Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32965 Striga asiatica HOM05D000782 ORTHO05D000571 2.1e-163 578.9 287 100.0
SalBow2G3499 Salvia bowleyana HOM05D000782 ORTHO05D000571 4.0e-37 159.5 206 46.1
Oeu050028.1 Olea europaea HOM05D000782 ORTHO05D000571 7.5e-36 155.2 239 42.3
Migut.N00751 Erythranthe guttata HOM05D000782 ORTHO05D000571 1.3e-35 154.5 201 46.3
Sabra19G0124100 Salix brachista HOM05D000782 ORTHO05D000571 7.5e-28 128.6 195 39.5
MSTRG.12694 Avicennia marina HOM05D000782 ORTHO05D000571 1.4e-26 124.4 235 37.4
Duzib168G2101 Durio zibethinus HOM05D000782 ORTHO05D000571 7.7e-25 118.6 201 36.3
Cc01_g15010 Coffea canephora HOM05D000782 ORTHO05D000571 1.7e-24 117.5 239 35.1
Gohir.A03G024700 Gossypium hirsutum HOM05D000782 ORTHO05D000571 1.1e-23 114.8 192 38.0
Sabra19G0130500 Salix brachista HOM05D000782 ORTHO05D000571 1.5e-23 114.4 195 36.4
Gohir.D03G143800 Gossypium hirsutum HOM05D000782 ORTHO05D000571 1.9e-23 114.0 195 36.9
Gorai.003G151100 Gossypium raimondii HOM05D000782 ORTHO05D000571 3.3e-23 113.2 195 36.9
Ciclev10002580m.g Citrus clementina HOM05D000782 ORTHO05D000571 5.5e-23 112.5 208 33.7
vmacro02905 Vaccinium macrocarpon HOM05D000782 ORTHO05D000571 5.5e-23 112.5 250 32.8
TAR369G0987 Trochodendron aralioides HOM05D000782 ORTHO05D000571 7.2e-23 112.1 201 35.3
Actinidia32599 Actinidia chinensis HOM05D000782 ORTHO05D000571 9.5e-23 111.7 194 36.6
Solyc06g082380.3 Solanum lycopersicum HOM05D000782 ORTHO05D000571 1.2e-22 111.3 224 32.6
PGSC0003DMG400030460 Solanum tuberosum HOM05D000782 ORTHO05D000571 1.6e-22 110.9 221 33.5
Sopen06g033770 Solanum pennellii HOM05D000782 ORTHO05D000571 6.1e-22 109.0 224 31.7
Atru.chr1.2094 Acer truncatum HOM05D000782 ORTHO05D000571 8.0e-22 108.6 197 35.5
Glyma.14G200600 Glycine max HOM05D000782 ORTHO05D000571 3.0e-21 106.7 199 34.7
Thecc.09G359700 Theobroma cacao HOM05D000782 ORTHO05D000571 3.0e-21 106.7 204 31.9
GSVIVG01024611001 Vitis vinifera HOM05D000001 ORTHO05D012572 3.0e-21 106.7 200 34.5
Dinv12248 Davidia involucrata HOM05D000782 ORTHO05D000571 5.2e-21 105.9 198 35.9
Rhsim13G0062600 Rhododendron simsii HOM05D000782 ORTHO05D000571 6.8e-21 105.5 194 35.6
ClCG03G000180 Citrullus lanatus HOM05D000782 ORTHO05D000571 8.9e-21 105.1 200 36.5
MD03G1058200 Malus domestica HOM05D000782 ORTHO05D000571 1.2e-20 104.8 206 33.0
CSS0014731 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 1.5e-20 104.4 228 32.0
Hma1.2p1_1421F.1_g282460 Hydrangea macrophylla HOM05D000782 ORTHO05D000571 2.6e-20 103.6 218 35.3
Sed0021709 Sechium edule HOM05D000782 ORTHO05D000571 3.4e-20 103.2 201 33.8
Prupe.6G045600 Prunus persica HOM05D000782 ORTHO05D000571 4.4e-20 102.8 215 33.5
MD11G1060400 Malus domestica HOM05D000782 ORTHO05D000571 5.7e-20 102.4 220 31.8
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.7e-19 100.9 209 34.4
CAN.G1095.28 Capsicum annuum HOM05D000782 ORTHO05D000571 2.2e-19 100.5 250 29.2
COL.COLO4_11173 Corchorus olitorius HOM05D000782 ORTHO05D000571 2.2e-19 100.5 195 34.4
TAR623G1242 Trochodendron aralioides HOM05D000782 ORTHO05D000571 2.2e-19 100.5 192 35.4
