Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold123G33386 Striga asiatica HOM05D011272 ORTHO05D010636 7.2e-80 300.4 143 100.0
SGA_v2.0_scaffold37G14870 Striga asiatica HOM05D011272 ORTHO05D010636 5.4e-27 124.8 101 53.5
SGA_v2.0_scaffold80G25964 Striga asiatica HOM05D011272 ORTHO05D010636 1.7e-17 93.2 96 39.6
SGA_v2.0_scaffold17G08173 Striga asiatica HOM05D000003 ORTHO05D000004 2.3e-17 92.8 160 32.5
SGA_v2.0_scaffold450G51801 Striga asiatica HOM05D011272 ORTHO05D010636 8.6e-17 90.9 94 37.2
SGA_v2.0_scaffold5G03062 Striga asiatica HOM05D011272 ORTHO05D010636 8.1e-15 84.3 95 35.8
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-14 84.0 145 30.3
SGA_v2.0_scaffold11G05618 Striga asiatica HOM05D011272 ORTHO05D010636 1.8e-14 83.2 89 37.1
SGA_v2.0_scaffold214G42292 Striga asiatica HOM05D011272 ORTHO05D010636 6.8e-14 81.3 87 37.9
SGA_v2.0_scaffold206G41847 Striga asiatica HOM05D000254 ORTHO05D010636 1.2e-13 80.5 140 32.9
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 4.4e-13 78.6 148 31.1
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 9.9e-13 77.4 144 31.2
SGA_v2.0_scaffold59G20769 Striga asiatica HOM05D011272 ORTHO05D010636 1.3e-12 77.0 91 35.2
SGA_v2.0_scaffold118G32446 Striga asiatica HOM05D000003 ORTHO05D000004 2.4e-11 72.8 147 27.9
SGA_v2.0_scaffold6G03466 Striga asiatica HOM05D000003 ORTHO05D000004 2.4e-11 72.8 147 29.3
SGA_v2.0_scaffold163G37969 Striga asiatica HOM05D000003 ORTHO05D000004 5.4e-11 71.6 145 26.9
SGA_v2.0_scaffold63G21783 Striga asiatica HOM05D009108 ORTHO05D011557 1.2e-10 70.5 87 39.1
SGA_v2.0_scaffold10G05079 Striga asiatica HOM05D000003 ORTHO05D000004 4.6e-10 68.6 150 26.7
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 4.6e-10 68.6 146 27.4
SGA_v2.0_scaffold13G06590 Striga asiatica HOM05D011272 ORTHO05D010636 6.0e-10 68.2 85 35.3
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.8e-10 67.8 159 28.3
SGA_v2.0_scaffold72G24192 Striga asiatica HOM05D026623 ORTHO05D403235 1.3e-09 67.0 85 31.8
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-09 66.2 149 27.5
BcaC06g35181 Brassica carinata HOM05D000003 ORTHO05D000004 3.0e-09 65.9 132 30.3
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.0e-09 65.9 130 30.8
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 3.9e-09 65.5 127 29.9
SGA_v2.0_scaffold298G47693 Striga asiatica HOM05D000003 ORTHO05D000004 3.9e-09 65.5 141 25.5
BcaC05g25416 Brassica carinata HOM05D000003 ORTHO05D000004 5.1e-09 65.1 132 30.3
SGA_v2.0_scaffold232G43488 Striga asiatica HOM05D011272 ORTHO05D010636 5.1e-09 65.1 91 36.3
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.6e-09 64.7 130 29.2
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.6e-09 64.7 130 29.2
SGA_v2.0_scaffold13G06616 Striga asiatica HOM05D015799 ORTHO05D010636 1.1e-08 63.9 85 32.9
Aa31LG3G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-08 63.5 149 27.5
BcaC01g02801 Brassica carinata HOM05D000003 ORTHO05D000004 1.9e-08 63.2 132 29.5
BcaC09g48324 Brassica carinata HOM05D000003 ORTHO05D000004 1.9e-08 63.2 149 27.5
Aa31sc56G70 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.3e-08 62.0 151 24.5
SGA_v2.0_scaffold67G22642 Striga asiatica HOM05D000407 ORTHO05D000004 4.3e-08 62.0 132 31.8
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 7.3e-08 61.2 145 29.0
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.5e-08 60.8 144 27.1
BcaC03g18247 Brassica carinata HOM05D000003 ORTHO05D000004 9.5e-08 60.8 153 28.1
BcaC07g37731 Brassica carinata HOM05D000003 ORTHO05D001498 9.5e-08 60.8 113 31.0
SGA_v2.0_scaffold299G47717 Striga asiatica HOM05D000003 ORTHO05D000004 9.5e-08 60.8 135 28.9
