-79 298.1 224 66.5
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 7.4e-79 297.7 224 71.0
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 9.6e-79 297.4 227 69.2
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 3.7e-78 295.4 224 66.5
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 3.1e-77 292.4 224 65.2
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 3.1e-77 292.4 224 64.3
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 3.1e-77 292.4 221 69.2
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 6.9e-77 291.2 224 67.0
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 9.0e-77 290.8 224 65.2
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 2.0e-76 289.7 202 73.3
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 5.8e-76 288.1 194 76.8
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.3e-75 287.0 241 63.5
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 3.8e-75 285.4 224 63.8
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 3.8e-75 285.4 224 67.4
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 1.1e-74 283.9 224 67.4
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.1e-74 283.9 220 65.9
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 1.1e-74 283.9 224 67.4
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 1.6e-73 280.0 224 62.9
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 1.6e-73 280.0 224 62.9
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.1e-73 279.6 249 58.6
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 4.6e-73 278.5 232 63.8
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 6.0e-73 278.1 224 65.6
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 7.9e-73 277.7 224 62.5
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 7.9e-73 277.7 224 62.5
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 7.9e-73 277.7 224 62.5
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 7.9e-73 277.7 242 63.6
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 1.0e-72 277.3 207 65.7
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 3.0e-72 275.8 224 63.4
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 4.8e-70 268.5 224 61.2
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 4.1e-69 265.4 224 62.9
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 6.9e-69 264.6 217 65.0
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 2.0e-68 263.1 214 65.0
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 3.8e-67 258.8 195 70.3
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 3.8e-67 258.8 210 64.8
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 1.1e-63 247.3 222 59.5
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 1.1e-63 247.3 222 59.5
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 1.6e-62 243.4 222 58.6
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 2.8e-62 242.7 222 56.8
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 2.6e-60 236.1 197 61.4
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 5.9e-60 235.0 224 58.0
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 5.0e-59 231.9 215 54.0
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 1.2e-57 227.3 207 55.1
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 1.1e-50 204.1 213 49.8
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 8.8e-48 194.5 184 59.8
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 5.7e-47 191.8 139 69.1
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 1.0e-40 171.0 196 46.4
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 1.6e-36 157.1 210 47.1
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 5.5e-34 148.7 97 74.2
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.4e-29 134.0 99 73.7
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.0e-27 127.9 163 49.7
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 5.6e-18 95.5 194 32.0
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 3.0e-16 89.7 220 29.5
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 4.3e-10 69.3 215 30.7
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 1.6e-09 67.4 129 43.4
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 8.9e-08 61.6 108 43.5


User provided reference genes

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