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 2.2e-19 100.5 207 36.2
Glyma.02G233000 Glycine max HOM05D000782 ORTHO05D000571 3.7e-19 99.8 203 33.5
MD17G1185800 Malus domestica HOM05D000782 ORTHO05D000571 4.9e-19 99.4 203 34.0
FAN25G1963 Fragaria x ananassa HOM05D000001 ORTHO05D012572 6.3e-19 99.0 195 33.8
QL01p025713 Quercus lobata HOM05D000782 ORTHO05D000571 6.3e-19 99.0 188 33.0
TAR623G0287 Trochodendron aralioides HOM05D000782 ORTHO05D000571 6.3e-19 99.0 191 35.1
TPR.G25342 Trifolium pratense HOM05D000782 ORTHO05D000571 1.1e-18 98.2 185 33.5
FAN16G3647 Fragaria x ananassa HOM05D000001 ORTHO05D012572 2.4e-18 97.1 220 32.3
Manes.18G126600 Manihot esculenta HOM05D000782 ORTHO05D000571 2.4e-18 97.1 207 30.9
DCAR_023953 Daucus carota HOM05D000782 ORTHO05D000571 3.2e-18 96.7 262 29.8
FvH4_3g39960 Fragaria vesca HOM05D000782 ORTHO05D000571 3.2e-18 96.7 209 33.5
ClCG08G003160 Citrullus lanatus HOM05D000782 ORTHO05D000571 7.0e-18 95.5 188 32.4
MBI15_g20019_MAGBIO Magnolia biondii HOM05D000782 ORTHO05D000571 7.0e-18 95.5 208 32.7
Phvul.008G250800 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 9.2e-18 95.1 200 31.5
Psat0s2794g0120 Pisum sativum HOM05D000782 ORTHO05D000571 9.2e-18 95.1 193 30.6
RcHm_v2.0_Chr5g0071971 Rosa chinensis HOM05D000782 ORTHO05D000571 9.2e-18 95.1 207 31.9
Lsat_1_v5_gn_8_108720 Lactuca sativa HOM05D000782 ORTHO05D000571 1.6e-17 94.4 227 33.0
QL04p095962 Quercus lobata HOM05D000782 ORTHO05D000571 1.6e-17 94.4 188 33.0
Haze_24431 Corylus avellana HOM05D000782 ORTHO05D000571 2.0e-17 94.0 200 32.5
Medtr5g074550 Medicago truncatula HOM05D000782 ORTHO05D000571 4.5e-17 92.8 194 30.9
QL04p095983 Quercus lobata HOM05D000782 ORTHO05D000571 4.5e-17 92.8 188 33.0
FAN21G0593 Fragaria x ananassa HOM05D000782 ORTHO05D000571 7.8e-17 92.0 203 33.5
Gohir.D08G221000 Gossypium hirsutum HOM05D000782 ORTHO05D000571 7.8e-17 92.0 194 33.0
Gorai.004G234700 Gossypium raimondii HOM05D000782 ORTHO05D000571 7.8e-17 92.0 194 33.0
Cpa.g.sc2.336 Carica papaya HOM05D000782 ORTHO05D000571 1.0e-16 91.7 210 31.4
Gohir.A08G203700 Gossypium hirsutum HOM05D000782 ORTHO05D000571 1.0e-16 91.7 194 33.0
Ca_05681_v3 Cicer arietinum L. HOM05D000782 ORTHO05D000571 1.3e-16 91.3 196 32.7
VMungo0647G1733 Vigna mungo HOM05D000782 ORTHO05D000571 2.3e-16 90.5 200 30.5
SalBow6G0271 Salvia bowleyana HOM05D004269 ORTHO05D000571 6.6e-16 89.0 68 61.8
TWI79G1409 Tripterygium wilfordii HOM05D000782 ORTHO05D000571 6.6e-16 89.0 206 34.0
MELO3C024977.2 Cucumis melo HOM05D000782 ORTHO05D000571 8.6e-16 88.6 201 29.4
HanXRQChr11g0339921 Helianthus annuus HOM05D000782 ORTHO05D000571 4.3e-15 86.3 223 31.8
CsaV3_7G022830 Cucumis sativus L. HOM05D000782 ORTHO05D000571 9.5e-15 85.1 198 29.3
Aa31LG5G6450 Aethionema arabicum HOM05D002411 ORTHO05D002564 1.6e-14 84.3 188 33.0
Eucgr.K01367 Eucalyptus grandis HOM05D000782 ORTHO05D000571 1.6e-14 84.3 192 31.2
AL4G25120 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 2.1e-14 84.0 205 33.2
BraA03t10980Z Brassica rapa HOM05D000782 ORTHO05D000571 2.8e-14 83.6 205 31.7
A03p16910 Brassica napus HOM05D000782 ORTHO05D000571 3.6e-14 83.2 205 31.7
