Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 5.5e-189 664.1 322 100.0
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 8.3e-76 288.1 376 43.1
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 9.8e-69 264.6 369 40.4
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.6e-66 257.3 369 40.7
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.7e-65 253.8 369 39.6
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.7e-65 253.8 369 40.1
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 6.6e-65 251.9 371 38.5
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 8.6e-65 251.5 361 40.4
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 1.5e-64 250.8 378 37.8
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 4.3e-64 249.2 366 37.7
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 4.3e-64 249.2 377 37.4
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 5.6e-64 248.8 380 37.9
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 7.3e-64 248.4 334 40.4
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 1.6e-63 247.3 368 37.8
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 6.2e-63 245.4 363 37.2
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 2.0e-61 240.4 334 42.8
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 3.4e-61 239.6 367 37.6
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 5.8e-61 238.8 376 35.9
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 5.8e-61 238.8 376 35.9
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 2.2e-60 236.9 367 36.5
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 2.9e-60 236.5 367 36.5
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 3.7e-60 236.1 347 37.5
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 4.9e-60 235.7 368 36.1
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 6.4e-60 235.3 371 35.8
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 8.3e-60 235.0 370 36.2
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 8.3e-60 235.0 370 36.2
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 8.3e-60 235.0 369 36.9
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 2.4e-59 233.4 369 35.8
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.2e-59 233.0 344 38.7
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 5.4e-59 232.3 371 37.7
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 5.4e-59 232.3 369 36.6
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 9.2e-59 231.5 378 35.2
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 1.2e-58 231.1 366 38.3
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 1.6e-58 230.7 369 37.9
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 2.0e-58 230.3 374 35.8
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 6.0e-58 228.8 377 35.5
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 1.7e-57 227.3 377 35.3
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 2.3e-57 226.9 367 36.8
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 2.3e-57 226.9 368 36.1
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 8.6e-57 224.9 371 35.0
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.5e-56 224.2 364 35.2
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 7.3e-56 221.9 370 36.2
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 2.8e-55 219.9 358 38.0
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 2.8e-55 219.9 348 35.6
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 3.6e-55 219.5 350 37.7
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.1e-54 218.0 244 47.5
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 1.1e-54 218.0 375 34.1
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.8e-54 217.2 380 34.7
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 2.0e-53 213.8 364 34.6
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 3.4e-53 213.0 261 43.7
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.3e-52 211.1 370 33.8
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 6.4e-52 208.8 352 34.4
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 8.3e-52 208.4 366 33.9
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 5.4e-51 205.7 370 32.2
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 1.6e-50 204.1 352 35.2
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 7.8e-50 201.8 259 40.9
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 2.3e-49 200.3 268 40.7
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 1.2e-47 194.5 364 32.1
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 1.2e-47 194.5 268 41.0
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 1.8e-46 190.7 266 39.5
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 6.8e-46 188.7 226 43.8
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 4.4e-45 186.0 236 44.5
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 3.0e-41 173.3 284 37.7
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 8.6e-41 171.8 236 40.3
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 1.1e-40 171.4 318 32.1
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 8.1e-39 165.2 218 39.0
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 1.5e-37 161.0 370 29.5
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 2.1e-31 140.6 132 51.5
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 3.6e-31 139.8 135 51.9
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 2.0e-29 134.0 264 33.0
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 6.4e-28 129.0 128 51.6
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 1.4e-27 127.9 352 25.0
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 2.4e-27 127.1 359 25.6
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 5.4e-27 125.9 84 67.9
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 2.1e-23 114.0 353 23.2
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 1.2e-18 98.2 283 26.1
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 1.2e-18 98.2 88 53.4
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 7.4e-16 89.0 263 27.0
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 1.4e-14 84.7 155 32.3
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 1.7e-12 77.8 91 42.9
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 2.3e-09 67.4 181 27.6
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 3.1e-06 57.0 41 53.7


User provided reference genes

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