TPR.G36801 Trifolium pratense HOM05D000003 ORTHO05D000004 9.5e-08 60.8 144 25.0
Aa31LG8G11190 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-07 60.5 150 28.0
SGA_v2.0_scaffold203G41506 Striga asiatica HOM05D015799 ORTHO05D010636 1.2e-07 60.5 98 30.6
SGA_v2.0_scaffold93G28364 Striga asiatica HOM05D009140 ORTHO05D010636 1.2e-07 60.5 89 33.7
TWI18G1127 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.2e-07 60.5 130 31.5
SGA_v2.0_scaffold3G01490 Striga asiatica HOM05D030754 ORTHO05D000004 1.6e-07 60.1 129 29.5
Atru.chr10.527 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-07 59.7 151 29.1
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-07 59.7 144 25.0
Aa31LG9G3910 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-07 59.7 150 26.7
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.1e-07 59.7 144 26.4
BcaB02g11015 Brassica carinata HOM05D000003 ORTHO05D000004 4.7e-07 58.5 148 27.0
BcaNung00858 Brassica carinata HOM05D000003 ORTHO05D000004 4.7e-07 58.5 150 28.7
SGA_v2.0_scaffold145G36011 Striga asiatica HOM05D009140 ORTHO05D010636 4.7e-07 58.5 111 29.7
RcHm_v2.0_Chr1g0328181 Rosa chinensis HOM05D000003 ORTHO05D000004 6.2e-07 58.2 144 27.8
SGA_v2.0_scaffold151G36752 Striga asiatica HOM05D018498 ORTHO05D011557 6.2e-07 58.2 76 38.2
Aa31LG2G12260 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.1e-07 57.8 145 27.6
CANSAT11G0402 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.4 157 29.3
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-06 57.4 151 26.5
Atru.chr6.485 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 56.6 147 28.6
Aa31LG1G9570 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-06 56.6 153 27.5
SGA_v2.0_scaffold2392G54112 Striga asiatica HOM05D000003 ORTHO05D000006 1.8e-06 56.6 100 30.0
SGA_v2.0_scaffold367G50060 Striga asiatica HOM05D000003 ORTHO05D010636 1.8e-06 56.6 75 33.3
TPR.G22130 Trifolium pratense HOM05D000003 ORTHO05D000004 1.8e-06 56.6 155 26.5
Aa31LG5G21260 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-06 56.2 151 24.5
BcaC05g25658 Brassica carinata HOM05D000003 ORTHO05D000004 2.4e-06 56.2 150 28.0
CANSAT56G4406 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 56.2 131 30.5
AUR62003108 Chenopodium quinoa HOM05D000003 ORTHO05D000004 2.4e-06 56.2 151 25.8
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 2.4e-06 56.2 129 27.9
SGA_v2.0_scaffold484G52346 Striga asiatica HOM05D000003 ORTHO05D010636 3.1e-06 55.8 87 34.5
TWI31G0724 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.1e-06 55.8 145 28.3
Atru.chr1.2485 Acer truncatum HOM05D000003 ORTHO05D000004 4.0e-06 55.5 150 28.7
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-06 55.5 144 26.4
Aa31sc23G110 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-06 55.5 149 26.8
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 4.0e-06 55.5 113 29.2
CANSAT54G1809 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-06 55.5 144 29.2
SGA_v2.0_scaffold34G13687 Striga asiatica HOM05D011272 ORTHO05D010636 4.0e-06 55.5 86 32.6
CANSAT01G1968 Cannabis sativa HOM05D000003 ORTHO05D000004 5.2e-06 55.1 145 26.9
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 5.2e-06 55.1 145 26.9
CANSAT78G1465 Cannabis sativa HOM05D000003 ORTHO05D000004 5.2e-06 55.1 153 26.1
SGA_v2.0_scaffold56G19898 Striga asiatica HOM05D000003 ORTHO05D010636 5.2e-06 55.1 91 31.9
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 8.9e-06 54.3 113 28.3
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 8.9e-06 54.3 125 25.6


User provided reference genes

Program Settings