CARHR123590 Cardamine hirsuta HOM05D000782 ORTHO05D000571 3.6e-14 83.2 188 34.0
LjContig00141g0026997 Lotus japonicus HOM05D000782 ORTHO05D000571 8.0e-14 82.0 206 28.6
Thhalv10017277m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 1.0e-13 81.6 206 31.1
AT2G30270 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 1.4e-13 81.3 205 33.2
Potri.019G126300 Populus trichocarpa HOM05D000782 ORTHO05D000571 2.3e-13 80.5 178 34.8
BcaC01g06019 Brassica carinata HOM05D000782 ORTHO05D000571 3.1e-13 80.1 205 31.2
ECA236G0449 Erigeron canadensis HOM05D000782 ORTHO05D000571 3.1e-13 80.1 228 32.5
CANSAT54G1735 Cannabis sativa HOM05D000782 ORTHO05D000571 6.8e-13 79.0 207 27.1
CiPaw.14G053200 Carya illinoinensis HOM05D000782 ORTHO05D000571 6.8e-13 79.0 196 30.6
C03p19910 Brassica napus HOM05D000782 ORTHO05D000571 1.2e-12 78.2 205 31.2
BolC3t14370H Brassica oleracea HOM05D000782 ORTHO05D000571 1.2e-12 78.2 205 31.2
Lj2A1095G46 Lonicera japonica HOM05D000782 ORTHO05D000571 1.5e-12 77.8 248 29.4
Medtr5g074560 Medicago truncatula HOM05D000782 ORTHO05D000571 2.6e-12 77.0 192 28.1
Sp4g12850 Schrenkiella parvula HOM05D000782 ORTHO05D000571 2.6e-12 77.0 201 33.3
Carub.0004s1143 Capsella rubella HOM05D000782 ORTHO05D000571 2.9e-11 73.6 188 32.4
Nitab4.5_0003270g0030 Nicotiana tabacum HOM05D000782 ORTHO05D000571 2.9e-11 73.6 172 30.2
PSO170G6702 Papaver somniferum HOM05D000782 ORTHO05D000571 2.9e-11 73.6 205 29.3
TAR623G0969 Trochodendron aralioides HOM05D000782 ORTHO05D000571 2.9e-11 73.6 70 48.6
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 3.7e-11 73.2 187 29.4
Sc21g0004900 Simmondsia chinensis HOM05D000782 ORTHO05D000571 6.4e-11 72.4 197 27.9
Lalb_Chr10g0103661 Lupinus albus HOM05D000782 ORTHO05D000571 1.1e-10 71.6 199 29.1
Nn2g11061 Nelumbo nucifera HOM05D000782 ORTHO05D000571 1.1e-10 71.6 206 28.6
Peaxi162Scf00390g00530 Petunia axillaris HOM05D000782 ORTHO05D000571 1.4e-10 71.2 180 27.8
THA.LOC104800764 Tarenaya hassleriana HOM05D000782 ORTHO05D000571 1.9e-10 70.9 203 26.6
HPP92_001136 Vanilla planifolia HOM05D000782 ORTHO05D000571 2.4e-10 70.5 191 28.3
Aqoxy4G02166 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 5.4e-10 69.3 197 25.4
AUR62009715 Chenopodium quinoa HOM05D000782 ORTHO05D000571 1.2e-09 68.2 187 28.3
Ah.08g215420 Amaranthus hybridus HOM05D000782 ORTHO05D000571 6.0e-09 65.9 188 27.1
SHI19227 Sapria himalayana HOM05D000782 ORTHO05D000571 1.0e-08 65.1 105 36.2
CiPaw.13G067500 Carya illinoinensis HOM05D000782 ORTHO05D000571 2.3e-08 63.9 193 26.4
arahy.Tifrunner.gnm1.ann1.NRMQ9K Arachis hypogaea HOM05D000782 ORTHO05D000571 3.0e-08 63.5 202 25.2
arahy.Tifrunner.gnm1.ann1.89W0PE Arachis hypogaea HOM05D000782 ORTHO05D000571 6.6e-08 62.4 199 26.1
Nitab4.5_0002768g0070 Nicotiana tabacum HOM05D000782 ORTHO05D000571 8.6e-08 62.0 69 43.5
EL10Ac7g15871 Beta vulgaris HOM05D000782 ORTHO05D000571 9.5e-07 58.5 188 26.6
SEGI_38654 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 3.6e-06 56.6 82 36.6


User provided reference genes

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